XLOC_006266 (gene) - C. hemisphaerica

Overview
NameXLOC_006266
Unique NameXLOC_006266
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000122:154073..158098+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006266 ID=XLOC_006266|Name=XLOC_006266|organism=Clytia hemisphaerica|type=gene|length=4026bp|location=Sequence derived from alignment at sc0000122:154073..158098+ (Clytia hemisphaerica)
TGGATAGCAAGTTTTGAAGGTTGTTTTGGATTTCAAGactgagatttttt
ttcgctCGTGTGTTTTTATTGACTTATGGTCACGTGTCAGAGAGTGGTTA
AGAGATTGGTTTCAGCTGGTGTTTGTAGCTTATGACGTATACGTTCGATT
TGAAAAACATTCGATTGAATAAAAGTGTTGCATGCCCCCAATCGAATGTT
TTCGAATTCGAACGTTTCACAAGGGTTCGTCTACACGTCAAGGCCGTTTT
TGTAGGTACAAAACATTGATATCATGTGAACCAGGCCTTAGACTTGCATT
CCAAAAGAATGAATGAAGACGTGATCACCTTTCTTTCAATGATCATTTAT
TGAATGACAAGCAAAGAGTCAACAATAAAAACGCAAAACTCCTATCACAA
CGTCaacatgaaagatatttttcagAAAGTATCACCCGCCACGGGAAAAC
CTTCAACTGATATGACTAATATCCACAAAGAAATCACTATTGATAATCGC
ATCTTTTTGAAAGGATTGAGATTGGACACTAAGGAAGaagatttggaaaa
tattttcaaaacgtACGGAGCTATCGTTGAAACGAAAATTATTCGTGATA
ATTTTGATGGACGAAGCAAAGGTTTTGGATTTATCACTTTCGATAGTCAA
CAAGTTGCACAAGATATTTTACGTGATGTCCAATCTATTCAAACTGATGA
TATGGAAATCACGATCGCACCCGCTAAAATGAAACGCCTTCCACCTCAAG
GTATAAATTTGTTTGttacctactctcgggtacctaatagccgggggggc
ccgaaaattttccacccaggacattcttattccaaccccccgcttattga
tttttgggaaaattttttttgaaagttccctcttttgccctaattctgct
gtatcagcctccttttcgaacattttccacccaggacatttttattccaa
ccccccgcttattgatttttgggaaaattttttttgaaagttccctcttt
tgccctaattctgctgcatcagcctccttttcgaacattttccacccagg
acatttttattccaacccccccgcttattaaattttgagattttttccaa
cccccctgcttattccaaaccccccggctattaggtacccgagagtatgc
cCTATGGATTTCTTTACAACTGATTAACTtccgtgaaaatgaataaaaaa
aacttttaaaaaatcaatGCGAATTTTTCAAACCTTTGTCTCGTTAAAAT
ATCTCTTTTGTGAGAAGTGTTTATCTTCTATATTGTGCACTACTTAAAGT
CTCATGATTAACATAGAGTTAATGCTAGGAAGAACTATCAACAGATTGTT
ATACATTCGTGGTGTTTAGAATTGTGATACGAATCATTTTCGAATTTGGA
AGGTTTAAATTGTTAGATTTAAATAATCAAATAATTACCGATCTATTTTT
TTCAGGCAAATCATTCCGCAACCGACATGTCCCATTCTCACATCAGCCGA
TGCACCCGCAACAAAACTTTATCCCCGTCAACACTCCAATGGCTCCGCAA
TACTACTCCATGCCTTGCGTTGTTTCACCAGACGGCTTGTTCACATGGTA
CCCCAACATCCCAACCTACCAGCAGAAAACATATCCCGAAATCATCTACC
CAGACGCTAACATGGACCCTAACCTCGTTCCCATGTTATCACCTCCTGAC
TCACCGAATTCATCCAACATTTCGAACGAAAACAAAACCAACAACTCTGT
TGAATCAAACTCCAATAATATCTACTCACCGACCAGCAAATACGACTCGA
ACAATTTCCAACCACTTCAACCTTTACCTCAAACACCTAATACGAACCAA
CAGTTGACTGAACTCACACCAACCATCATCAACAATCAAAACATGGTCGA
TAATCAACAAAACGAATTCAACAAATCGAACACTGGTTTACCACCAACAA
CTAATGCCGGTAATGGCGTCTTTCAAAATCTTCTACCATCTTCAACCGAG
ATTGTCCACCTCAACAATGGCTACCTTTATCCGCAAAATGCATTTTTACC
TCAAAACACCAACTTCGTTAACGCTTATCCTCACCCTCAGCCATTAGCGC
CGCTCAATTCCACCAACAACAAATTGAAACCGTCTCCAATTTTCTTCAAC
GGCGTACCACTTTATGATAACGCCCCAACTCCACCTTCAACGCCCACCAC
CCCTAATCCCCCAATGGAAATCAACGTCATTACTTCAGACATGAAGAATT
TGGTCGTTCAACCAAGTTTCCAACGCATCCACATTCCAGCTCCCAACTCT
ACAGACCTGAAACCGGAAATCACAAACGCCACAAACGATAACACCGCCCC
ACCCTCTTTTCCATCGCCACCTGTCAAATCGCTGGGTAACAGCCTTCCAG
CATATCCTACACCACCCACCAAAGTGGCACCGCCACCCCAACACGCCACA
GAAGTGGTCAACAGCCAACAACAAAATGGTGATTCGATGCCTttgaaaac
acaaaattttgttttcatgtctacTGCGCCTGGTAAAGTCAATCGCGTTG
TCGTTCACTAATTTGAATGAATATTGATTTGGATTTAAACGGTACTGGAA
TCTGGATTTTATTTGATAACTTTTAAGATTTGATATGATTTGATGTGTTT
TGATNTAATAATATCTACTCACCGACCAGCAAATACGACTCGAACAATTT
CCAACCACTTCAACCTTTACCTCAAACACCGAATACGAACCAACAGTTGA
CTGAACTCACACCAACCATCATCAACAATCAAAACATGGTCGATAATCAA
CAAAACGaattcaacaaatcaaacactGGTTTACCACCAACAACTAATGC
CGGTAATAGCGTCTTTCAAAATCTTCTACCATCTTCAACCGAGATTGTCC
ACCTCAACAATGGCTACCTTTATCCGCAAAATGCATTTTTACCTCAAAAC
ACCAACTTCGTTAACGCTTATCCTCACCCTCAGCCATTAGCGCCGCTCAA
TTCCACCAACAACAAATTGAAACCGTCTCCAATTTTCTTCAACGGCGTAC
CACTTTATGATAACGCCCCAACTCCACCTTCAACGCCCACCACCCCTAAT
CCCCCAATGGAAATCAACGTCATTACTTCAGACATGAAGAATTTGGTCGT
TCAACCAAGTTTCCAACGCATCCACATTCCAGCTCCCAACTCTACAGACC
TGAAACCGGAAATCACAAACGCCACAAACGATAACACCGCCCCACCCTCT
TTTCCATCGCCACCTGTCAAATCGCTGGGTAACAGCCTTCCAGCATATCC
TACACCACCCACCAAAGTGGCACCGCCACCCCAACACGCCACAGAAGTGG
TCAACAGCCAACAACAAAATGGTGATTCGATGCCTttgaaaacacaaaat
tttgttttcatgtctacTGCGCCTGGTAAAGTCAATCGCGTTGTCGTTCA
CTAATTTGAATGAATATTGATTTGGATTTAAACGGTACTGGAATCTGGAT
TTTATTTGATAACTTTTAAGATTTGATATGATTTGATGTGTTTTGATGCT
TTGAACTTTAAATTTTCTCTATATTAGAGAGTCTTTATCCCTCAAATGAA
TGTAgacatttttattgaatttttttgggTTCCTCTGTACAATCAACTTA
ATGTTTGTGCAGTGAGCTGTAATTTGTGTGTTATTTTTTGTATATAAGTT
TACGTGCTGTGCtgtctttttattgaaaaaatacacatttttatgaTGTG
GTATttatttttaggattattttaTTTACCCAACCCCGATTTCTCGGGTA
CAcacttttttgtttataagaacaatttttttgagaacaCCAGCCTCAGA
ACAATAgtaaattaagaacaatctgaggcTCAACcgaaatttactggttc
ttataaaaaaataagcgtGTAGAAGCTCATTTTAGGAGTTTTATCATTTG
TTTCGATTTTGGAAGTTGACCAAAACCTACTactaaatttctttcaaaat
aaattcttcGAATTGATGAAAGCCCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011183TCONS_00011183Clytia hemisphaericatranscript
TCONS_00011184TCONS_00011184Clytia hemisphaericatranscript
TCONS_00011185TCONS_00011185Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011185-proteinTCONS_00011185-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122supercontigsc0000122:154073..158098 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.16	0.09	0.1	0.07	0.29	0.24	0.28	0.67	0.31	0.28	0.44	0.4	0.19	0.14	0.31	0.18	0.14	0.12	0.28	0.41	0.33	0.62	0.1	0.35	233.37	217.75	0.34	0.17	0.27	0.12