XLOC_006265 (gene) - C. hemisphaerica

Overview
NameXLOC_006265
Unique NameXLOC_006265
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000122:145073..153359+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006265 ID=XLOC_006265|Name=XLOC_006265|organism=Clytia hemisphaerica|type=gene|length=8287bp|location=Sequence derived from alignment at sc0000122:145073..153359+ (Clytia hemisphaerica)
TCTTTCAGTGATaacaaaaaatggtaaatttaaCACAACAATTTTTGGCG AGAAGACAAACAATTATCTATGGtgtgaaaagaggaaaaataccTCTAGC CTTGAGGCCAACTGTGCCACCGCAGACCAAGCAAGCAGGAAGTGAGTTTA GCTTTTATTTGAGAGATCGAAACGAAAACTAAACATTTTTCGGGTTTTCG AACCTTTTTGGACTTcgattgaaagaaaaacaaccatCTCAGGTTGAATG GAGTGGACAAAAATCAATTATGATTTTGAACTTACATTTAGTCAGTTGGC ATGGTagctttttttttgttaataagTGCTAGCGTTAGGGCTTCTTTTTT CACACTGATTTGGCTTGGGACCTATTAATCCGAATTAATCTAAGAGTTGC AAAAAAACGAATCAGCTATCTGAACAAAATCAACGTGAAATCTCTAGGGA AGGCTCGATTATTCATATCAAAACtcgatttttcatgttttaaatttgtt attttttcccCACGAATAATTTTAACTGAGACAAGTTTTAGCTTTTTGCT CCAGATAATTTTAACCTAGGCAAGTCCGAACTTTCCATGGAACAAATTTC TGGAGATGTTTTCCCGGAATGTGTAGGAACGGTCACACAGCCTTTGCTAT TATctagtttatgtatcggaggatgtcgagggcgacggtaagtaaaatcg atacaaaacaaagttgatagttgatgtacggctctatatcgtcTTTGTTC ACCTAAATAGACGacagtattttggtgtttttaccgtcgtcgagcaaagt ggacggtgattttggagacatattaactttgctttataccgtccccctcg tagactggagtcgtttataatgcgtgtaatactaataataccaatactaa taataataatacgggatttagtttgtataaacgactggaagaatccggtg ttccaggcTTATAGATACCccgcctagctacgcagaaacttgcgtagcga gaaaacaatttatcaagcaacaacaaactctcaaaacgaaatcaactcaa atgaaaaactttcaatacacaaatccacNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagtgcacaaaggtttctaga cgactaaaattgttccattcattactttttgctttatttctactatgtat aaattagtcgtctagcttgctagactatccccctcgatttatctcgaata cataaactcgcgagtaccttatcggggaaaacttcgtcggggaaaagtga cgaaattttggaaaagggacgaatattttccccgacgaaaattttccccg gccttaatgcgtttaccaactaccagcaagtgacgaatttttccctgacg agaattttccccgataaggtatcatCTAGTAACATTAATCGAGACACTAA TAACTAATTATTTCTGCTGATTGAATTTTAGATCCAACGTGTCTTGATGA GATGTCTCGTTTATTCAACTGTTGGTCTGCTTCATCGTTCGAAGATGGCA AATGTGGTAAAGAAATTGCCAACTTTTTAACTTGTGCTGATAAATCGGTA AGCACTAGATTTCAAAACAATCGTATgcgtaccttaagggaagaaacttT TGCGGAAATTAATTTCGcagttttttgacaaatccgcGAAACTAAATCCC GCAAAACACGaattctcaggatttaaaaaaatcacctctaaaattggTCT ATTTAGGGCGAAATAGGCAATATTGTAACAAAAGAATTCTCTCAAGCAcg gaaatttcttcccttaaattAAAGTATGTCATTTTTTGTAGCAGACTTTA AAGTGGAAAGCcctaagtggattaattttcgcctggaattttttttcgcg aattGAGAATCCAAATTAATTACACGGACAAAATTTCGCAAATCGGACTT TTCTTTCAtcgtttttggccaaaattcggattttgaatatttcgcgacga caaattttcgcgaaaatggccaaaattcacgaaaattaaTTCACGCGAAA TTCAAGGTAAAACATTGCCCATTTGTAGGAGATTTTAGAGTGGGTAAAAC ATGGAACCCATCCATGAAGTACTCCATTGTTGTACCTATTGGAGTACCCT AAATAATTCACAGGCCAGAATAGAAAACTTGTTATTTGAATATCAACGAC CAACAATGAAACTTATAAATGTCAATTCTTCAAAGTGTAACTAGAGTTTT TTGTGATATTGCTTTAAGCATGCTTTTATTTCCAAGTGAGTTTTATTCTT TGCAGATATCATATTTTGAGAATGTAACATTATTTTAATAGATGATCATA TTGTCTATGGCAAGCGAAAATcacaatttcgagaaaaactagGTTTTTCT GCCAAAAACCTGGTTTTTCGGGTGAAAACCCTAGTATTTCTAAAGGAGAC ACAAGACCtcagaaaattcaagttttttgATAGAACATGTCTCCTTTGCT CAATGTTGTTTTGATGAATTACTAAAAGACAAGAAATCTCGGTTGACGAG AGATaagatttggaaatacttatagaacgacaaaaaagacgggggtaatt ttattataatatgggtaaaattgccccttttttaacctgactgaaattcg agccgttactagcaaccctgcggggcccaaggcgccgagtatgcacccgg cacagtgacaagccgttactagcaacgctgacctaagcaattccaaacaa caaaacccccggaaaatttaaaatgtcggaatgagcaatagacaaacATA ACCTTgaatttctggaaaaaaaagaCCAATACGCTTCTTTTCAGAAAATC TAATTTACTTATTCGAATTTTACGGCAGACGATTTTTCGATATTAAAAGC GACCATTTAAAAGTGCGATTGACAAACCTGAGTTTTCTCTTGAAAATTTA TAAGCTCCGGGAAAACCGGGAAAACcccttcttaggggcatcctTACCCT GAGACCTaaccttgtaggggcaccggtagagttgggagctttcttaataa aggtctgtaaattacacgctataagtatttgtgaatgaaagTTTTTGTCT TGTCTCGTTGGCGcaagcggttaggcattgggtttgtaaaccaaggttgc ttacatttggtggttcgagccggggttgGAGACCAATTCACTGGTACggg aaaatttcagaaaaatacttagaaaacagttagaaacgcTTGAGAAAGTC ATAGAAAATCttgatagaagataggaaagttgaaaatagggggaaaataa aagggatgcatcctggtggatgatatcgtttgccaaccgaACAGTTTAGG AGGcggaataaatttgaaaacggtgATTAGCCCGgggcggaggtgtttac agtgtttacttcgaataaccgggagtttGAATAACTAAAAATATCCGTTT TCCCTGTCAGAGCGCTAGACGATTTTACCGCTGGGATTTTACAGGGAAAA TGAAAGATTTCTAAAATCTGATATCTCGTGTGTTTTCATGTTCTGGAATC AATTGATTTAAATCTTCCAATATCATTAATTCTGTTATTTCAAGCTTCTA GGGCATAAAAAAGGGTactccatgttttacaacgacccCTTCAGAGAACG TGtttaaaattcatgatatgcatgcACCACGCACCACTGGAGAGTTTTCc gagaacttttaaaaattttcacccaatacgtcacttaaacaatagaaaaa gtgacgtattgggtggaataaaaacagaaaagttgcataatttcgtgaag tcattgcagtggtgcatatcatggaaTGTATGGTATGGAAAATCGAATTT ATGTAATATAACAAATTGATGACATTATTTTGCATATTAcataaaaagta atacatgatGTTATAGCAGTTTATTAATACATAATAAGAATATCAATAAT AGCATCTTGTACGATGGATCTGAGGGAGAATTTCCTCTCCATTTCAAATT CTCTTTTCcttttaaaacaaacaataggttctattgtttaacaaaaggag aagtgaatttcaaaaggagaatttttttcaccttttgtcaaaaggagaat tattttcaccttttgtcaaaaggagaattattttcaccttttgtcaaaag gagaattttttgcACCCTTtgtcaaaaggaaaatttttttatcgcctgga ttttggatttttagacGAGTCATGCATTTTAACCTTGAATTTTAACCTTA ACCTTAATCGTGAGTTGATGAGGAAAAGTTTAGTATTTCCCGTTGTCTTC GGACAAACTTTAATCTGGCATATACTAAAAGACGGATCGATGGATCAACG GATCGACGGATTACTAAAACACGGATCTGAAGGCGTTTGTACGAAAACCA TGCGGGCCGCGCAACTTATGTAGAAAACAATTTGCTTCAAATTCTATATA GGAGGTTCACTACTATCATTCGGCTTTACTTCATTTTTCCCTCCTCACTC TAAATGCGGTCCGTTTTGTTTTTGGGAAATCTAATAAAGGTTATCATGTC ATGGCCTGGCTATTAGCTAGTACTGTTCATATTCAACACGAATGATTGTC CACACACGTGTGCATTCCCTTAGAANTTTCATTAAAAGGAacggagaaat tttgaaaaagagaataaaaccGCTTTCAGAGCCATCGTAATCTTGCCTGT TTGTTTGTTTCCCCCATCATAGAGGCTCCCCaagcggtaactctgatcac gatatcaagCAATTTTTGGTCTTCAATTTGGACTTGGATGATCaggcatc cctttgaaaaaagtccaaatcacgtcaCGTATCACTATTTaaagatcttt caaatcacgataacgttttgacctctgatcacgtaatcaagaaaaaaaag gtTCAAATCACGTAAATCACGCTATTGAAAAGTACCAagaaaccattaaa aagcaaaggAATTGAGTCCGGTCACAAATTCTTGAAATctttttggctaa aattttttgggaaaagtcTCTCTACTAAGGGTggaaaaaacgttaaaaaa atggacaacaatttcgaaattcaatatctctaagggtcgattttcgaact ttcgtCCGGACATACCCttcatctcgcaaacctagtacccccgggaGGGG GCACTGGCCTTGACGGCCGATGGGGACGTGCCGTTGGAGTTtgaaccctg tcagatatgattgtttggtaaatttgggaccctatCGGTAGGAAAATCAT TTTcacccattttcaccctgaaaagtggcaaagatgacaaaatgtagaca aaagattgaaagtttttctaatgtcaaaaaataaccaaaagacgACCCTA TCATCAGGTACTAATGTTGACATTAGTAAATTTGttaccctgtcagatat cttcagagcctagaaaagggaccctgaccagcggcacgtccccgttcCCA ATTTCGCCTGAGTGCCTCCACCGGGCTAGTACCGGTGTTTTTAATCCGCG GATACAGCCATAATCAGCCATAACCACCCATAATCACCTATAATCAGCAA tcggctaccccattggctgtTTTTTCGTATATAAAGGAATGCACTTGCTT GTAAAATCATTCTAATACACCGTTCCCGGGGTGTTGTTTGAGATATTACG TTTGAGTGTTTCTCTTAGATATAACTAAGATAGAACTAGAAATAGAACTA CATGAAAACAAGGCCTGGCTGTATAgagggctgtagaggcctcaattGGT CCCACTGgggaactttgcctgactgcttagtttggcaaggtataaatagc cagaaaaagcactccaggcatgctccacgtccagGGTTCGGGTCAAAGTc ccaatttttgaccaggttttgaTANACAGCCAATGAGGTAGCCGATTGCT GATTATGGGTGGTTATGGGTGGTTATGGCTGTATCTGCGGATTAGAAACA CCGggctagtacccccccccccttgggtcATGGTGTGGGAACTTTGTAGT ATCGTTGTATAATAATACTTGTATATAGCATTTTATGTAATAACCATGTA ACACTAGATTATAAGATAAATGTTGTTTatcgggaaaaattttcgtcgaa gaaaattttcgtcggggaaaaatattcgtcacttggccaaaattttgtca CTCTTCCACGACGTTTCCCCCGATTGAATTTACATTTCTCTgatcaatga aaaatatttaacgaataaaaaaaattttgcttgatgaatgaaaaataatt tttgatgaataaaaatactttttgatGAATGAAANTTTTATCAGCGAACG GCCGCCAGAAGTTGACCATGTGGTATAAGGAGTTGGGTTCACGCACTAAG TATCCCCGGATCGAATCGGGTCAAGGTCACCTTTAATTTTTTatccaggt tttgatatttcatgttattttaggtgtagattccgaaaaaataggttcTA ACTCCTGAAAAGTTGATGGAAGGGCGCTACGGGACCGTAGGGGATCCGTA CGGGACAGTaaatgaccccctccccctagcgccggactgggtagGTCTCG CGACTTGNATAGCGAAAATCActtcaaaaaattgtgaaaaaacctttcga tctcgtacacgcttttttttttataagaacggtgtttttttatttcatca tggatattcttaactttttggcgaaaatcgtccaaaaatattcttacggt attcttaggttaagatcgaaattggcaatctacaggttaaaatgcatcaa aaatggcattcttaggtttagttgctaaattccatgatggtgatattctt accattttcttaatttttcggccattttcatcatggacattcttataaag tgtattcttataaaaaaaaaagcgtgtaggcttttttaacacccctgtgt gTCACAAAACCGCTTGGCCGTAGCCCAACTCTAAATTATAACTAATATAC CCTATagtttcagccccactgggaaatttactTCGATTTCATCCACATTC GAAATtcgatgtttaaaaattgcactctgaAACCATCAACACTGTATTTA tttaagcttggaacaatagaagggggaggcgtacggggtttgcgatttcc gaaataccccgaaataccgaataattttgctaaaatttctgagattccgt aaaaaaatacttgcaattccgataccgatcttttgagtatttttcttcgt tttgactaatttttcatcaaaattaatttacGCCCCCCACATAGATCCTC AccgaaaaaagttccaccagggctgtgaggcaggggtgttttTTTAAGTA ATGTCTTACCCCTCGTAAGATCCAATTTAGCAATTTTTGGACCCAGTTTA TATTTTAATGAtcttaatgtttttaatattcACCATTTAACCCTTTTCGT GCCGATctcgtatatatccgacatgcaaattttcactctacttgccaatg tcggatatatccgacatcaaatttttttacctaattGCCGAGGCCTTTAA AAAAGAGGTNNCTGtatcataaaatataaaacaaattcaaatacaaatgt caaacattggcaaataggaataaaatatccttgtcgtatatatccgacat gcggcaacacgagttaaaatttgcatgtcgtatatatacgacatcggcaa atcaggttactaaaaaaaattacccctcggcaaatggattggggtacaaa aacAAGGTAACGGCACGCAAAGGGTTAAGGCAGGTTGTTGAatgagcttt tccagaaatttttttctgaaaaagcccaatgctttttcttatatttctat TTAGCTTGCTGACTACCATAAAAGCGGACGTGGAAAGAAAACTGAATGGA ATACAGAAAAATTAAATGAACTTATTCGAACACATACTGTTGTGAAAAAG CGTGGACCTAAAGAGAAACAAGTTTTTCTTAATCAAATTATCAAATGATT ATTTGTATAAACCCTGGTAAAATGTAAGAGAGTTTGTAAACAACCTGAAA TCTTAAATTTGAGTAATCATCATTGTGCATTTGGAATATGTGGTTGTTGG CTTTCTTTGTACATGAAATTGATACCCAGTGTAAAGCTGCTTTATCACAA TAATATAATCAAAGAATAGTCGAAAGTACACACAGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011182TCONS_00011182Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011182-proteinTCONS_00011182-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122supercontigsc0000122:145073..153359 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
127.85 116.59 110.6 112.74 12.81 9.72 31.13 30.93 49.91 31.88 46.32 53.71 57.9 69.85 69.27 65.99 56.62 75.59 37.42 36.05 65.9 65.08 90.75 76.1 43.99 44.26 52.48 60.23 38.24 44.65