XLOC_006170 (gene) - C. hemisphaerica

Overview
NameXLOC_006170
Unique NameXLOC_006170
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000119:424658..431670+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006170 ID=XLOC_006170|Name=XLOC_006170|organism=Clytia hemisphaerica|type=gene|length=7013bp|location=Sequence derived from alignment at sc0000119:424658..431670+ (Clytia hemisphaerica)
GAAAAAACTCTATTTGTTTTAGGATAATAGATAGAAAAATTGTTAGCGCA TGGCTATTCGTCAGCGTAAAGGAAAGGAGAATTCCTCCCCTCCTTCAGGA ACTTCTCAAACTTCTCAAACCTCATCCAAAAAGAAATCTGGCAAGAATAA AACGCATCAATTTGCTATCATCTTTGGAAGTGTGGTATTTGCAGTTGTGG CAAGCTATGTATGGAGCTATATGAAAACCATTCGTGCTTACACACCGTTG AACGCACCCAAAGCTGTTGAATTAATCAGAGATCATAATGATGACTTACA CAGACTCTGGGGCACCTACAGGTAGGCATTTTGCCTTTTCCATTCAATCT ATACGGAAGAGATTAATATAATCAAATGATGAGATTTTTGGCCTGTCTAT CTCTACTTTGGTAGGGCCAAACTTCTATTATCCTAAGTATGACTTCCAAA ACCCTTGCCTACATATTAGTATTGTTCACTAAATCTTGATTCGTCAAACA AAAATGGGTTCTTACCACAGTaattgaatttctattgttttccttgaatt gattttgagaaatagattttgatgatttaCTCGTGATGTTTTACTGAGga taatttgaaagaatttctcAAACCAAATGTCTCAAACTATATCTGGTTAC CGTTTCAAAGCTTTTTAACGAACCAATCtttcgttgttgttatttttcat tgctattttatttcaatgttcaGTCCAATTTTGTAAATTGTAATTTTCAT AGACATTTTAAAATGAATTGACTGGAATCTAGGGATTGAAAGTGCAATAT GGTACAAAGGCTTATGCCGGCCTCTTTTTGTAAGGCCTAGAACTCTAGAT GGGGATGTGGGAAGAAAATTGCacagaaaaataatcaaataccaAGGTTC GGGAAATATATGAATACATATGTGGAAAAAACTATAATTACCTAACTGAT CACTAAATAGGGATCGTGCTAACTGTCCCTAGGTTGGGATTCGGGATATC ACTAACACATTATCCAGATGTAGATTAATGGTAAACATGATCTGGATGTT TGTTTTAACTAACtggtgaaattgaaatttcaacatCAAGAAAATGCNTG GATGTTTGTTTTAACGAAGTagtgaaattgaaatttcaccATCAAGAAAT TGCTAttcctgaattttcaaaataaagatcagtttGTGTTTCTGCTGAAA ACATCATTCACGAATTAAATCCTGATTTATAGAAAGCTGGTAAAATAGTT AAATGTATCATTCTGTGAGCATTGGTTCGATAGCTCTCATTCGTTCTGac atgtacttgcgctacttttcaaatcccggcacttttgtcacaacagtgga GCTGCACTAGAAAGCCAACTCAATGACCTCAAACCCGTGtcaccgatcca ctgagcccttgcgacgcaagtccattgcgaacgaatgaggccgccctggc gggacgcctcacctttagCGTTGTGTTGCACACTGATCGAATACATCCTT ATGATGGTTTGCTTTACATACGACTCGAAcacttttgagtgaaaaatcac ttgtggttttttcACGCGCATGCATAATAGAAGTTAGATTTCCCTaacct gaaaataattttcccgAACTTAGGCTCTAATTTGTGacagtttaaaattt ttgattgaattgtcttatttgaaggtttgaaaaataagttctgATTTAAT TAATTGTTTAAAGGATACACTCAAATTAAAGAGTTCGGGAAATCGAATTT TCCAATCTGGGAAATTTTATTTCCCTAATTCGAGAAATCACATTTCCCGA TCCGGAAAAAGAATAGAATAAAGCAAGCAAGGTCACAATTCGTGATATTT CCTATCCCtaaaggggaactcaacaaatttgacatttttatttttttact gatttttggtaatattaagtataaaaatgagaaagaaagtatATAAGTCC GATctctcaaataaaaatcatgaaaaatctctcttaacttcagttaaaaa tatgttaaaaaaatcaccccctttcttttaaaaaaagatcgACTTCTCTt ttgattatgacgtcactgcATTCAGAAAACAGAACAAATTCAGTTATGAT TACAGTATGTTTTCAGAGTtctgttttaaataagaaataaatacatAGAA AAGTATTCCTGGTAAATTGTGGGTGATTTAGCcgaataacaataaaaaat ccaacaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNGATGTAATCTATTTTTCACGAtgtgatttctaatt tttcctaGTTTCTTTATGAATTAGATTACCAAACTTGTGAATTTGTATTT TCGGATaggtttctttttttcatttagaaagaATTTTAGTGGTTGGTGTT ATATTGTTTCCCTTCCTTGGTCAcaacttttacctatttcaaaaatttta tgtttaTGATTTAGGTTTTGCCATAGAGGATTTTATTGATCCCGAATATG CCAAACAGATTTGGGAAATGATTTCCAGAATGGTAAAAACAAATACCCAA TGCTCCAAAGAATCCTAAGTTAACATTCCCTAATCCTAAAAGAAATGGGT TGAAATTCCCaatctgttttcaattttcactagtttgggatttaaagatt ttttcctgtgttggTGGTATTTAAGCTTCCTGGTTCATTCGTTTATTCCT TCATTTCTGAATCAATTCATTCTTCGCTGTTTTTGTTTAATCATGcatca attttttgttttaagacTTCACTTTTCTTATTTGAGTTTTGACTATTTGC CTAGCGGAGGGTAGAACATGGACGTGAACATATTTCATTCTAAAAGTTTC CAAATTTTATGTAGAATGGAAAAATTCGCTCGGAATGGATTTTGGACAAT TATTGACATTTAACCATATAATCTCAACATTTATTATATTgagaaatcat actaatctttCAGTGCTTACACTCTGTTACTATCTAAATCTCTCaattat ttgaaaaagtactgGCATTAGCGcaaaaatgcttaaaatgagcatttttg gtcaaaaaagggtcaaaacaaaAGTGTCCAGTGTCAAAATCTAATAATCT CAACGAACTACCTGATAGTGGAAATATCAATATCAATGTAATCATTTATA ACGTAATTTGGGCCTTTTGAGTCCAAGATTGGCCCATTCCGTGCTAACAT GGAAATTCATattttgcacgtttttttataagaatagtgtttttttgTCT GAGGGTAAGTATTATTCttattttctattgttctaaacaataggcatATT GTTCTCTTAAATGTCACCCTTATATTCTTaaagaagttattcttatataa GAAAGCGTgtatatcaaatttaaaaacaaacttttggtTTATAATATATC CACAACTTTCTAATATATTGAAACTGCAAGCACTGTTGGTTTTTTGTGGG TGAGTAGTGTTTGGGGATGAGAGGCTAAAGTTTCAAGAGTCAATTGTGAA ATCatgtgattttctctttttctcagATCGCATCTTTATTTTGGTGTACG CGCACGGGCGCCAGATTCATTGCTATTCGGCTTGCTTTGGTTCGCTCAAT ATCCTCAGGATGGACAACTAAAAGTCAGGTGAGACAACACCCTTATTATT CTACCATGAAATATTGATGCATAATAATATGATTTTACCTTACTAAAGCT AGTTTCTTAGAGTTTTCTGTCGACAGAAAAATTTTATCGTCTAAATGTCT CTAAGAATTTCGCTTatacttttcaggtattcatgCGAGCAAGGTGACAA CCTGCCGAAATACGGTTGGCTACAACACGACGGCTCAACTTACGGTGCGC AAGAGATTGTAGATGAAGACTTCATTCTAACCACTGAGTACATCAAACGT CCTAATCATGGATCGAAAGGTGGTGATTGGACGGCAAGAGTTAAAGGGAA ATCAAGAAACGGTGATGTAAGGAAATAGTGAATTCCCCTCGAAACAAAAA ACTGTTTTGAACCTGATTTTGTTTTGTAGCACAAGGCTGTACTTTTTGAT GCAACTAACCATATCAACAAGAGAAATGATCTTAGTAAAGTTAAAGATTA AAAATGTCAAAGCCTATGCTAAGTGTTAGTGTTGCTATTTTTATAGAAAA CGGAAGGGTCgcttaatttgaaattttgaaaataatgtttaaaaatctca attttaagTTATGCTGTCGATTTTCGTTAGAGCACAAAAATGACGTTGAC ACTGTCTTTCTTAGAAGAAGTCCATACAAGCAGTGTCGTTGATGTTTGCT GTGTCGAACGAAGGAGCGGGAAAGCTCACCAGGATTGTGAATGGTGAGAG AATGGCTGAGATCAGAGGTACGGCTTCAGGACATAATTTTTAGACCTTTT TATATCAAACTCCAAATGAGCTTAATCGCAATAAACAATATTTACGATGC ATGTAAAATATGTTGGTACAAAATATGATTATGTATACTTTTGGCGaact ttcgcgaacagaaactttcgcgagtctGGCCGTTTCAATTTTGCTTCAAC TCGCTCACTCCTTCTTGTGGGTGCTATTTTCTCATTAAAAACCCAAAATC TCGTCTGatacacattgtttttataatcagctcatggcgttctaaatcta cagATTTAAATCTGTAGATTTAGAACGCAATGAATcagctccaattttcg ggtcaaggcttgggttgcttagcattctagctcattttctgaaaaataag cTTCAACCAACCATGCAGAACCATGATGTTTACTTTTTACGATAGTGAAA TAAATTGGCTAATTTCAGGGCTCGAGCCTTAGCAACCTGAttacttattt aaaaaaatgtgtagacaACAACATTATTTAATGTGAAAATCCTTAACGTC AATCTTCTTGCTCTGCCAAATACACTAAATTACTTTTTTAAATGCATCTT TAAATCCTACAGGTCGATCACCACTCCTTGGTGAATTCAAGTTGAAGTTC CGCAATCCAGCTGGTTCAGTGAAACTCAACAGTTATTTGACAACACACAC TGACGATATTTACAACCCAAAAGATACAATTATGAAGAAACTCCATTata aaacaaaaccaaaaagtCGTGATCAAACACCGTTAATCGGATTACCGGGT GACGTTCCAAACCCGAACGGGAAACCGAATAATTTGTTTGTGCACCAAGT CACATTGCAATTACCGTTTCAGATCGATGCCGTGTTTGAATCAGAGGACG GCGATAATGACCGGAAAGAGTCATTAGCCGGTGACGTCTTCGCTCGTGAA GTCAAACAAAAACGGAAAGATTTTAACGAACATTTTGAAAACACTTTCCA ACTCTCTGAGAAAGGTTTTACTGACGAACAAATCAGTTTCGCGAAGGCAG CTTTCAGTAATTGCATCGGTGGAATAACATATCTTCATGGGAAATCTAAA GTCACGTCACGGCGTTTGAAGGAACCTGTTGATTACTGGGAGACTGGGCT CTACACAGGGGTGCCTTCGCGATCCTTCTTTCCGCGTGGTTTTTTATGGG ACGAAGGCTTCCATCAAATCATGATACAAAAATGGGATGCTGGTATCACA AGACAGATTCTTTCACACTGGCTTGATCTTCTCAATCAAGATGGTTGGAT CCCGCGCGAACAAATCCTTGGAATCGAAGCCCGCCGTAAAGTACCGGACG AATTTGTGGTTCAACATAATGAGAACGCCAACCCGCCCACTTTCTTTATC ACCATAGAAACACTGATTCGAACGGAGAAAGCGGAACATGGTCACGTGAC GCCAGAAACATTAAAGTTCCTTAaaagtgtattttacagactcgATCAAT GGTACCAATGGTATAATAAAACGCAGACCGGACCTTTACCCGGCGCCTAT CGATGGCACGGGCGTGACGCGACCACAGATCGTGAATACAATCCTAAAAC TTTGACATCAGGTCTTGATGATTATCCCCGCGCGTCACACCCTTCGGACG ATGAACGCCATGTTGATTTAAGATGTTGGATTGCGTTAGCTTCAGGTATT CTTGCGGATATTGCAGATATTGTTGGAATTAAAAGTACGAAATATCGAGA AACTGAAAGCTATTTGAAAGACAATCGACTTTTAGATCAGATGCATTGGT CTGATAAACTGAAGACGTACGCTGATTATGGAAACCATACCAAGCTTGTT AAGTTAGAATGGGTTCCTGTACGGTACGAACCGCACGCGCCCAAACGGTT GGCACGTGTCGTCAAATCAAAGAAAGGACCTTCCCCAAAATTCGTCGATG AATTCGGATATGTATCCATGTTTCCTTTTCTATTAAAAATCTTGAAACCA GACTCGTCCAAATTACGAATTCTACTCGATGATATCCGCAGTCCTGAGAA ACTGTGGACACAGTACGGTTTAAGATCACTATCGCGCACCGCTCCCTCGT ATAATAAACACAACACGGAACACGACAAACCATACTGGAGAGGTCCGATC TGGATCAACATCAATTTCCTTACCTGTAAAGCGCTCCATTATTACGCGCA CATTGAGGGGCCGCATCAAGGACACGCAAAGATGATCTATGAAGAATTAC GTCATAATCTTGTTAATAATGTCTATAAACAGTACCAGAAAACAGGATAC ATATGGGAACAGTATGATGATAAAACGGGGAAAGGACAAGGCTGTTATCC GTTCACTGGATGGTCAGCTCTTATTAATCTCATAATGGCTGAAAAGTATT AATGAATTCGTCCCATACTCTTGAATGAAACTttctattttagatttttt cttttaatttctagGTAATTTTTAAGTGACCAGTCTGGTtacatttttga caattttataGGTAGAATTTTTCAACTAGGTTTATAATTCAAACATACAC AAAATATTAAAGCGAATTCAAATTATGTTCGCTGTCACTTGATCGCATTT TTCTGGCATTCcc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011009TCONS_00011009Clytia hemisphaericatranscript
TCONS_00011010TCONS_00011010Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011010-proteinTCONS_00011010-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000119supercontigsc0000119:424658..431670 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MOGSmannosyl-oligosaccharide glucosidase isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.15 17.29 4.53 2.66 18.89 14.38 21.5 22 12.74 16.19 12.25 7.33 8.09 6.33 10.6 14.03 18 11.8 4.21 10.75 7.43 7.47 44.01 37.45 9.2 8.87 8.85 8.55 30.28 28.62