XLOC_005655 (gene) - C. hemisphaerica

Overview
NameXLOC_005655
Unique NameXLOC_005655
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000102:421307..425436+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005655 ID=XLOC_005655|Name=XLOC_005655|organism=Clytia hemisphaerica|type=gene|length=4130bp|location=Sequence derived from alignment at sc0000102:421307..425436+ (Clytia hemisphaerica)
CTCCGAGTCATGGAGCTGTCCAATATGTGAATCCAACAAATATATTGGAA
TGATTGAATGTGATTTATGCAACGTCTGGTATCACATGTAAGTTAAAAGC
ATTATACTGGGTACACATTTTtcttaagaaactagttttaccaagcaacC
TTAAGAAATGGGCCTTTTGAGCCATAATGTTTCTGAACTTTTTGACATAa
ccagcctcagcatgtttcttagtttttagggattctgagcctcgtgtttc
ttaaaactgaagtgtgtttcttaaaaagaaaaaaacgtgtaacccaAAAA
TATGAGGGCTTGATGGCTTGATGACTAAATTGAAACTTGGTTTATAATTT
TCAGACTTTTCGGTTCAGTTGCTCTCAAGTTAAGTTTTTGaagtcaaatt
ttgaaaaagccagaaaacaaaacaaaatcaaattaaGAATCTTTAGCAAA
TTTTGACACAAAATTCCTTTCCTCGTTAAAATCTTTAGTTTCGCTATACT
AATTTGAGGTCGTTGTACTGTTTTCCAATCTTCGTACTATGATGATAAAA
TTGATAATCGATTTATTTGCACAGGGATTGCGTCAAGCTGCAACACGAAG
AGGAATATTAGGTCTGCGAAAAATGCCCAAGTCTCAGAAAAAGACCTCGC
AAATAGACTAATGATAGTTCTTTATGATAGTTTACAAAGAAAGAATAACC
AGTTATTTACAACTTATTCGTTTTTCCGTTTTCTCTCTTGTTCAAAGAAC
TGCCTGGTTCAGATTAGTACTTTTTTATTCAGAATATTGTTCCAATCATC
TCTTGGTTTACCATTGAGCCCTTCTTTTTTTAAGTGTCCGAAAACTAGGT
TTATCACCCAAAGTTAACAATTTAGCCTCACTCTGTATAATTCAGGATTT
TCTCTGTCACACGTATACGTCGAGCCAATGTTGAAGTTAACCACGTTATA
GTTATTTTATAATAAAAAGCATGTAAATAGTAATTTGCGTCTTCTCGTGA
TTTAACTTTATACTTGATTAAAAGCTAAGATCTGAGATGACGCAAACTCT
CGCGAACaagtccgaaaacgaaagtgaatccCGAAATGATATACTACCCG
ATTTCGGATttaatcgggaaatcgggaaattcgGGGAAATGACGACTTGC
GTTTTCNGCAGATTCGtacttttttcttcagaatATTGTTCCAATCATCT
CTTGGTTTACCATCGAGCCCTTCTTTTTTTAAGTGTCCGAGAACTAGGTT
TATCACCCAAAGTTAACAATTTAGCCTCACTCTGTATAATTCAGGATTTT
CTCTGTCGCACGAATACGTCGAGCCAATGTTGAAGTTAAGCACGTTATAG
TTATTTTATAATGAAAAGCATGTAAATAGTAATTTGCGTCCTCTCGTGAT
TTAACTTTCTCTTTGATTAAAAGCTAAGATCTGAGATGACGCAAACTCTC
GCGAACAActccaaaaacgaaagtgaaacccGAAATGATATACTACCCga
tttcggattttttttttttttttttttttttttttttttaaacaaaaaca
cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNatataataaaagccgacagaaaaaaggagggttaagtggcggatgaaa
aataatgcctagggtctgaagtttgtcgaacaaagattgtcttgcatggg
aatatatagctcagtgcagaagaaagtgttgagtgttttcaacagagtta
gttcggcaaccacagaaagggtctaaagtgtcgcggaagccatgtctaaa
tttatgctcgttgagatggctgaaaccgagacgaagtcgattaagaaaga
tcactccttgaatgtcaggaacatcaaaaacattcGGATTtaattggaaa
atcgggaaattcgGGGAAAATGACGACTTGCGTTTTCTCGGCATTTAGCT
GCTTCTTTACGTATTAAGAGCAAGCCTGAAGCCCTCAATTTAGATTACCC
AGCCGGTacacaacgttttcaaaacgttttttttaggtttaaattaCGTT
GTGAAGAAACGCGTTGCCacaaaacgttttaaaaacgttttttcaacgtt
gtaGAGAAAACGCGTTATTTcataacgtttataaaacgTTGTTGAAACGT
TTTAATCCAAacgtttttcaaaggttttgctaACAACGTTTAATAAgcgt
tttttctaaacttgatttaaacgtgattttgatcaacgttttttaaacgt
ctaTAAAATNNAACCTCATCGACTCTCAGCTTTTATCCCAAGAAAATTTC
TGAGACTTTACCTACCTCTGCTCTGAGATATAGGAGAGATATTCTATATA
TCTTTTTCTATTTtactttattgacttctctctaAGTGTTAAATATATTT
CAATAAAACGCCCACTCCCTGTTTGAATACCTCGTAAGATAGCCCACCCN
ctaaatatattttaataaaacgcCCACTCCCTGTTTGAATACCTCGTAAG
ATAGCCGACCCGTAGAATAGAAACTTGTGAAATTATCTCTGTCACGCCCT
TTCCAAATTACAAACCACGCACCCGCTCCCCGGCCCACTCGCCGCCCCCA
TCGTCCGCCGAATTAACAATGGAATGGCTTCTTTTCTGGACagctttcga
acgttcgaacgttcaaAGGTTCGAATTCGAAATCACTTGtagttcaaaat
aaaaatcaaacaaagtaaAGGTTCTGTAAAAGTTGGATGTTTCATGCACG
AAGACTGGAAGAAGCTGGTTCTGTTACAAAAATCAACTAGATAATGTAAG
TAGTTTACATTAAactgaaaatgcttttgatatTTAAGTTAATTCTTAGA
GGCTTTATCGGTGTAGCTTATTTCAGGTTTCAATTTCTgatgatatttat
ttttgagagcaaaccctggaaaaattacataatcttcagtaaactttatg
ttaaaactttttattttaacttctttTCCCTCAGATTCAAACTGGAGTTT
ATTATTGGTTTCCTTATTGCGACTATCCTCAGCTGACTTTGTGTGGTCGC
CAGCAGAAAGTACCGAAAATATGCTAGTAAAGGTAGGTGAAATGTAACAA
AACTTtaataatatctttccaaaactatGCTAATTTCTTGTTAATACCCC
TGCATCACTGACTGAGCTTGGTACTTCAAACTACTGAAATTTGACTTGGA
AACACCCATGTCTCAACGACAATAATTTAGCAAAGTCCTTGGTAGAATAC
TTTTGTGAAACATGaagtttggccatgaaatttaagaagttttttcttta
tccttCTGGAGTATTCTTTTTTCCGTGGAATAAGAACGTAGTTTTCAACG
TCTCAACCGcagctaaaaaatctttaaacatcaaatttactattagtctt
ttattttttcaggatcGCAAATATGTGAAGGAGACCAAAGAAATCGCAAT
CAAGATATCGTTTTTTAACACTTCGAATAGCAATCATACTGGAAAAGTTT
GGAATCATTATCACAAAGATGCCAGAAAGGAAGGACGGAAGAGaaagaac
atcaaatttttgatttcattgcgtttaatttatactgattgtagattttc
atacccagaaaattatatagaaaagagcat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010087TCONS_00010087Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000102supercontigsc0000102:421307..425436 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.72	0	0	0	0	0.47	0.5	0	0	0	0.22	0	0.57	0	0	0	0.92	0.22	0.38	0.3	0.15	0.1	0	0.06	14.59	13.71	0	0.46	0.18	0.5