XLOC_005443 (gene) - C. hemisphaerica

Overview
NameXLOC_005443
Unique NameXLOC_005443
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000098:140098..143437-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005443 ID=XLOC_005443|Name=XLOC_005443|organism=Clytia hemisphaerica|type=gene|length=3340bp|location=Sequence derived from alignment at sc0000098:140098..143437- (Clytia hemisphaerica)
AAAGCCAGTCTCTTTGCTCGCATTTTACCTAGGAGGCGGGTTTTTTGTAC
CAATTATCATCAAATTTACTACAGTAAAAATAATATAATAAGAGTGATGA
TAACAACACCAAACAAACATGTTCCGACTTCTTCATTTTCCAATTTCTAA
CACATTATCAACACAATGGGTCCAGTTGCTCTTGGCAACGACTCTATTGT
TCCTATTGGTAGTTCAAGTGGAAGCTGACAAACCGAAATCAAAGTGGAGA
GGTAGGAGCTATTTCAGATTTGGTCTAAAAAACAGGGTAGCCAATTTGGC
TGGCCAATTAGGCTAGGTTGTTGGGTACCCGTGTAAATCACAGACCAGAA
ATAATATAGTCGATTCTTTATACGAATTCTACAGACCTTTCACTGACAAA
GGCTTGGAATACCGTTTGCTAATGGTCAATGCATTGCTGCTGGTAATAAT
TCTGGTCAATGCAATGCTGGTGCTGATGGTTCGGGACGAGATAGAGTTTT
TACAAGCTCTTATTTGATTTGGTTGGTCGTTAACTAGTAATAAAACAATT
TTGTTACTTTTTCTAAAGAATGCGTCATTTTTATTACTTCAAATGATCAA
TTATCAAAGTATCTTATAAAAACTCCATCTCATCTGTATGGTTCTGGTCA
ATACATTGCACGCTTCAAAAGAATTTCACAACTGGCGAAAGTGAATGCGC
CATATTAATATCAAATCCTTTGATGAATTCTTTTATAAGAACATCCCAAA
TTTTTTGAAGCCTTTGGATGTTCTTTTAACTTTTCGAGTTTTAGGTTAAA
GAAATTTTTTGTAACATTGTTTTTCAGTATGTTTGTGCAATTTCCTAATA
CATTGGGTGTTTTAGAGTTTATATCAAGCCTTAAAATGTTTTTAGTTTGT
TCTTATGACATTTTCAATTTAAAAGAAATTATATAATCATCACAAGAGAA
AATTTCCTCACAAATTCCATTTTGTTTAGATTTCATCCAAATCTCGAAAG
CGACAGAACAACGAGAAGGTACGGTTATAACTACACCCCTATCTCACAAA
AATTGTCTCAGCCGTCCTCAGTCATCACTCCTGTCTCGTTATATTTAAGT
CATCACCCCTGTTTCATAACACATGCTTCAACACCTCCGTGTCACCCAAC
CGCTGCCACACAACCACTGTTTTTCAAATCCTGTTGAATAAACCATATCT
CAACATCCCTGTCTCGTCTTCCATCAAGGGTTTTTCGGTTCATATCCAAA
CTCCTTCCTATGTTCTGTTCAGTTCTCAAATAACCGTGGACCCTGTGAAG
CAATCGAAAGACTGCCTAAAAGTCCTAGATCACTGGGCCATCCATCTAAT
GGTAGCACTTTTCCATGTCGGCGAACAAAATTTTAAACGGAAAACCCCAT
TCCATTGAGTTTAAAGCCCGAAGGGGTTAAAGTAGATCTCTATTCTTTCC
CAGGCAAGAAAAAGTGAAGCCCCTTATTTCCCATCTGGAACGCGCCATAA
TCATGGCGACAGATTGTATCTAGCGGTTCCTTTTTCAAGACTGCTTTTTT
TGAAATCTAGCAATAGATTTTAGTTTTAAGTCGGCGTTTGTGTAAAAACC
AACACACGGGCGTTCTGGATGGGAAATAAGTGGTTCCATTTCCTTGTCGA
GTAGTGCTACCGTTAGGTACTACTTTTCTGTAAAACTCCGATCAAAGATA
GCCGATATAGCTTGGTCCAGGGAATACGAAGGTCAGAGGTTACATATGCT
TCTTATCTTTTTCCAGGAAAGTCAAGTTACAGCGAGGGATCAGCTCGTTT
GCTTGAAAGATTTGGAAAGTTACATCAAAATTTTAAAGATTTGAAAGGTT
AGACTAATTAATATTGATTTTTATATATAACCAAATAATTTTAATGAATA
TTAAAAACCTAAAATCGTTGCATCTTGTTTGGTCACTTTAATGGGATTAA
TTTTCGTGGGAATTAAATTTCGCGTTTGAGTTCATCCGCGAAATTAAAAG
ATTTCACGGGGACTTAATATCGTCACGATTTTGTGCGATTTTGACTCTTT
TGTATTTTACTGCCAAATATGCATGTTGGTTGTGAAATACGCATTATAAG
CGTTTCTTTGATTAAAAAAATGGTCTTTTGACATTTTTTGGAATACAATT
CAAAAGAATTTCGCACGGATAAGACCTTTTCAAATTTCCATCGGGACTTA
TATTTTCGCAGATAACAACGAAATCTGTGAAATCCACGAAATTGGATCTC
CGCGAAAATTTATTCCATGAAAGTATTCAGAAGTTGTTTTTGTCTTAATT
TAGAATATAATCAGTAAAATCAGCAAAAAACCTTTTCATTTTTCTTTAGA
TGAACTTGGGTACAAAGAAGGCAAAAAGATAAATTACACGCCGCCTGGTA
TGCTGCGTTTTTTTCTTTGAATTAAAGGTTTTGTTTCTCGAGTTTATCAC
AACGTCATAACAGACCATCCATTTCTACGAATAGCTAACTCTGCTCTAAA
TGGATGTGGCGAATCTGCTGAAAAAAATGTGGAAAAAAGTGATCTGATCT
GCAATCAGTGTCATAATATATTGGCACTTTTGGCTAATTTACAATTTTTC
GAAAATTGAAGTTCGAGCGAGAATGTCAATTCTTAGGCCTTCAACTTGAT
TTCATCGAGTATTTCGATCTGGGAGGGATTTATTGGTTTCTAGGCTATAT
TTCAAGCCCTACTGAACCATTTTTGAACTTTTGGTTCCTCAGATCCTAAG
GTCCTTTACAAATCGATTGTGGTTTCCAAACACCCCGGTGAATTTCCCTT
TTGTGCCAATTATTTTGTCCCTGATTGTGGTTGTTCAGCCAAAACATTCA
AAACCGCGTTGCTTTTTTGCTTGGAAATGACAGCGAAGGGACTGGGTTCT
AATGTATATGTTTTTGACTATCGCTTGTTTTGGTGTTTGCTTTAGCCCAT
TACCGCGCTCAAAAACTTTAATATTCATCCCCAGTCTGGATGAAAAAGGT
CAAAGCGGCCTGGGTAGATGCTCTTACGGAACCATGGGCTTTAGAGCGCA
TACTTGCCAGAGCAGGTTTATCATGCTCTAAGATTCGCTATCGCATTGTT
TAAGGATCAATTCATTTTTGGAAAGTTTCTGAAGCGTTTAAAGTTCAATT
ATATCAATAAAACCAAGCTATGTGGCAACGTGGTATTGGAAGTCTCGATT
ATCCAAAGCATCGAGGATTGGTGTTAAGGATGATCAGAAATCTAACATAA
AAACTTTATTTAATTATTTTCAGACCCAGCAGCACATTTAAAAGAGTCAA
GTAAGTTTTCTTACGAAAATCTTATTTAACCAAGATTTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009731TCONS_00009731Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009731-proteinTCONS_00009731-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098supercontigsc0000098:140098..143437 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
28.05	29.85	14.21	11.49	41.28	28.12	33.26	30.21	9.39	12.83	12.98	13.48	13.63	12.12	8.87	11.79	12.11	17.94	29.95	33.34	19.44	16.31	18.5	18.16	21.59	18.29	46.36	48.17	6.68	6.95