XLOC_005307 (gene) - C. hemisphaerica

Overview
NameXLOC_005307
Unique NameXLOC_005307
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000095:651020..656784+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005307 ID=XLOC_005307|Name=XLOC_005307|organism=Clytia hemisphaerica|type=gene|length=5765bp|location=Sequence derived from alignment at sc0000095:651020..656784+ (Clytia hemisphaerica)
TAAATAGCTATAGAGAAGCACTCATCTCTAGACCAATACTTCTGTGGAAG
TGATGACTACCTTCTTTTGTATCCTGACAAAAAATTGTTGACAAAATACC
ATCATCTGAAGaaacttttactgtcaaaaagTATAAAGAATTTCTCAAGG
AACCGTCGTATGAAAGGGTAAAACTATACTTATGCCTTGAGGTAGACTTC
ATGAGTGATAATGTTCCTAAAACGTATCTTGAAAAACAAGAAGACAAGAA
AATAGATGATTATTTTAATTCCAACGCTGCAGACAAGGCTTCAGATTCAG
ATGATGAGAATATTGAGAATATCACGATTGTTCCCAAAAGAATTGAAGTT
AAAGATGATGTGGTTGTCATAAATGCTGATGCAGAGGCGAAAACAAAcct
cactgaaaaaaattatccatGTCCTACTTGTAGAACACTCTTTTCATTAA
TGGATATAGAAACACATGCTGATGAGTGTGCCAATAATGCCCCAAACATG
CCCATAATAATTGATGATGAAGAAACATTTACATCTTATAACGAGGAAGC
AATGATGGAACAAATGCAAACAGAACCCAGAGAAGAGACTCAAGGAACAG
GAAGAGTATTACAGTCAGAAGAGGTACGTGAAATAGTACAAACCACCATC
AATAGCATTGAAGTTAAGGATAATGAAAGTATAAACTTAATTGTATTCAG
AGGAAGCTGTTTCAAAGACTTTCATAATCATTTCAAAAAACCTTGGAGGG
ACAGAATAGCTGCAAAATTATGTATCAAATTTGCTGGAGAAGTTGGTAGG
GATGAAGGTGGCGGTGTCAGCAGAGAGTTTTACACAGGTACATATGAGAA
TTTTAGTAGTAGTATTCTGGGTGGGTAGGTACTTATAGACCTTTCCAATA
ATGCTGCAGCCCTATTAAAAAGTTGACAAATATTGCTAAGGATCGCAGCC
AATGAGACATAGGCAAGTCGTTTCAGATTGGGATGGCTACCGTCAATCAG
GTTCAATTAGTTTCATAAAATGAGCTAGGTAACTTTCATCGATCACCAAT
TAGCAGTCTGGTCTGTGATTTGTACATTTTACAAGCTAGAATAACAACAA
GTTATGATATAACTTCTGGCCTTAATAAATTGGGGACCAGAAAATATTGT
GGTCTGGAGGTGATGAAAGTTACCCTGGCTTATTATAGTAATGCCGATTA
ATGGTACTCTCCTAGCAAAAGTTGGGGGGTtaacatccagataccagacc
catagccgggtggtggtgtccttttttcctttaaaagtttgaaaagttca
GTTGGTATTGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttcccccccc
ccgtttattaatttttaagaatattttcagctgtcaaagagaaggttcct
tattttgctcaaaaaagcctgGTTTAAGCCTAAATTAACCTCATTTTTGG
GTTTTTATTTGGGTTTATTTGGAAACTAAGAGTAATAATTCAACAGGGTG
TCTTCTCTAAACAATGATCATTTTTGTTCTTAGCTATTCtgttttatttc
attatttagaGGCCCTAAAAGAGGTGAAACAAGACTATTTTTGTGGTGTG
GATAATGCTATGGAACCACTGCTGACCAGTAGTCACTCTATTGTGGACGG
AAAAGTTAAATCCATTGGTCACTTGTTCGCTTCTTCAATTTGTAACCATG
GCCCAGCACCAAACTTTTTAGCACCATGGTTGTTTGACTACATTGTTGGT
GGAGTTGAGAAAATGTTCAAAGTTCTACCTGTTGAATTGGATCGTGAATC
CCAGTTAGGAGTTATGTATAGCAAGGTATTTATTTGATGCAGCTAATTAT
TAAAATTTCTGAAACTGTTTGACATCGATCCGTCTTCAGCAAAATCAACA
CGTAAGCATTCAATGAACATTTCATACGACCAAAGCTGTATATCTAAATG
GCAAAATATAATTCTGANATTCGATCCGTCTTCAGCAAAATCAACACGTA
AGCATTCAATGAACATTTCATACGACCAAAGCTGTATATCTAAATGGCAA
AATATAATTCTGAAAACATCCGGATTTGAACGTATTGGTTCAAGGAGGGG
GGTGAATGTTTTAACCTTGATGGGGGCTTTCAGGAAATTTTATAAGAAGT
TGGGGGGAGAAAGAGCAAAAACTAGGTATAATATTTCAATAGATGATTAA
AAATGTGTCTATATTTCATCCATTTGTGTGTTCACTGCaggaaattgtta
tttttgtttaagtTATTATTCAAAATATAGTGAATCGGTTGGACGCAAAT
ATTTTCTTCTAATGGGTGGGATCCCGGAAAAAGGGCAGGTGGGGGAGGAG
ACCAAATGGGGGTTTTGGGCCCCAGATGAGGGGACCTGAAAACCTGGAGG
ACACCATGACAATCtacttcaaacaatttttttgaaggGAATTCTGAGAA
TAGACTCAAATGCAAGTGAATATGCTATAATTTGAATTACTAATGGGTGG
TGGTTGGTGAATATTACATTGAAAGTTGGAGGGGGGGGttgcatcaaatt
ttgaaaggcaGTACCAGTAGGGGGGGGTTGCTCTAGACTAAGAGGGGTTA
GTGGCCCTTTCCAAACTATACCATAATAGGTTGACTGAGGTAATAGGTTG
ATTCGAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTT
CGAACCGGTGTGAAACGGTGCAAAGATCGGTTTTTCGATAACCGGTTCAA
ATCGGGTGttatggaaatcgcttggcaggacacaAATTTCATTACTTGTG
TGTGTCATGAGATcttaattttctcaaaactagCCTTTGTGTCAGTTTGT
GTGCCTTTGTCAATATTTTAAACCCCTTTGGAATTTCACCCCGAttggtg
aaaattaaaaaagaaaaattcatctCAGATTGATTGGTTGGCTcagaaaa
agcaacaaaatggtagatatttaaatcatttgatttaaattgattatatt
gagacaaacTTGTTGGAAACTACTTTTAATTTGATTTATGTCTTCTCTTT
TAGAACCATTTTGCTAAAGAAGATGGAACCATACATACCATTCATTGAAA
GCTTAATGCAAGGATTGCAAGTTTTTCAGTTGCTCGAACCAATTCGTTCA
AATCCGGATGTTTTCGGAATTATATTTTGCCATTCAGATATACTGCCTTG
GTCGTATGAAATGTTCATTGAACGCTTACGTGTTGATTTTGCTGAAGACA
GATCGAATGTCAAACAGTTTCAGCTTTCGTGCTATCGTATCTTTCTCGAG
ATGTGCGACTTGAGCTTCCATTCTGGtaaggttttgaattttttaaagat
tctttttttAGCTTTAATTGAGCTACATTCTTTTACATTCTAAGAATATA
CATACATCGATCTGACGAACGGCTTATTACAAaagaatcaatttttttaa
actaacGATTTCGAAAACACTGGGTGTGTTAAAATCATATTGGGCACGCA
CCCCCTTAAAAAGGGGTTgaaaccacagatatctaagcccgaagggctag
ataggcaactttaagctttctccagcaaaaaaaagtgaagcaaaaatttg
actttttaaatttcgtgccgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgagatcaaaaaac
gtaggcggcaaacgctatttcacatctctcaaaccggtgaaattgcatat
tttagtcacgtgactttggtaggaaattcTTCCAAACCTacgcttcactt
ttcgataaaagccgcaaatctagcccttcgggctttacagatatctgtgg
ttgaaacttttaaaaagaggaggcttttaaaaatttcaattaaaaaggGT
GACCTGGAAAATCTTCTTAAAGGTATCTGACAACTCGCATTTTCATTTGT
ATTGTATTATATTGCCCAGTAATGTACATTAAAAATAGTAAATAgtttaa
atttcttttgttttttagatAATCCACCTTTAAAGCTAGGATTTCTTCTC
CAGTTTGTTACTGGTGCTGAATCAATCctcccctctggaattccgcaatt
gattttgaaattcaaacccCTGTGCGAAAAGGAATAATGCTTACCAGAAG
CCTCAACTTGTGCTTCGATTTTAACCATCCCGCTTCACTTTCAAACAGTC
GAAGATATGTTTCAAAGCTTTTGTGAAGCTTTCAGCCACGTGAAAATGCA
TGGTTTTGGCAGTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009498TCONS_00009498Clytia hemisphaericatranscript
TCONS_00009499TCONS_00009499Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009498-proteinTCONS_00009498-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000095supercontigsc0000095:651020..656784 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	39.95	32.39	21.73	29.55	17.48	16.51	12.95	14.06	9.6	9.78	0	0	0	0.02	0.38	0.21	0	0	0	0.03	17.07	33.06	0.09	0.05	0	0