XLOC_005259 (gene) - C. hemisphaerica

Overview
NameXLOC_005259
Unique NameXLOC_005259
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000093:124998..128256-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005259 ID=XLOC_005259|Name=XLOC_005259|organism=Clytia hemisphaerica|type=gene|length=3259bp|location=Sequence derived from alignment at sc0000093:124998..128256- (Clytia hemisphaerica)
AAAAAATGAATAGAATTTCATTTTGGTAGACACTCCTCTATCATAAAAGC
ATACTGTTGCATAATAATTTGTTCATTTTTTATTTCTTTCCAGTGGTTGA
AAAAAGACAATAAAATATAATCACAGAGAGATAGAGACAGAAGTTTCTGC
AGAGGAATAAAAATATTTTCAGTTTGAAAGAAGCATATTGCTGACTGGTT
GTTAAGGATATCAATAATTTTTATTTTTTGGAAAAAATGGGAAATTCAAC
AAGCAAAAACAAGACTAAGGAGAGTGCAGGTGAGATTTCGTTTTTGTTTT
GATTTTACATTCCCATAAAGATTCTGCAACGGTTTTGTTTATTCTTGCTA
AAAACTAAATTAATATTTAGGCACACTTTCTCTCTTTAATTAAGGATCGT
TAGTATTTCTGCTGAAGTTGTCAATTACAGCGAGAAAGTCTTTCTTCCTA
ATAATGAAAGTTTTTTCCTTTTTCTATTTTTTGTTTATCATTGTTTTTGC
TTCACTAAAATAATTTTAAATTGGATCAGGACCTGCGTCTTAATGCTAAC
ACAACATCTTAGCTGGCACTGGGCGAAATAAGAGATTTCCATGTTGAAAA
TATGATATTTCCATATACTTTTGTAAATATCATATTTTCAAAATATTTCC
AACTTTTGGAAATATGATATTTCCAAAAATTGGAAATATCATGAAATATG
ATATTTCCACAACTTTGGAAATATGGAAAAGTCATATTTTTATATTTTCA
AGATATTTCCAGGATTGGAAATCTCTTATTTCGCCCAGTGTGTATTTTCG
ACAAAGATTCACTCAAATCGATAAAAGGAGTGACTAATACTTTCAGGAAC
TGAAGGAATTTAACTTTGCACGCAGACTCCTTCTGCTATATATATTGAAC
GAAAATGACGAGATTTCTCCACTTTTTTATAACAATTTTAGCTGTAAAGG
AAACTGTTTCATAAAATAACTCACTGTAATGACAGTTTACAATCAGAAAT
ATGTTCGTTATGTGGTTTTAATAAATTTTACCCAGCTATAAGCAGTGCAA
TGATAGATTTTCATGACTTGATAGTTTGATTGTACACAGTAGTGATTATT
TTGTATCCCCCGTCTGATTAGCACTTGTGAAAAAATGCCCGAGGGGAGCA
GCCCAGTTACATTGAAAAACAATGAATGATGACTCCAACAATCCCTGAGA
AACTTCTGAAAAACTAGAAAACTATTTTAAAAAACTATATTAGCAGTAGT
ATTTCAAGACCTGTGTCTCGGTGGCTCGGAAACTTGAAATCAATGGGGAT
TGAGAACTCCGCCCATCCCACCAAAATCTTCCAAAATCTCCTGTTTGAGC
GAGAAGGTATTTACGATGATAATTAGTCATTGAATGAAAGATTCAAATTT
ATACAGGAAAGAGTAAAAAATTGAAAGATAAACTCACTTTTCAAAGAGAA
AGAGACGAAGGAATAATCATAATTCATCCTTTCCACATGTTATATAATCC
TGTAATATTCCTTATCTTTCATTGAACTCATTCAATCAATTTGTTATCAT
AACGTAAAGCATGAATGGCGCACCCTGTGGACCCTGTTTTGATAGTGAAA
TCCTCCTTAAGCTCTTATTAAGCCCTTCTAATCACGCATTATGAGTTTTT
GAAAATGATCCGTGTGTCTGGATTTCTCATTCCCCCTTTTTTCAATTGAT
TATATATTACATTGTGTAAGCCTGCGACACGTAAACCCCTTCTTGATTTG
CTGGGGCCTCAAAAGCCCTACACAAAGTCCTGTACATTTCTTCTCCAATC
TGAAGAACTATTGCAGTGATAATCATTTTCTAAGCTTTTGAAAGAATATG
CCTTGAAGCAGAGAGAAGCATCAAAGGATTTGATATTTGTAAAATATATA
AGCTTTTTTATAAAGGCTGTTTTAATTTTTTCGTGATTTTAAGGTTTAAA
TATTTGAAAAAATGTGACAAGCTCGAAATATGAAATCAATCTGCTTTACA
CAAATCTCCATCAGCTTCAAGTTGGGGTGAATACGTTAGATCTTCCAAAT
AAGAGGGAGGGAATATATTATCGCTATGGAATTTTTCTTCTATTCTTTCT
CTTAAATGGACTTTGAACTTTCGAAAAGATAAAACCTCAGTATTAAACAA
CTTTTTTTGTCATATCTTTCTTTCTTTTAATATCATATCTTTTTTTCACT
GATACTTATCTCTTGGAATGTCAAGAGCAAGAGATGATGTAACTTCTGTA
AATATCCAATTCAAAACGTGACTTGATCCATGCCAACTGTATTCCGTATC
ATTTATATGCTCGAATAAAATTATAAAGTGCCCCTAAGTATAACCTTAAA
TTCAAGCTAACATATTTAATCTTCAGCATAAATATCATTTTCTTAACACT
CTTTCAGCTCAAAACGGCAAAGCTCCTGCTCCAGCAACTGAAGAGGAAGT
GATCAAAACTCCCACCGCCGAGCCAGAGGCCCCTGCTGCCGAAGCTCCTG
CCGCCGAACCTGAAGCACCAGCAGCCGAACCAGAGGCACCTGCCGCCGAA
CCAGAGGCTCCTGCCGCCGAACCAGAAGCACCAGCAGCCGAACCAGAAGC
ACCAGCAGCCGAACCTGAAGCACCAGCAGCCGAACCAGAAGCACCAACAG
CCGAACCAGAGGCTCCTGCCGCCGAGCCTGAAGCTCCTGCTGCTGAACCA
AAAGCACCTGCTGCCGAGCCAGAGGCCCCAGCAGCCGAACCAGAAGCCCC
GAAAGTAGAGCCAGAAGCCCCAAAAGTAGAACAGACTGAATCTAATCCAA
CAGAGGAAGCAAAATCGAGTTAAAACAAGGGGTGTTGTTAGTCTTCAGTT
ATCTTTTTTACAAAATGAAAATGTAGCTCAAAGGTTAGAATAACCAAATA
TAGCGGAAGAGAATGTTTATCGTTGCTCGTGGATGACTATCAAAGATGAA
TTCCATCAATAAAACTGTTGAAAATGCTACATCAGTGGAAAAAACATTGT
GAATAAATGAATTTCTAATTAAACAGAGAGAACGCTTGGTGATAGACTCA
CATAATGCATGCATAAACACGAACGTCGAAAATATTTGTGAGAATGGTCA
GAGATCTCATAATTATGAAGTTCCTTCTTTCTCAATGAAAATAACCTTAT
TTTTGTAAATAATAAACTTGAGTTTTAAAATCAAAACACAGTCTAGTCTA
GTCACGCAAAATCTTGGCTACAATCAATTCATCTGATTAGTCATTTTATT
TTACCATTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009391TCONS_00009391Clytia hemisphaericatranscript
TCONS_00009390TCONS_00009390Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009390-proteinTCONS_00009390-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000093supercontigsc0000093:124998..128256 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.45	2.17	4.95	5.01	0.72	0.37	2.89	3.04	1.97	13.36	3.71	1.13	3.06	2.18	6.16	3.21	44.13	37.71	3.01	3.98	153.25	159.66	121.1	157.51	115.89	82.46	95.71	111.23	51.35	32.37