XLOC_005128 (gene) - C. hemisphaerica

Overview
NameXLOC_005128
Unique NameXLOC_005128
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000090:653758..657620-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005128 ID=XLOC_005128|Name=XLOC_005128|organism=Clytia hemisphaerica|type=gene|length=3863bp|location=Sequence derived from alignment at sc0000090:653758..657620- (Clytia hemisphaerica)
AAAGTAAATCACATTTTATTTATTTTTGTTACAGCGTATCATAGTGTGAA
GTTGTTTTATGTCTTATCTTCTAATTCTACATATTATATTTTGATTATTA
ATGATTTTGGATTTTTTGGTTTTAATTTTTTTTCAGAATTTATAGGTCGG
ACGAGAATGCGGTGATTTTAGCATTTTCGTTTCATTTATTTGGGAGTTTC
TTACACAGGGAGTATATCTATAGATGTCTGTAAAATGAAGAGTAAAACGG
CTTGAGAAAAGAAGACACATTATTGTGTCATATTTAACTATAAACTAGCT
GTACCGAATCTTTTTTTCTTTGAAAAACGCGTACTAAACAGTAATATTTT
TCCAAAAATAAAAACACATTCGTTATTTCAGGATAAAGTATTTAAAAAGA
AACAAAATGTGGAAGATCGTAGCTGTGTTTTGCTTGTACGTCCAAATGAC
GTACGGCGCCGTCAATGAACTGACGGATAATGATTTCTACAGTTACGCAG
CAAAGAAGCAAGTTTTATTGGTCAACTTTTATGCACCATGGTAAGTTACA
GTTTAAATGGCAATACATATATTTTGAAAAGGGACTGGGTTCGAGTTTGA
TTGGTTCATTCCCAGCTGGCACACAGCGTTGTTTCAACGTTCATCTAATG
TTATATGGACGTTGTGAACGTTAAATAAACATTGAAACAACGTTGTGTGC
CAGCTGGGATTACCTCGTCATCGACTTTTTACTATCTAACCTCAATTACA
ATAGGTGCAGTGACTGTGCAAATTTGAATCCACATTTTGAAGGCGCAGCG
ACCACCCTTGGACCACGCGGTGCTGACTTGGCTAAAGTAAGGGCTTGGTT
TTTAGGCTAAATTCTACCCCTCCTTCTCACAGACCTGTTGGTACCCCCTC
CTACTCACAGACATGTTGGGACCCCCTCCTACTGGAAAAATTGGTCAAAA
TATCGTCCCCAGTGGAATATTACACGATTTTTGTCCCCGCTGAAGAAAAT
CAATTAAACAAATCTTAACTGCAAAATATTGTCCTGTTTTTCCGATCCCC
ACTGAATTTTCTGACTTGAAAACAAAGGGAAATCGAATTCTCAGCCATAA
AAACTTGGGAATATTGATCAATCCCCATCGAGTTTCAGTTCGTGATTTTT
ACCCCCACTGGTAGTTATCTGTGAGAAGGGGGTGTAATGCTCGACATCTA
AATTTTCTTATAATCGTACAAAACTATATTACTGTGAAACATATTTTATA
GAATACCCCCTTCTCACAAACCCGGTAGGATTTTTTCAGTCAGTGGGGGT
AAAAATAACGGACTGAAAATGGCTGGGGATGTCAATTATTTTGTTTTTAA
GTCAGATAATTCAGTGGGAATGGCAAAAATAACATAATATTTGAAGTGAG
GATTGGTTTATTTGATTATTTTCATTGGGGACAAAAGATGGAAATTAATT
TTCCACCGGAGACGATATTTTGGCTAATTTTTCCAGTGGGAAGGAGTCCC
ACCAGGTCTGCGAGAAGAGGGTGTTTATAATAACCGAGTTCAATTTTATG
CTTCTTTCTTATCAGTTTGTCTATTCTTAGCTTGTTATTTTTTTGCGACG
ATATTGAACAAGGTTCTAGTCTTTTCCGTTTTTAACGGTCATTTGGAAAA
ACTGATTCTACTCTTGAATCTCTTTCCAACGACAGCTAAATATAACAGCC
TTGATTCTACGTAGCTCAATAAATGAATTTGAGCTTTTTATCAAATAGTG
AAAAATCATTCGAAATCGTTAGGAAAGATTCATTTAGGCGAAAATAAAAA
AATGGTCGGCCGGCCGCAGACTATGGGCTCCTATATATGGTTCAGTTCAG
CATAAAGAAAATCAAGTTAACCGTTCAAGCTATCAAACGTCGTTTGGTTA
GATATTCCCGCTTGTAAATGAAGTTTTATTCGTTAGTAGTTGATACATTA
GTATTTTTTCCGACCGGCCGAATGAGAGCTTCGTTCCTTCACCTGCATTC
TGGAAACACTATATTTTTTTTTATTTTCGCTATGCCAAATCTTCAACAGA
ATTAAGTTTGTTGATAGATCTACTCTTGACTCTCTTTCCAACAACAGCTA
TACATATTATTTTTTTGTAGGTAGATTGCTTCGGAGCTGGTAAAGGGATG
TGTGAAATGTATTCCGTTAAAAGTTGGCCACAACTGAAATCTTTTCACTT
TGGAACATACAATGGTGACTATACCGGGNTAAAGGGATGTGTGAAATGTA
TTCCGTTAAAAGTTGGCCACAACTGAAATCTTTTCACTTTGGAACGTACA
ATGGTGACTATACCGGGCCACAAACCACAGGTGAGTAATCAGTAATACTA
ATAGATACGTGTGTAGAATGTTATTTCTTCTCCACTTCAACACTGGTGCT
ATTTAACAACAAAGAGTAATTAGAACTCAAAGCTCTTTTTCAAGAAAATC
TTCCCTTTGAAATGAAAACAAACCTCAGTCCGTAGAAAACTCAATTAAAA
AATAGAGGTTTGATTGAAAGAAATAGTCTGATTGCCATAATAGTACCAAC
GAGATCGTGTATATTTCCATGTAATCATTCTCATTTTGAATTAAACATAT
TTGACTTCTAGATGGGATTGCAAACTATATTAACACTGTTGAAAACAGCG
CTGCACCGCAAGTAGCACCAGAGCAGCCTGCGGGTAACCCATACGCCGGA
CACTTACCAGGTGCCGCACAACCGGCAGCCGGATTCAACAAACAACCTGT
TGCAACATCCCTCTCATGTGCGAAATGCAAAATCGAAAAACCAAAAGGAA
AAATTAGTAAGTTGAGTTTTACGCCTGTCTTATGGTAAAACGTTTAAGTA
AGTTACGCATCGGTTTGGTATAGATTTAGACTGGCACGCCAATCGGGCTG
GAACAGTGAACGCAGGATTTTAGGATTTAGGTTAGCCTATCTCTATCCCA
ACATGCGGTTTTTTATCACTCTCGTTTTGAGCTTTATTTACAAAAACGCG
CCTTCGCGGTGACAAATTTTATTGATAGAGTTTTTGCTGCAGTCAAAAGC
TACGGTCCTTTGGTTTAAGCAGAGAATTTCTATTCCCCCAAGAATCTCTT
GGGAATAAATGTAAAAGGTTACAGACGGAACGGCGTCGAGGAAAAAGCCG
TGGTCGTTTGGTACAGGCAAGATTTAGGTAAGCTTAGGAAAAAAATTTGT
CAGATCATCAACTTCTGCTTGTTGTCCTACGTAACTCCTATTTTAGCAAA
CATCCACCGCCCTTCTGCTCCCGCCCTTATTAATTACCAAACTAGTTTGC
TAGTCTAGTATGAGGGGATTTATCTAAAGGATCCTGCATTTGCTAAAAAT
AGACTAAAAGAACGACAAATTTCATAAAAAACGACAAATGTCGCAATCCA
CAGCCCCGACCGATTGTGACTGTAGCACCCCTACGTATTCATTCCTCTTT
ACTTATCACGGGAATTAACTACATGTGGTTTGAAGAACGACAAATTACGC
ATGCATGTTACAATGTAGGATTCTTTAGAGGAACAGACTGTATAGATTTT
GCTACAGAAATAATTTTATGAATCCTTCTTTTTTTATATAGATAAAGGAT
GTACGTCAGCTTTGAAGAAACAGTGTATCACAAGCAGTAAGGATAAAAAA
TCTTTATCCAAAGCACAAATGCAATATGGTGAAGATGACAAATAAACATG
CATGCATGCGCATGGCTTTTTCTTATCACGTGATCAACAGTTAACCAATT
TGACCAATTATCTTTGTATTATTTTTTGATCTTATCAAAATCTTGTATAT
TTTCCTATCATTACATGATAAATATATTTTTTCATACCAGAAATTGTCTT
GATTATTACTACA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009154TCONS_00009154Clytia hemisphaericatranscript
TCONS_00009153TCONS_00009153Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009153-proteinTCONS_00009153-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000090supercontigsc0000090:653758..657620 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04	0.07	0	0	0.81	0.68	36.82	42.45	31.12	15.32	44.6	59.18	107.11	87.32	72.97	143.54	65.82	71.89	0.23	0.16	29.64	29.03	23.04	24.31	47.07	61.67	3.74	0.99	0.08	0.2