XLOC_004975 (gene) - C. hemisphaerica

Overview
NameXLOC_004975
Unique NameXLOC_004975
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000088:129299..137557-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004975 ID=XLOC_004975|Name=XLOC_004975|organism=Clytia hemisphaerica|type=gene|length=8259bp|location=Sequence derived from alignment at sc0000088:129299..137557- (Clytia hemisphaerica)
GNTACGTTCGTGACATGCTTCCTAGTAACTGTTTCCAAGCAGTGACAAGA CTACACCAGGTAAATACGGTGGTGTCTCCATATCTCGAAAGCTCGAAAGG TTTATAAGGTATTTTTAACAGAAGCGACCATAAAACTTGTATGAGGGAAT ACGTTCGAGAGGTTCGATTAAAACAAAAATTTAGAAATTCATGTAACTCG AAAGCCCACCGGGAACACTTTTTTGAGTTAAGGAGTGAGTAAGGCTTATA AGGTTTTGTTAACAGAAGTGACCATGAAATATGTTGTAAAAGGGAATACA TTCGAGTTAGAAAAGTTCGACTTATAGAGGTTTTGCATTAGAGCTACTGA ATTTTTTTACACAGTTTTGTTAGTTCGGGCTCAGGTGTTCGGTAGTTTTG ACTGGTTTCGGAACACATTCCCTGCATTTTTGTATCATACATCATACATA TTAGATCGTCAATTTTCCGTTTTCAAACCTCGATTAATCGAATCTTCTTC TACCCCCCCCCCCCTCCAGCTTATAAAAACTCGCCAAAGATCCAATGCTT TCGAATCCTAGTTTTCTGATCATCCTCTAGTGAAAACATTTTCTTATATG AATGAAGTGTAACTATAGAGGTCTACGAATCAGACTATTCGAATCCCTCT CTGATATGAAATGGGTTCTTGGCTCGAATAAGAGATAAAATCAACTTAGT CTGAATCGCAGACCTCTACAAAACCGCAGGTAGTATATAAGCACGAATTC GGTAAAGGATGCAAGCAGCCTTAAGTCAACATGAATTGCCCAGTGTTTGT AAAGTCTTGAGTTTATTTGTCCTCCTCTTTAGCTGTCACAATCCGTCAGC TTGCAATCCGTCATACGTAACGACGTCTTGCCGACTGTACCGATGATCGT ATCACTTGGTCGTGAATTTGGTGTGCCTTTAACACGAAATGATCTCCACG AAACAACCTCCTTGTTGGCTCCCACTGAAGCTGGAACGAAGAATGTAGAT AACATGCATCAGACACAGGTAACTAAGGTACTTTAATGGGATATACTTTC ACGGGGATTAAATTTCGCGGTTGGGCCTATCCGCGAAATTCAAAAATTTG CAATATTTTCATGATTTTGTGACTTTTACTGTCAAATAATGCATGTTGGT TGTTCAAATACGCATTATTCGCGTTTCTTTGATGCAAGTGGCCATTGAAA TTGTATTTATTTGATACATTTTGAGTTTTGTTTAGAAATATTTTGCGGAT GAGGTCCTTCCAAATTTCCATTTGGATAAAATTTCGCGGATTTTCGCGGA TTACACCCAAATCCGCGAAATCCGCGAAATTTAATCCCCGCGAAAGTTTA TCCCATTAAAGTAGCTTTGAATTTTCGGACCTATTTGCACTCTGGAGGTC CTATAAATCAACCTTTGTCCGTCTTTCCGTTCGTTAGACGGTTACCAGCT TTTTCTCAGGATTGGCACATTACTCTTGTCTCCCGAATAGACGGGGGGGG GGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGGGGGGGCGTCTA TTCGGGAGACAAGAGTAGTTTTATTTCAGATTTTTTTTTGCACAAAGACA CAAAATGGCAATGCCCGAAATGGTCCAAAATGATGGGAATATGTGTGTGA AAACCGTTTTTGAGCATTTTCTCGAGATTTTGTCGTTAATTGGTGTATAG TGATGATCAATGCCTTTATCTATACTTAATTTCGCGGTCTAAATTTGACT TTTGTCCGGAATGCACGAAATTTGATACAAGAATATTCTATCAAGTTTTT AAATTCAAACTATATCTTTCTCACCAACAGGTGTCGGAGATGAGTGTTAA AGACCAACAAAAGACACGTAGACCGATAGACATGACGAACAAAGCGTATG ATGAATTAATGGAGGCGCGAAAGAACGATCAAACACTTCCTATTGATTAT ATCAATGCTAATATTGTAAGTCTTAGACGATGCTATCTCCCGTTAGAGGA ATATATGCGTGGAGTTTATAGCCGTAATGGGTGATAAACGGGAAAAATAG CGGCAGTATAGTCTTTGTAGAGTTACTGTTTATTCCGTTCCGGGCTAAAT TCCGTTTTCAAATACATCCCGCCTATTAATTTTTTCCCTTTTAGTGACCT TGTATAGAGGATAGATAGTATCTTCTATGTAAGTCTTGAAGTCTACAGAA AATATAAATTTACTTATCCCTGTCGAAATAAGTTTCCCTTTTCAGACACA GGCGTATAGTTTTTGATAGAGTCTGGATTGCTTCTTTGTGTCCCGACTTC TAATTTGCACCTTATTATAGTTTTCATGTGTTTAGCTCAGACGGAATCGT TTTGCAGTAGTTTTCCCTTAATCCCAGGCTAGAGATAAAATAGTTTCACG TCATTTGAGGTAGTAAAGACAAAAAATGTTACTCGAAAATTATAACAAAG TTTTACCCTTGCAAAAGACTCATGATATGCCAAGCGCCAGAGATGTGTGA ATGAAATTTATTTACCCCGATTGAAAGAATAAGTTAAGTATCCCTTTCCA AACACAGACGTAAATAAATAATTATCGGTAGAGTTTGGATTGCTTCTTTG CGTCCTTTTCCTCTGATTTCACCAGTCTCAAACATCGCATCCAACATTAT GTTATATATAAAAGACCACCTATTGGTTAACTGCACTTTTTTAACTTGAC AATTCTTTTTGTTCTATAGAAATCCCTTATAGCATTATCACGTGCACGGA CTCGAGTAGTTACGCCGAAAATCTCGTTTGAAGATGGCTCAGCCGTCCAC AACTACAGCACTCAAACACTCAACACCTCCNGGTGTCGGAGATGAGTGTT AAAGACCAACAAAAGACACGTAGACCGATAGACATGACGAACAAAGCGTA TGATGAATTAATGGAGGCGCGAATGAACGGTCAAACACTTCCTATTGATT ATATCAATGCTAATATTGTAAGTCTTAGACGATGCTATCTCCCGTTAGAG GAATATATGCGTGGAGTTTATAACCGTAATGGGTGATAAACGGGAAAAAT AGCGGCAGTATAGTCTTTGTAGAGTTACTGTTTATTCCGTTCCGGGCTAA CTTCCGTTTTCAAATACATCCCGCCTATTAATTTTTCCCTTTTAGTGACC TTGTATAGAGGATAGATAGTATCTTCTATGTAAGTCTTGAAGTCTACAGA AACTATAAATTTACTCATCCCCGTCGAAATAAGTTTCCCTTTTCAGACCC AGGCGTATAGTTTTTGTTACAGTCTGGATTGCTTCTTTGTGTCCCGACTT CTAATTTGCACCTTATTATAGTTTTCATTTGTTTAGCTCAGGCGGAATCG TTTTGCAGTAGTTTTCCCTTAATCCCAGGCTAGAGATAAAATAGTTTCAC GTCATTTGAGATAGTAAAGACAAAAAAGGTTACTCGAAAATTATAACAAA GTTTTACCCTTGCAAAAGACTCATGATATGCCAAGCGCCAGAGATGTGTG AATGTACCTAGATAATCTAAATTTATTTACCCCGATTGAAAGAATAAGTT AGGTATCCCTTTCCAAACACAGACGTAAATAAATAATTATCGGTAGAGTT TGGATTGCTTCTTTGCGTCCTTTTCCTCTGATTTCACCAGTCTCAAACTT TGAATCCAACATTATGTTCTATATAAAAGACAACCTATGGATCTTTTCAT TAATTACGTTACGAACATCACTTGCCTCGTTTTGAAATTATTATCATGGT GATTAATTCCCAGCGGATTTTATTAAAACTACTTACTATTCATAAAAAAA TCAATCAATGTCTCAATGGAAATAATCACCATGGTAATTGTTTGAATACG AGGCAAGTGATGTTCGTGACGTAATTTATGAAAATGTATATTGGTTTAAC TGCACGTTTTTAACTTGACAATTCTTTTATCTATAGAAATCCCTGATAGC ATTATCGCGTGCACGGACTCGAGTAGTCACGCCGAAAATCTCGTTTGAAG ATGGCTCAGCGGTCCACAACTACAGCACTCAAACACTCAACACCTCTGCA ATGGCTATGGAACAACTTAGAGCAAAATTAGCACAAGTGAGTGGTGTAAT TTTTCTCTAAACTCTTCTTTGGCAATCACTGATATAATGTGACTAATAGT CTAGCATGCTAGATGACTAAATTTAGGAATATATTACTGTTTTACATAAA CGAATCGAGCTAATGTGACCCAATAAACGCACCCCATTTTTGAGAAATAA TTTCTAATATATTTTTTTGATTTCAGGAGATGAGCTGTACCCAAACCCTT TCTCCCCGGCAATTACATTCCTTCGTTTCATTATCAATCCCCATTCCCAT TATACCATACTTACCCAAAACAATCTAAAAGTCTACTCAACATTCAAATC ACCTCTAAGCTCAATTTCATCATACAGTAGTTTTGAGAATCAATTTTATT GTTTAGAGAACGTTTGGATTGTTACGGGAAAGTATACTNATCACCTCTAA GCTCAATTTCATCATACAGTAGTTTTGAGAATCAATTTTATTGTTTAGAG AACGTTTGGATTGTTACGGGAAAGTATACTATAGGCGTGCAAACTTTCGC GAGCAGAAACTTTCGCCAATCAAGACGTAAAAATGAAAATTTTCACAAGA AAAATTGGACAAATACTTCTTTAATAGGCTTGGAACTTTTGTCTTTTGAA TCATTAAGCTTTCACAGGCTAGAAAGTGTCATAAATGTTACATTTTATTC AAAGTTTGAAGTTTTATCGATTTTTGCGAAGCGAATTTATGACTGAAGCA GTTTTGCTACATTGTGTGCACGTAGCTTTAACTTCTATCCCAAGCGAAAA TTTACTATATAAATCACATCTACAAACCGATGAGATTCGAATAAAAATTT TCGAACGTTCGATTTTTTAAGGCACCATTTACATTAAAAAAGAACTAGAA GAGAAGAAAGAGTGTTGCGCGGCGGGACGGCGGTAGCGGGTGTTGTGCCG TCGGTGTGTTTGGGGTATTATAAGGCTTAAGACCCCTGTATCTTTTGGGG TTTATTTTGCTAGCAATTTGCGAATTGAGGTGGAGTCTGGATCGCTTCGC AACCTTTATTTATACAATACGGCTAGTCTATTTTTTCAAGAGTTTTCCGC NTAGCAATTTGCGAATTGAGGTGGAGTCTGGATCGCTTCGCAACCTTTAT TTATACAATACGGCTAGTCTATTTTTTCAAGAGTTTTCCGCGAACTTTCG AGAATGGCCCAAAAAATTTTCAAAGACATTTACTTATCGCGAAAGTTTCT GCTCGCGAAAGTTTGTACGCCTAAAGTAGTACCTTTTTGTATTCAGGATC CAGGTTCACGATACACATATTGTCATGATTATAATTCGGCTACCGTCGAT CCAGTCAACGTTACACAGAATAAAAAAATGGCGGCATTAGAAGCGAAAGA AAAATGGAAGACTTCGAACGGCTTTGTGTTCCCTGGTATGAAAACGGCTA AAGAATCGAATCAACATCCTCAACAATTAGACGAGGCTCGGCTGGTTGAA TTGCAAAAGGTGAGACCTTTTTTTTCGAACTTACTTCAAATATCTTTTTT TCTCTACATAATTCTCATCAGCTTTGGTTTGGATTAAAAACAGTTCTCGT TTTGCTTTTGTTGGAGAGCTCCATGTATACGTTGTATTCTCTTTAGCAAG GCCCAACGATTTTCGATTTTCCTTCTTCATTTTTCATCATTTTTTTTTTT TATTTTCGAATCTTTTTGAAAATTATTAAACATTTTAATTCGTCCACTCG AAAGTATTGGGACAGATTCCTAAGTATCGCCCCCCCCCCCNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNGTCCCCCCCCCCCCCCCCGGGGGGGGGG GTACTTATGCAAAAATGGATGATGGGTATGTGCGGACGGTAAGGGCCGGT TTTTTCTCTCTAAAGGTCGGAAAAATCAAAAAACAAAGGGTCGGAAAATT CAGGATTTTTAGAAATAGTACCCTAGTACCCCAGGTGTTTCCCAGAATAG GTTTTTGTTAATTCAATTATATGAGATTGAGATTAGCATAAACATTCCTT CCATCTACTATCACCTTTCGACATTTCACCAACTCTGTGTTACATCTTTT CTAGCCATGGCGTGAAAACGTTGCACACGCCAACATTCTGAAACCAACAG TAGATCGTATTCTCTTCAAATGGATTGATCGTGATCAAGACTTCAACAAT TGGTCCAAACCGCTTGATTTCTTTGGCGGGGACATCGTGGCACCTGATAC GATCCATGCAGCAGGTGAAACATTGAGGGCGGAACAGAGTGAACACCAGA GGGCGGAGGTTGAGAAATGGGAAAAGAAATTGGTAGTTTCTGATCCAGTC TTTCGTACGCATAGGTAAGAAGGTAGTTGAATATTTCCACAAAGTTTCAC TAGATCATTTAGTCCATTAAGTTGAGTAAAAACATAGGGTTCCTAGGCTT GCATCCTTCAAAACTGGCATCCTCATCTTCTGTATTACTTGCCGTTGTCG CTGAAAAGCTTGACCTTTTTTTGGAAATTGTTGTTACTTTTTCAGATGTT TGGTTGCTACGGAGATGAAAACGAAAGGACGTGACGCATCCAATCAAATC GATCGAAAGGAAGGGATCCTTAAAGACAAACCCATTAAAACGTCTCTAGG GCGTAACACCCTTCGCTTGGCACCCATCCCTCACACCGCCTGTGTAACAA TTTGTGATTCTGACGAATATAACGTGAAAGATCAAAACGTCGGTTTTCAT CCAGGCGATTCGGAGAACATGTCTTGGACGCGAAATCAAAATTGTATTCC GGTTCGCGATTACGATCATTCTCATTTTGAAAATACTAAAGGACAAGATT TCAGGTAAGTGGTTAGGAATCAACGAAGTATAAGCCCGAAGGGCTAGAAT CGAATCTCCTTGGTAGGATTTGAAGCCAACAAATCCTTCCAAAGTTACGC GGCCTTGCACGACCCGCCGGGTTTCTACACAAATGACAGATCGAAACTAA AATTTACCGCTTAATTTCGAAAAAAATATCACTCGAAAACAAAGGAATTG CTAGATTCAATCCGTCATCAAAAATACTGCGTATATTTTAAGGCTTCACT TTTTCTTGCCTAAGAAAGGTTAAAGATTCTCCTCTAGCCCTTCGGGCTTT AAACTCAATGTTAGGAATACACAAAATAAGATCAATGGTAAGTATAGCTT TCAGATGGTAAATTTATCATTCAAAGTTTTGGTTTTGAAAATGGTATCAA TGACGTCTCATTGGCAGGTAGACAACGAATATATTGATTGAAAAACATTG AAACTTTAATATTAAAAAAAAATATGGGACTCGGCAAGCGCCAATACGGT TTCAAGTGCGTTGAAATCGACATATCCGGATTGCACTGCGCCCGAGCCTC ATTCGTTCTTCACCACCGTGAAGGTCTGAGCAGGCGGGTGCTTCTTACGT ACGTACGCAATAAAGGAGGAGGGGGTTTATAAAAAGTTTACGTCTATTGT TTAAATTACGTCATTTCTTGTTGGCTGCCTACATACATATATATTTTAAA AAAATTTCACCATTTCAGCAAATTTCTTTCAACTTTCTGTTTGCTAGTTC AAATTTTTAGAAGGAATCATGAGAATTAACACCCGTAGCTAAAACAGACC CTCTTATCCTTTGATGAAGTTTATTTCAGAGTTTCTTTTTTCCCACGTTT CAGACTTGTTCACACTGACCGTGAAAAGATGAACATGAAGATAAAACCGT TGTCGAAAGAAGAAAGAGCAACGCATTTATTCTTGTAGAAATTTCCATGC ATTTAAAAAAATCTAATTTTAATCAACCCAATATATATTTTTTACAGGGA TAACATATTTTTATTAATTTATGACTTGTATTGTTCTATTCAGTGTAAAA AAACCGTAAACAAATGAAAAAAATATTTTTAAGTATAGTTTGATATTTTT AACTTTATTTTTGGGATGGTTGTGTAAATAATGTTTTCAAAATTATTTTT ATACCTTATAAAAATTGTCTAGTTCCATATAATGAAAGATTGAAACCTTA TTAAACTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008887TCONS_00008887Clytia hemisphaericatranscript
TCONS_00008886TCONS_00008886Clytia hemisphaericatranscript
TCONS_00008885TCONS_00008885Clytia hemisphaericatranscript
TCONS_00008884TCONS_00008884Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008884-proteinTCONS_00008884-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000088supercontigsc0000088:129299..137557 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.92 11.86 8.15 8.86 132.02 103.6 42.45 45.09 25.91 37.51 26.94 33.3 3.97 4.49 3.59 6.4 4.73 6.59 5.46 4.79 4.58 4.99 12.3 10.29 97.19 70.26 11.07 11.92 7.99 8.99