XLOC_004968 (gene) - C. hemisphaerica

Overview
NameXLOC_004968
Unique NameXLOC_004968
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000088:358202..368106+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004968 ID=XLOC_004968|Name=XLOC_004968|organism=Clytia hemisphaerica|type=gene|length=9905bp|location=Sequence derived from alignment at sc0000088:358202..368106+ (Clytia hemisphaerica)
CCGCAATTGTTTTTTAGTGGCATCAATGATTAAATTTGTAGTTCTAATAG TTCTAGTTATCATATTCCATTTGACGCTTCTGCAAGGCATACCTTCGATA AAATCAGGTCAgacatttttctctttcttcttACAATTCTTAATATATGA CTTTTGTAGAATTAGATAAAGATCATCTTTTACCTttaggcttggggaca cgagaaagttttttcgcgttggtgcaatgcaacatgctttatcccaccaa cctgaaacgccttctcgtgtctccatcccatttttcttttaataacattt gtgcttctctcattttcgtccctgggacaaaatgtgtgacagcgtgtctt ttgggtattttcatcactttttgtcccatgaaaccaaaaaagaaaccatg agacacgcactttttttcttgtgttagtgggatggagcatgttgtattgc accaacgcgaaaaagaaattctcgtgtccccaagccttggCAATGAAAGG TAGAGGAAGCTAAAAATAAGAGCTAGGAGAATCACATTATCAAAATgtag attttgaatatattGATACATCGGCATTTATATATAGATCTAGCGATCTA TAGATAaagcgaccgtagcatgaaggtagagcatccagctacggtgcgca aggttgagGGTTTGATCCCCAGCCGTGTCATACCAAAGAtccccaaaatg gtacttgatgcctctctgcttgatgctcagcaactaaagagacgggtcaa gggtaagtggagaaatccagggaaaggagtggcgcacTTCCTTACCTTCG GGTCGCCCttgactgcggtcgcaaacttacttacttactacatCGGCATT TTTATCCGTATTCTGGAATTTTTCTTGATTATAGCTGTGTCGTATTTGGt gtatttgacataaaagtaaTTTCTACCCTTggaactacaatcatggacaa aaatgtttgagaaaaacacaGGAATTTGCagtaaaatgtagaaaaaaGCC CCTTTCCTCAGCTGCAATGTTCAGTCCGCAAGGCTGTCACACCAAGCGTT GAAAATTGCAAATGggggaaaggggggggggagccGCTTAGAATTAGCTT TCGTCTCAACATTTTTGTTCATGATTGTAggtgaaatatttaaaatctaa aaagcAAAAGTTGTTGTTACCACAGTGCAATGAAAAAGTTTATTAGGGTT TAGGTGAATCATATGATATGGTTTCaacaaaaaaagtaaagaataacGCA CGTTTGTCATCGTGTACACCACCCCGTTGTAAGAAAGTTACCATCCCCAT TAATTATATAGAACTTCAAACCGTTTTTCCGGCTTTCAAATTGGACGTGG TCCTTCTCTTGCGACTCTACAACAAATCTatacaaactttcaaaaatatt tacctGAATCCGGCTCTTctatactttacttttagaATATTTGTGTATGT TGGAAAGATGGCATtgaattcaacttcaaaaaatctttatgATCATGTTC GAAAATTGAATGTTCAGTTCGAGAGAACCAACCGACCAATCATCGAAGCT TTTGGCGAAGAAGTCCACCTTTTCATGCATATACATCTAAGAGGTATTAc cctttttaataagaacatcaaaagtttttgaagccttcagatgctcttaa cttttatAGTTATgagtctaaaaatgtttttaaaatggaGGACtccattt cttcattttttgagaaataaaattgggttttttgaatctccaaagcctta aatgttctttaCTTTTAGTATTACGATAATCTTTCAAACTTCAAAGAAAA TTGTACCCGCCTCATCAATAGCCAAGCCCTCAAATAAAAGAGAACCCAAA TTAGATGCATTATTAGTCTTTAATAAACTTTTCTTCATAAGAAAGATTCC GCAGAGTACAGAACACGACTGTGTCTTGAGCTGGTGTAGTACATACAGGC TTATGGTCTTTTACAAAAGAGAATATATGGCTTATTCATAGGATACGACA AAAATGGTGATGGAAAACAAATGCATGCTGAATATTATGATAAATTTGGC GCCccaatgaaaaaagaagattcTTGGCTTGATGGGTAAGCATAATGAAA TGAGCAACTGATATTTTTAAAACTGAGTTCGCATACTGAGAATAGGTAGG TTTaagtaccaaaaaaaaagaatgcCTCTAAAAATTTATAATGTGGTCCT CTATATCATTCGAAGTGTCGATAAGGTTTATTGGCTaaagaaacactttt tattCACACTCAAAATTTTGAACCTATTTGAGATCAGCTATTTGTAGCAT CGTCTTTTATCCCCAAACTTTATGTGGCAATTTAATTTCGTCGTTATTTT CTGCTCAGTTTTCGGTCAGTTGAAGAAGAAATAGCAAACCATTTTAACAA GTGTCAAACAGATGGGTTTGATTTCCCAATGCCAGCTGCAGTCGCTGGCG GTTCTCATCTTTACGCCATGTATCATTATGATAAACCTTGGAATTGGACT GGGTAAGTTTACACTCCCCCTTTGGTATGATTCCATTTCCCCTAGGTACG ATTACCCTGTCCACGGTTTACGTTTACCTTGTTAATTTTACCTTTCCCCA TAGGTAAGCTCACCCTTCCCCTGGGTAGGTATATCCTTCCCCATAGGTAA GTTCACCCTTCCCCTGGGTAGGTATATCCTTCCCCATAGGTAAGCTCACC CTTCCCCTGGGTAGGTATATCCTTCCCCATAGGTAAGTTCACCCTTTCCC GTGGAGGAGTTCCTTTTCCGAAGGGTAAATTCATctctgtctcacaaccc cggtggaacttctcCGTGCAGTTTGGGGAGCTCAACCAAGTCTGTggtga tggttttggagtgcaaattttctattgaatttcaaatacgTGTGGATCAA AGTTAAAATCAAAGCTACCttttcagtggggctgaaacTGTGAAGTACTT TTCCCATCAAGGACAAAATTTCGGCCGAATTTTCTAGTGCCACCGGCTTA GTGACACAGGGTAAATTCACCATTTCATCTTTTCTTCTGGTTAATTTTAC CTATTTTTAAGATTTGTGCCTGGTCAAAAGAAATGGTGCTGTCATAATGA ATTCTTTCAAAACCGACATTTCATGCAAATCCGTGGTAACGAGGTAAAAA GGCGGCCTTGCAGTGTTCTACGTGTATCGCTCGTGAAATTCAAACATCAT ACATTATGCAACAATATCGTCTTTCACAAATTAGCCTCAAATAGAAAAAG TACCAATGTTCTAATATTTCTATACCCCTTTTAGTGCCCAAGtaatagaa aaaagaaacacAAAGTACGACATAGATACATAATCCATCTGACCGTAACA GACCAACACACggcaagattttcaaaaagcaaaaatcGGTCTTGTTTGCT CTGGGGTGGTATAGGCTAATAATTTCCTTTATATTTAGATCCAAAACAAC TTATGGGATTATGATCCACACGCAGAGAATGAGGGAAGTTTTGAGTGGGA TTTGAAGTATGACCAAATCGTTCCCGATGATGAATATCACGGTAAAAGAT TTATGATACATTTGGCGATCCTATGTTActagttttcatttttcacaccC ACTAAACAACTCTGCGATGTAATTGACACaattttgatacattttgaagt gaaaatttgataaaaactagtctCCCCAGTCCTCTGGTTCAATGTTAATT TGAAACACCGTGAGTTGAGAAACACCGTTTTTAAATCACTTTGATCTATC ATGATTACACAGTTTGAGCTTTAAAAAACTCTTTCATTTTACGTAAGGTG GTTATTGGTTTTTCAATAACCCATGGGGAAGATATCTTCATATCATTTCA TTGAAATCAATGCATCCTGAACCTCAATATTGCAAACGTTACAATTACAT TGTTCATCCGTTGGCTTACCGGGGAGCTGAAACAACATTAGTGGATGAAT CGGTCGATGCAATGCAATGGTCCATCTGTAACGCTAATAACCCAGAACAT AACAAAGTTCCAGAGGGAAGGTATATACAGTCAAATCACTCTAATTCTGT AAATTGAACTAGAATATTGTTCTCATCAGCTTGAAAGTGGCTTAAattac tctctctctctctctaattcgaatctttctctaattcgacgaaAACTTTT GGTCTCATCGAATTAAAGAGAATCAACTGTACTTTGAATTATGTATCAAC GTACCTTAACCATTCTAGTCCAATTTCAAACGTTCTCTTGTCTCCATGAT AGAGGTCCTCTGCTAATAAcagattgaaaaagaattaaagCCCACCCGTT GCTTAAAACCAAAAAACCGTTGCTCTTACACGAGGTTGCTCAagctttaa tgttttttctcaaCAATTTCAGGTTCTTGAttggtaaattttcttttcat aagTGTTTTATATGGCTTTAATGAGGATTAAGATTACatttttttagtaa atttttaAGACcgatttttctcaattttcactTAGGTCTTGGCCAAACTT TTAACCTCTTGTAATCAGTTACAGGGAGTTCTTGCTATAATTTTAGcttt tattattcgaatccTTTTACATAATTCGAATTAATTCTCAGTTCTCGTTA ATGAGGAAACCTCGTTTaatattttctataattcgaatcttttggaaatt tgaacAAATGGAATTTTTCATTCGAGTTTGTATTAGCGTTAGGTCGACTG TACTCTTTCGGTTCTACTTTACTCAATGGAGATTATGTCTTATTTTAGAT CGACAGTGATGACCTTTCCAGCTTTTGGTGCAGACCAATTAAGTCGATGG GGAGATAGATGTCACGGTGTAGAAGTCTTCAATGATTTCACGTAAGAGAA TATCCTTAATTGATCCCTTCTCTTTAAAATATACTATACACACAACCTTA CTATATCGTGATACTACATCGGGGAAAGCAAAGATGGGCCTAAGGGAATA AATTTTGAGGCTAGAGGCAAAAATCTCTCAAATTGAACCTTCCCTTTCTA TTTTTCCGAgtaattttttatgagattttttgtttttaactttttgagtt tcaagcctaaaaatgttcttaacatattcttaatataatttttatctatt ttcttatgagtgtttttgagtccgcAAAGCTAAAATAGTTCTTAATAGTA CCTCGGCCTAAGGTCTCGaagaagccttatgttcttatataaaaattgta aattgaCAATATGTTACTGTAGGCTTTCGTAATGGCAATATCATATAGGC CTCAATTCCCAAGTATTTTAAATCCTTTTTTAGATACTATTATTCAGCAT CACCCTTGGATGAAGGTACAGATGACCCCTGGAAAGGTGGGAACGGTTTT CTTTATAACAAAGAAGGAACAGCCAATAATTATTTCCATTGGTTCAATTC GTACCCCCTGGAATTTGGTGAATTTCTGGTGGAGACTTCGTTGAGATACG GAAGTTATATGCAAATGGTGTCCGCCAATGATGCTATGTATGTCCGAGAG ACAAGAGAAGTCGATAGAGGTCAGTTCTTTTTTTAGTTTCAAATATCCAT GAGGATCTTGGTTTCTTTATTCATAAATGCACAATAAAGTCCATCAATCA CTGGCAGATTTAAGGAGCAGAATTATAAAAGTGCAAAaacaaattgatca ttttagaaagattttctgttGAGTTACCAAAGGACCATAGAATACTTTTC ACACGCAGTGTTTGACATAAAATAAACCCCATAGGCACTACTTCAAAAAG CgaaatttatttcttttatctCTACAATCACATGTTCCGCTGCAGACCAC CATGGAAGCAAACATTAAAAagcgttcttttttttttgttgctttttttg ataacttaagatcattgaaatagaactttaaagataacttttatgtacaa ccagaagtaagccctgaatactaatgtatcaactactaacgaacaaaact taatttacaagtgggaatatctaaccaaacaactttgatagcttgaacgg tcaacttaattttctttatgatgaatcatatagatgaacccatagtcagc ggccgggtcagaaaattattatttttcacccagccggtttccggaaacac tacatttcttttatttatctTTTACTCCAACAATTTCAGAGACGAAAGAA ACAACTGCAGTGGTGCGAACTGAACCACGCCAACATACAActacaaaact caaaattgatCATCAATTCCATGCTTTGACTTTGAAGAAAACACCAAAGG AAACCTCGGACCCAGACAATCCAAATCGCACTTTCCTGGGCGGCATGCCG TATGAGCAGGATACAATATTTGGGTaagtttttaatgtttttttctgtGT CCTattatagtagggggccaagtcTCAGGTCCCGTGGTAACTTTTATAGG ACTAAGCAAAACCTGTTCTATTTCAAAGTTTAGTATATAATTAGAATTTt ttgtgaccaaaatagtgacgcaaaactgcaagggaaaataaggggtagag aaatagcttattttcaaaagtcaaaataaacgaaaatgattggtaccatc tgatagagcatgaaattctgagcaaaaattgtattacaacaactctctga ctaaaaccatggacatataaacgactggacatccatctcctttgtctttt tgaagataacacagctagcttcgttgccgcctcgttaaaagcataaaatg aaacaatagattttgatgatataccacttgggaataccttgctaacaacg tcaaaacttcgataaaagtctctgttgttctactcctctcaagtctttta tttatatcatagcaaagataacagaggcaaaatcatcgtcagcttgtcaa aactctgactaatatttcaaaattttgacttaaaagtgtctaataatttt cgagagtgtcacattctaatttcgatattcttattacacaggctctcaac ttcggcaagctatttttttcaagtcataaaaaaaattattggagtgacaa aagggattcaaaagtatacacgcagttgaaattctgcattccagagttga aaaagttgataaaatatattacaaacttgtaaaaaaattcgaaaataatt tttttgtgcattaggagtaatgttcaagttctatcaatttttttacctaa ataattcaaagaaaaaaaattatgacggaatattgtcggatttttcatac caattttgaaaaacaggcggcaacgaagctcgcttcaaagagacaataaa agatagatgtccagtcgtttatatgttcatgctaaaacacacaaagaaat acagctgatttaagaccaactaactgtcagcaTTACCTCGAGCATTACTt tgaatttgacgtcaaatcttgccttgatcgtactgacgtcagtatgtttt tgaacttcgaGTATTATGTTTAATTACATGCCGCTTAGTACTGCTATAAA AACTAGAATAACATTTATAACGGGATGCAGTGCGGTAAAACCACTTTACA GATTTCATATACAGGCCAATGTAATTTGTTCACTTGAAGCGATTTCGCCA CAGAACAGAGCATTAAGTAGTTGAAGAGAACTCTGGTGACAACGGCAGTC AAGTTCGCTTAACCGAATCACTCGTTACAGATGAGTTTTTAAGGCAGGAA CAAGTCTAACGATTAAATAACTCAAATCTATACTTGAAGGTACACCACGT TGATTGATCCTGAGATGAAACTGAAGCGTGCAGTTTACGGACCACCACCT CATGTACCTCAAGTCGCTCAGCTTGATGAAGGGGAAAGCGAAGTCTTGGA TTATTTAATCAGCGGACGTTTCTTCGGACACACGGGTGAGCAGTTGACAc tttctaattcgacgttctaccaTTCAATACGCTCCGTTATTCGAGAGTAT TAAAAGTCATCGTCAAcaaagaaactctcataaacgacactctattattc gatttgctcccttattcgatgaaaatccaattccccttaaAAATCGATTA AGAGAGTTTCAACTATAGCTTCTATACCACTAAGTCTTTGACGAAGTCCT TCCTTTATACCCACAGATATCTCATTTAAAACACTAGATGGAGCTACTCC GTCCCTAGCTGATGCAAAATAATTCGCCATCTTTGATAAGTAGACAATGT TCGCGCACGCctatcagttttttttttacttggttgaacaaattgccggt accaAACTGTAACCTACCTattttcagcaaagatggcgcaCTATTTTGCT TCACATGctgttgcttgggaaatacagagtagctctatctagtgttttat ataagatatctatgtTTATACCTTCTCCAGGTATTTATGAGATTTTCAAC TACCGTGACCGACACAACAGAATTCAACAAAATTACCCAATCATTGTTGA TCAACAAAATCCAAGAGCAGCTATCAATACCTTTCTTGACGATCTTCACG TGTTAATTCTAACCATGCCAAAAGCTCAAAAGAAGGGTGAAGAAAGTTGT AAATCTCAAATTATTGCTGAACATATTATTTGGCAATTCACCGTTGAAGT TCATAAGGAGGATACTAAACAGATTGAATGCCATCGTGGATACTTCAAAC TCAATGAAGACTACCGAACCAGATTGGATTTGACTGAAAAGATTGACGAG TCAGAAGTAGCTTGGATACGCATTCAAGCTTATGATGTGAGGAATCCGCA ACGCAGAGCTTGGTTCCAACCTATCAAAGGACCGATGTTCGGGAAAGTCG ATTGTAAGTTTACTTGCTGTTCGAATTCGTGGTTCCAATGACTCAAAAGT CCGTTTTGACACTGCCCCCAGTTCCCAAACCCCTTTCTCGCTGACCCTTT CATCTCTACTTTCTCCAGGGACCAAACCCCTGTTCCAATtaaccaataga cctttttacaaCTTTATCCTGCAAGATTTTGCAAACGACTCGaatttttt caatataattttcaaCTATATCTTAGCTACTTATGAAAAGTACGTTAAAG GAATTTGAATGGGAACTTCCGGCCGGTATCGATTGGTTGAAAGGTTGAGC TTGTCAAAAATCAttggtacacatttttttaataagaacaaataaGTTAT GAGCATTTTTAGCTTCgcgggctctaaaacacccgattgcTTAGGAGAAT GGAcatatgctcaaaaaatggtgaaaataagaaaatgatataaacatttt aaggcttaaaactcaaaaggttaagaacatctgaaagctttaaagatttt tatatgTTCTAATTAAAAAACGTTCTCTTTATAATTTATTTCATCTGAAA AACAGGGAAAAGGAAGGTCGATTTAAAAACAATACTTAACCCGACGGTCC ATAATTATGTGTATAATATGGCTGCAACAACAGAAATGCATAAGAGTGAG GATTTCATCGTGTATCGACCTGAAGATAACTTTGAGCCTGAAGCTTGGAA TGCATCAAATTTGGTGTTTGATTTGGATAAAATCCAagcagaagaagaag atcattTGTGTGTCTACAACCTTCAAGTTCATTCATTGAAACAATTGTTT GGTCCAGACAACAAGAAAACCAGAAATGCTTCAACGGAGCTTCCACCAAC TTATCTTCAAAACATCTGTGGTGTCATGCAGTTGTCAAGCCAGTATCCAA CCAAATTGGATTTGAACAGCAATTGGGACAAAACCACAGTTAAGGATGGA AATGCCTTCTTCTATATGGTTGACAAAGATGGAAAGCTCAAAAATATGCC AGAAATGGCAAATACAGTTGAATGATTTTGTCGTTTCCTAACCAAGATGG CCGACTTTTACAGCACATCATATAATTGACTTTATAGTAGTTTTAGTTTA TGAATTTACTGTCATTTACAGTCATAAATATAATATTAACGCAAATATAA ATCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008850TCONS_00008850Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008850-proteinTCONS_00008850-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000088supercontigsc0000088:358202..368106 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.67 0.46 0.27 0.16 0.06 0.06 19.04 21.96 49.96 29.51 22.25 24.15 7.61 6.5 23.8 27.42 1.99 1.71 2.56 2.22 0.09 0.02 0.2 0.36 0.27 0.2 0 0 0.05 0.03