XLOC_004903 (gene) - C. hemisphaerica

Overview
NameXLOC_004903
Unique NameXLOC_004903
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000087:575809..583420+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004903 ID=XLOC_004903|Name=XLOC_004903|organism=Clytia hemisphaerica|type=gene|length=7612bp|location=Sequence derived from alignment at sc0000087:575809..583420+ (Clytia hemisphaerica)
GGAGAAGATAGCTCGTGTAGTTCATAAATAGTTTTTTCAGTCAAATTCCA ATCCTGTTTGTTGTGTCTCTACTCGAAATTTTCCATGGTAAGTCGGTAAG TATTTTGTATAATTCTTAGGGATATTTTTCTGATTACAGTGCAGTAGGAT TTACCAAATATTTGAAACTCTCTGGCAATTTTTATGCACCTTGGTTTGCT TTATATTCCTTTCTTTTCTCTGCAGGAATTGGGAATAGCAAACAGAAATG AAGAAATAGTGGTTTGGTACTCCAACATAAAGTTTTCAAATGATTGTAAT AGAGGGGGGTtcccagtgcacgaacgagcgtctttgaacttgaaaaaaac aaccaaaacaaacttctatagaacttcctttgtgcagcagaatcctcaaa ctatcccttgcaatctctccaaaaattaaaataaacggaGCACTAGAACA ATAACAAACCAATTTTGAACAAGACCAAGTAAAATAATCACGAAATtcgg gatttttgtaaacatggctgatcgcgagagaaaatgttttttataagaga atttgcgcaagaagagttctgaaaatgactttcctcttttaaaaacctgt tatcttccatcacacaaaatttcattgaaacatgttagcttattaattca aaatcaatagaaacatatcaccagtagttgatataaaaaaggttccAGTT CGCGAACGGTCCgaacaccatattcaaaatgaacccattgcaacgtcaaa acatGCGAAAGCGCTGGtgatctcaattaaaaaagaagacactacattgc cACGCTTTTCAATGagcaaaaaaacttgaaaaagaaaacaaaaaaatgga cgacaagaaaatatttacaaaaataaacaggttagtaaaacgctaaagtt cttataaaaaagatgcttttttggtgaaaaagcgCATGgctttgaaaagt tcaaatacccTTGTATTATCTCAGAAGAGAGTTaaagtatagaccttttt tcaaagaggacatcctgttgaataattttgtattccagccataaaaacaa tgatagagccatgcataatttctgtatcatgtatattgtatatattatgc atggttttatcattgtttttctgctggactacataattattcaacagggt ggcctctttgaaaaaaggtctattacctgcgagcggagctctaattttct ctttcaaaagatcgttcGCGCACTGGTTTGCTCGTTCGCGCACTGGGTCC CAATAGCGCTCGCTTTAACgacttattattccaagaagaagccttcaaat aataaagtgaaaacaaactgaaagaaggacttcaagcttgtttacgagat ggacaaaaaggatttatgtaaaaaccaaaagtaagagaaaagagaaaaat aagtttgccgttcgtgcactgggtaCCCCCTCTACCTCTAACACTGAATA AATTGAACAggaatcaaacgcaatcgaataattgccaCTCAATTGTCGGG CGCAATCGAGTCataatcgaatattacccagcaTCTTCCGTTCGATTGCT TTGATTGCTTCAATTATGTTTGATTGTATTTATTCGATTATATTAGCTca ggcatcgaaataagggatagaaagtgcatcgcaattttttgataagcatg attttgcatcctaaaatagatcaattttcaatttttagcttgtatGTAAG TATCCTAAAACGCATCGCAAATAGCGAAATGAGATATGCTAATTCGATCC CTGTAGCTTGTATTTGATTATATATGTTCAATTACGTTCAATCTGTCAAT TGGTCTAAATCTCTAAGAGGATGGGCTTAAAAATTGCAATCAATCTTATT GAACATTATCGTAATGAAACataatcaaatattacccaggaatcgtcCGT TTGATTGTGATTCGATTAGGTtacaataaaaaatatgttgCGTTCGGGTC GTCAAAATCATGTCAATATTCAGCAACGTGGTAGGGCCAATATCCTGGGA CCGAAATTAAGGGCCGCTTTACATTGTATATAAATGGGTCAGTATTTGAG GTCTTGCAAAAACTTAACTTaagaaatagcctatccggtgATGCACGGAT GTAGGTGGGTGTCTTCTCCCCTGTGTCTTttccccgtagatctttttctt gggaagttgttcttcaaattagttttcagggTTGGctcagatcaatgttt ttcatctatggctcaaattttaggtaatttctcatagttttgaaaatgtt aatttcattatttATTTTGTCATAAAACCATAAAAGTTTTTAGGCGCATT ATTTTTGCGTGTGAGTCAAGTAAATGATAAATAaagcgcttttgcagcat taatctttgatatgatGTGCATTCCCGTGGGATGctagtgttttttttat aaaactcaACGAGACGATCAAaaaaaattgggcttttccagaatcCAGTT GGGATATTGTCAAGACCGAAAGATTTGtcatttgaaaatgatttgacACT TTTAGTGAGCCCATCTAAGGTAAAAAGAGAGGTGGAAATACCAAGCTCAT CGAAAATTTGGGTGATCATTTCAACCTGTAAGTTCAATATTTTGTCTTCC ATGTATCAGATATGAGATAATGTGAATTTGAGATAGAATCATTTTCTCCT GAATAAACATTTCCTCAGCATTGATGAGCTAGGTATACCCAGACCCAGTC ACTTTTGAGCATTTAGCAGGTGTTTTCCTTGTAGGACGAGTTTGGTGTTT TTTCTTCACACCTTTGAGTGCCTTACACACATGAAAGAAGgttattttca aagttgaaaaaacTTCTTGCTGGGCcagataaatttgataaagaaaaagt gaaaactataaattaaattttattcatttcttgacgtttcggtgtcttct ttgcaccatgataacaagtatagtaaaaaaattcaaatcaaaaaccAAAC TCAACAAAATCAAACCTCCGTGGTTACAACTCACATAATGactgaaaatc atgatttttccATAATATAATATGAAAGTTTTGAATAATAGTAATCATCG GATTGATGAAGAGCTTTATATAAAAGAAATACTGAGCATAAGGGAGCTCA AACTGGACTTTAATGAGCGCGTCTCTTCATCCCCCTTGAGCTCTTTTAAG ATGTATGTGTTCCTTTGTAAAATCTAACAACTTGTAATTACCTGGTagta atttttaaattttttgattttttgaatgttgtaaattgaaattcgatttg attctttttttactatacttgtgatcatggtgcaaagaagacaccgaaac gtcaagaaatgaataaaattaaatttctagttttcccttattttcaaaga tgtttttctttttgattttttgctttgGGTAAAGAGAGAGACTGACTTCC TCATTAACCTTGATCAGTGTTTGTATTTGTCGATTTGTTCACGGGATCAT CATCTGGCTTAGAGAGTAGGTCAATTATATTTTTCACCTCAATGATGTAA AACAAAGATCAGAGTTGGTATAAAGCTGCTGCCAGTCTAGCATTCCAAAC ACTGTTTGAACAAGAATATAATCAATTTGGGATTTGCCTCCAGATAGGTG TTGAAAATAccagttttaaagttttgtgaaAGTTGTAGCAAATAATTGAA ATTGCTATTTAGCCTTTGTCATTATATTCTtattagaaaagaaattaaGA AGGTACTTTTGTTATTTCAAAACTAGTTTTAATTAATAAGACATTCACTT GAACTTTTCTAGATATTTTTAAAGATGAGGCGAAAAGAAAGTTGGGTTAA TCTAACGAGAAATAAATTGGAAAATCTTCTTCATCATCATATACCAACAT CAACACGATATGATTCAGATAAATTGCCACCAAGGATACAGAAAAATGGT ATATCTGTAGCAGCTCGTGTTGTTGGAAACGAAATTagaaattttactaa aaagACTACAGGGAAAGACTTGGCACAATTGAGAAATAGCCGAACAAGGC AATTAATGTTGACAAAATTCTCAGAAATAAGGGTAGCAGTAACAAATAAA CAAACTCAATATCAGTTGTTAGCGTTAGCTTGTGATACCGGATCGAATCT TGTGACGTCATTATCGCCAGAAGGACCAGAGTGTgattacaattttaaaa ataatacgTTTATGAGAGACTTTATTGCTCAATATCACCAACAATGTTCA GACTTTCAAACAGTTCCTGATTTAAAGCCACCCCTTAAATTAAAAAAGAG AGACAAGATTTTATCACAACTGGAACAAAAACCCAAAATATCTGATGTTG TAGTACAGCGATGTCGTTGTGAGTCTATAatagaagatgaaaaaaaagcc AATAAATTGAATTTCCTTGGATGTTGGTTACATAAAGGGATAGATGAAGA TGAAGTTGAAAAGTAAGTTTATTGTTTATTAATCATAAattgtttgttta tgttttttagcAAAACACGCTAATAGTGTAATTGAAAATTGGTAGGGCAA AGTTTCGTTTTGAATATCCCTGAGCGTTTTGATTGAAAGATACAAGAACG ATCCTGTTTAAAGGTAATTGCATtgtcatattttttattttagttattGG AATGAAAATGTATCTCATTTTttgcaagaaaacaaaaagcaaCTTCATCA AAACCCCAACAATGAATGGTCACATTTTCTGGACAATGAAAAATATGTAG TCTTCAGGAGGAGACTAAAAAGTGGACTCTATGAATACAGAGGTATAAAt tagttttgaatgtttttgaatcTGGTTGAAACGTGTTTTTCTAAATCATT CGTTTGAAATGTGCTTGTTCAACTAATTCCTGTCTAGGTTGTGTATTATG TAGGTATACTATGACAGGCACAGTGTCGGGATGAAAAACTGCAGGATATA AACTTATGGTATGGTATCCAAACTCATAAATTTTAAGTTGTATATTATta tccttgtttttttttagttcaagCAACCTTTCCAGATATATCCGCCCAAA AATTATTTCAGACTCAGGTTTGTTCCTTTATCAAGTTTTAAACATTTTGC ATTTTGGTTTTGAAACAAGATTTTCCTTGacaaattttccttttcattta ATTTCCTAAAGCtcctttttgttttaattttttcggcACTTTTGATAGCC AATATCTCTATATAAATGCTACAATGTTATCATATAATTCTCTCCTCTTT TATCAGGTGGATGGTCCTTACAGGCGGAAATGGGACGATTATGTTCTCCA ACTAGACGTTGTTGACAGTGACAAACAAACATCCACTGATCTCGTGCACT GGGTCACCAAATGTCCATACCCTTTCTCTACCAGAGAATATATTTATCTT CGAAGGAGCAAGGTAAGGCAAATTTTATGCTTGAAGGTTGAGGGGTAAAC TAATAACGTTTGAAATTATTTCTTGGGGTCAGTTTGTTAAgagtttgttt aaaaaagacTATTAATTGCTGTGATAGTACAATCTTGTTGTTGCTCTAAC CGTCACAAAGAACTTTAAAATTGTCTATCATTTTGGAGCTTTACGCTAAG CTTTTTATAATTcattgtttctcttttttttttagattgaccttgaaaaa aagtttatgcTTTTGTATTCGAAAGCAACAGATAACACAGACATACCTAA CGACAAACAGGTCGAGCGAGTGGAAACTTATGTTTCCAAACTGATCATCA AACCACATCAAGAATTTGATAAGGTATATTTAAATCCCTTTAAAGTACTT TCATCAGACTTTCTTATCTGCTTATCATTGTACAGACATGTTTTGTTTTT CCATGATGTAATCTCGACAAACATTGCATCATATTTTTGGCTGAATCATT GTCATTGACATATGACACTgcgctttttttttaaatcgtcaGTTCTACCT ACTGTCAGACAGACAGACCACGATAAgtgttttaagtgttttaaTTACTT CTTCTTAATATATCTGAACTTtaatacactttttctcgaaATCGTCATGG GAAGTATGGGGCGTAAACTCAAGAATTCTTTGAGAATAAGGTCCAATAGG TTTTTGCATCTTGAAAAGTCACTTTTGAAAAGCAGAATCTTCACACTTTT TAAACTCTTCTATTTTTGTACACTTACTAGAATGGATGTGATTTCCTGTT GACGTATTACGACGACCCGAAAATGATGTTGCCGCAACGCGTGCTTGACG TGGCAGCATCAAAAGGTAAGTTTCAAAGATTGGATTCCAGCAAGAGGTTT AATATTGAGATTCCAGTGACGGTTTTAATCGTGTTAATAAGGGTTTTGTT TTGAGATCTCGATTGGTCACATATAGCTCAACCTTTATCGTACGATCACT ACCGCGCTCAAAAGCTAATGTCAAATGTACTCCGTTTTAGCTGACTTTGT TTACTTTCGAAACACTTGTAACAGGTATTTGAAGGTCATTTGCTTTAAGC CAATCTAAGGTACATCCAAGTATAAGCTGATTTCGAGGCTGATTTTGAGA CTTGAAGGCGATTCTTTATAATCCAGTCGGTTTTGAACTGAAAGCTCCTT TTTCGATAGCCATTTACTAAAAAGTAGGGAAGGGCGCCACTGGATTGCTC TACTAACCCTTAATTGTTCTCTGATTGCCGAGcattaagcagagaggcat ccAGTACCAAGTACAAGGTCTTCGCTATGACCCGGCCGTCAGGGATTGAA CCCATGAGCTTGTGCATTGTAGCCGAATGCAATGCTCTATTTTTGTAGTA GTAGTTCAACTcctttttacactttttcagGAATATCACAATCAATGTTG AGAATGTATCGTGCAGCAgttatgctgaatgagatggagaaaaaagagaa atgaaAAAGCCCTAGAGAAATTTAAGAGTGGTTTGATCGTTAGTGCTCTC CAGCCAAGTAGATGTCGGTTTGTCACCAGATCTTAGTGATTATAACGGAC ATCCCTCAAGAACAGCTACTTTGGAGAATATCTGAAAATACAACAATGAC AGAGCTGATAATTTCCAGCTATGGTTTGTGCTTTCGGGTCCTATGGACCT GTACTAACTCATGTGAACTATATCTTTTGGCTAGCTGAGTACCTCACCAG GATAGCCCTTTCAGAATCAGAGGAAGTGATCTCGCGGCTTATTGCAATTG CAAGGTGATAAGTAGTATGACGAAGTATGACTTGCGCTACATTCTtgaac tgaataaaaaagaaCTTTAGAAAAACCGAATAACCCATATTTAATGTGAT GATTTTTGTTCCGGTGGTGCATTGAGAGGCCGTTACATGTTGCCTCTATT TCTTTgactagaaaaattttcctaCATATTTTTATGCATAGAATTCTTAA CacttagttttttttcaaatatttcgtaTTATTGTAAGCATGTAGGTTTT CAGTGCATACATGCACTTTCTTTTGGAATAATGATATTTTGTGTCTTGTT ATTTTTGTGAATGAGATTATTTTAGAAATAGAatgttgaaaaatgaaatt attttctgAGTAGTTTCTTATCCATGTAAGGTAAATTGTACAAACGTTTT CGTAAATCCTTTTTAGTTATGTATACTCGTTTATGTAAACCCtagctaaa ataaaaattgct
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008746TCONS_00008746Clytia hemisphaericatranscript
TCONS_00008747TCONS_00008747Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008746-proteinTCONS_00008746-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000087supercontigsc0000087:575809..583420 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
87.6 84.73 26.53 19.99 16.64 12.84 25.71 27.23 18.89 28.13 25.18 17.54 16.56 12.67 14.68 14.97 26.09 18.46 11.25 17.23 21.67 23.13 56.18 53.13 21.94 21.8 21.11 20.06 26.73 27.11