XLOC_004822 (gene) - C. hemisphaerica

Overview
NameXLOC_004822
Unique NameXLOC_004822
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000086:509602..515733-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004822 ID=XLOC_004822|Name=XLOC_004822|organism=Clytia hemisphaerica|type=gene|length=6132bp|location=Sequence derived from alignment at sc0000086:509602..515733- (Clytia hemisphaerica)
AAACTGTTTTATGAAACAAATCAAACTTATACAGCCAAATAAACCAGGTT GCTATGGGTTACTGCATGCATGAATGCACAGCACAATTGAATGAAAACGA GCTTTGCTCAAGGTGAGTTTTCCGCGAGATTTGCAAAGAAAAAGTAAAAT TACATCTTGAGCTGTGAAACTTTAAAAACAATTAAACAAAACAAAAACAA TTATATGTTGGATTTGTCAAAATTATGACGTCATAAAAATGAGATTCGCT CACATGAGATNAATTTGCAAAAAAAAGTAAAATTACATCTTGAGCTGTGA AACTTTAAAAACAATTAAACAAAACAAAAACAATTATATGTTGGATTTGT CAAAATTATGACGTCATAAAAATGAGATTCGCTCACATGAGATGACAGTT GTTTTGAGTAATGGAATTTCATATATTTGTCGTCATCGCCCTGTCATTGG TTCAAATTGTGTGGGCCAATAAGAACGAGGATGTGGGTAAGTGTTTGAAG CTTGGGATGTTTGTGAAGGCTTTATAATGTATGTAGGGATACTCTTGACA TTTCCAGATTACGCAACATTCTCGGAGCTATCCAAAAGGTCAAGAAACTG AGTTCGAGAAGACGTTTATCTGCACCCAATAGTCCATTTAAAGATCCTCA AATACTTGCTATCATATCGATTGGAGTTTACCAAAGACGGCAAAGTCAAC AAGTTTGAGGCTGGAGCTTCAAGGCCACTCAGATATAACTACACTACTGT AAACTGGAGGTGGGCTTGGATAGGGAGAACAGCTTAATGTATAACACAAG TGCAAGTAGCCATCTTGATCTTTGAGAGTATTACTTGTATATCAGAACTA AAAAATAGCTCTTTGAAATCTCGATGTTTTCAAATTCGTAAGCTTTAAAA ACACGTGAAAACACAAACTCTCGAAAATAGAGGAGAATTGCAGAAAACTG ATATTTACGAGATTTGATAACTTTGTTTATAGGTGTAGTGAGAGAGATCT GGTCTAACGTGCATGGAAGTGATCTTCAAGATTTGTTAGCAGACTCGAGG TTTCCACATCAACCGACTGTGGTTTCGTTCATCAAGAATTTCGATGCACC TCCTGCATCACACCAGAAGAATATTGCACAAAGAGTCAAAGGTAGGTGGA AAATCTGCCATCGAATTTGTCCTTACAGCTTTTGTAAAAAGCTTGATTTC TTTTCGATTTTTTATGAAATTTACAGTCATTTTAAAGATTACGTTAGTTT GGTCAATTTTAGTAGCATTGAAAGACAATTTCTAAAAAATTCTTCAAGTC AACAAATTTGGCCAATCTTTTGGAACATGGCCAAATTTGGCAGCATATTT GCGCTTTTCATGTCTAAAGAGTTACCCCAAGTAATGTTATTATCTAAGTT ATGTTCTAAAGATTAGATTCCCCCTGCCAATATCAAGTATAGCCATCAAG GAGTGTGTGTTGATCTACGGAATCTTATCTTCATTTAATCTTTAGTATGC TAGTGGGGAAGATAACAAACATGGTCTTTTGTTGAATGTGGCTTGGCTTG TCAAAATTGTAGAACCAGCAGTTTATAAATGTAATATGAGTTCTTCTTAT AGCTTGAATAATGCAATTATTACCGATCTTCTTTCAATACAGGTTATTTC GTAGCACCACAGAAAGGAGAATACAAATTTTACAGTAGTTGTGGTGGTTC ATGTGAGGTCTTTCTTGGTTTGGATGGGACCGAGGGTGAAAACCATCGCA TCATCAACCAACAACGCTCAACGCGTAGAAACCAGTTTTTAAAGTAAGTC TGTATGTAAAGAAAATCCTTTCTCGTGTTTCTGGGCTGACAGTTTTTTTG TTTCTTTTTTTTGGAGGGGGAGACCTCTGAGGGTATAAAATAAGGCATAC TATACTTTTTTGTGTTGTAAAATGGTATCTNGGAAGGGGAAGACCTCTGA TGGTATAAAATAAGGCATACTATACTTTTCTGTGTTATAAAATGGTATCT GCAAAGATCACCACCGTGAGATTTGATAATCAAGATTCTCGATTAAAGTT TGGAGATTACTATATTCTATTGAAGTAAGAGAGTGTGGTATAGCAAAATC GAAAGTTCTTTGATCATATGGGCCGAGATATAGATGAAGGTACCTAATCT CATTTGCTACTAAAGAAAAGATGTCAAGCAAGGTTTTTGTTCAAATTTCA GGTATCCAGAGCAAGTTTCACATACAGTCACGCTCAAGAAGGGACAGATC ACTTATCTTGAAGCCATTAATAAACAAGGTACCGATAGTGATAGCCTCAG TGTGGGTGTTGAGCTACCAAATGGAGACAAATTGTTCCCAATTCCCCATG ATCTTTTACGGAAAAGTAAAAGTTCAGGTGAGAAATTAACTATTTCATTT TAAGTGAAAGAGCGAACGATGTTTTGGATCGCACAACCTAAAAAACTCAA ACAGCCAATGATAAGCGAACTTTCTAATAACAGAGAAGTTACATTTATAA ATAGATAGACGTAGCTGTAATACCATAGCAACGCTAGGGTGCAGGCGTAA AGGTTCCTTTAGGAATATTTGATCCAGTAGAGGGGCAACTATTTTTTGAA TTATCTCAACACGATATTGTAAGTTAAGAATGCTGAATTTCTCTCACTTT CAGCACAAACTTACGTATCAAAGAAATCAACATCCCTCCGGAGACGAAAT CTTAAGTCAGGAAGTGGGGCCATCCTTGATTTAGAAGGAAAACACTTCAA GAATAAGGATGCTTTAGAACCAGGAATAAACATTTTCCAAGATTCAAAGG ATGTTATGGATTCAGGCGATTTAGGTAGCGGTGATTCTGAGGATAAAATA AGCGCAGTCGATAAAAATGCATTGAAGACAAGTGATATAATATCAAACGA TGATATTGAAAGTATAAACTTAAGTGAAAATAAAAAACTTACAAATGACA AAAACAGCAAGACAGCTCACGAGAAAATGACTAAATCACCGGTTCAAGAG CTTACCGGAAGTGAACGTCAGGTAGTCGGCATAGGTGCTGATCCTTTAAC TCATGGCCATATGCTTGGACCCCAGGTCGGCCTCCCTTTGATTCATCCAC CGACGCGAGAAGACCACCATCCTGATGATATCACGTTAACCGGAGCTCAT CTCGGTAATCTACCAGCTCAGCCGTTACGGCATACCGGTAAAGTTGCTTT AGTCCCAGCTATTTTACATAAAACTGAATATTATGATCACGCAACGGGTT ATTCCAGACCCGGAGAAACTCGGATCGAGCCGGTCATGAATGCACATCCG GTGGAAAATTGGAATCACGATGTAAATGCTGCAGGGGATCTGGAGCACGC CCTTGGCGAAATGGGTGGTCCTGTTGGATGCGGGCAACCACCTTGCGGTG CTCCAATACATAATGAATGCGCTATGCCACCCTGTGGCGCCCCAATACAT AATGAATGTGCAACGCCACCCTGTGGCGCCCCAATACATAATGAATGCGC TATGCCACCCTGTGGCGCCCCAATACATAATGAATGTGCAACGCCACCCT GTGGCGCCCCAGCTGTGGTTCCTGTATGTCGGACTCCGCCCTGCAATTTA GACCACGTGGATGTACATCCATTTCACGAGTCAGCACCTCAACCTAAAAA GAAACCGGATATCGTGAAAGTAGAATTTGTTCCTGAAGAAGCGGAAGGCA TGAAAGCAGCAGGTTTGTAAACTGTCAAATATCATATGTGAAAACAGCCG AAAATAAAGTCATTTAGAAATCCAAAATTGACCTATAATCCTAGTTTTGT TTTTAAGTAAAAACAGCTCCTGAACTATATGAATATTGAAAGACAGTGAT CAATAGTAGGTTGTTACATAGCTCTCTTTTCTTTTTATTAACCGCCTTCA CTCTGGGTTTGACTAAATGTTTCTAATTTTGTTCAAATGAACTATGACAC CAAATTATAGGAAATACAAAAGTTGGGTCAAAGAAAGGAGGCTCAGTCAG AGTCCAGTTCATTCCCGGTGAAGTCAAACAACCTGCAAAGACTATGACAC CTGAAGCAAGAGCTGGTCCTGCTAGTTCAAATCAGGCGGTCACTCAACCG CCAAAGCAACAGCCGAAAGCGGCTTCAATATCGACCGGTGCAATCGCATC GAAATTGAAAGACAAAATGGAGGGCAAGGAAGAGGTATGTTACAAAATAT GAACTTCTAGAATCATATGAGATCAGGCGGATTCAGCTAAAACTTCGCCT AAGAATAATCCGAGCCTAATGTTTGAAAATTTTTCAGAAAATGTTGATTT TAAGCCACTTTAAGCCTTTCATAATAAAGGAACTAATTTTACTTAAAACA TTAGTTTTAATATGATATTTTTGGAAAAAGAACAACCGAGCTAAAGCAAA AATTTCTTTTTAAGGCGTGTATGCATGAATAACAACGTTTCCAGTCAGAG GGGTTTGAAATGAATTTACATCAGGAATTCTTTCATAGAGTACAGTCTCT CTAACTCGAATACGCACAGGGAATTAGACTAGTTCTATAAGGGTTTATTG TCCGAGTTAAGCAGGATATTCGAGTTATGGAGGTTCGAGTTGAGAAGACT CTACATTATTTTATTCCCTTCTCACAGGGAGTACAGTCTCTCTAACTCGA ATACGCACAGGGAATTAGACTAGTTCTATAAGGGTTTATTGTCCGAGTTA AGCAGGATATTCGAGTTATGGAGGTTCGAGTTGAGAAGACTCTACATTAT TTTATTCCCTTCTCACAGGGAGTACAGTCTCTCTAACTCGAATACGCACA GAGAATTAGAGTAGTTCTATAAGGGTTTATTGTCCGAGTTAAGCAGGATA TTCGAGTTATGGAGGTTCGAGTTGAGAAGACTCTACATTATTTTATTCCC TTCTCACAGGTGAAAGAACCTAAGAACGATCAACAACCACTGAAACAGCA GAAACAACCAGTACAACAGCAACGATATCAACAACCTCCACAACAATACA ATGCACCATCACCACAACCAGGTCAGTTTATTACAATATTTCAAGGGCGG CGCCCTCCTCTAACCTCCTTCTGATAGATAACTTTTAAAAGAGGAGCCTT CTGGTTTCTTCTGACTGCGGTCGTATATTCTCTTTTTACACATCTCATAT TAAACTATGTTCTACCCTAGTCGTATAAGGTCAAAAATCAAATAATCCTA ATCATTTTAATTCATCGGAATTCATTGCTTGTGGTTCTAATCAAAGTAAT CGAACCTTTATATTTCCTTGTTATTTTTATTTGAAATGCAAGGAGATGAT TATTTTTAGGTCATGTTTCTTTTTATACTTTTTGAAATTGTCTAGTACTA CTGAATTCTAATCTTGTAAGTTTTCAAAATTGCTGAGTCAGATAATGTAG AAACAAAATTCAGTTGCGTTTGCAACAGTTTGCCTTGAATATCTTTCTAA CCAAACTTCACAGAAATCCAAAACACGACTGGTCAGAAGCCAACAACAAT GAAATACTCATATCAGACACAGCCTGACAAATCATCATATTACAGACAGA GTAAGACGCATGCGCACGAAAACAACAACTAGTCTAGATTTTTAGTGGAA TATTAGATCTTAGATATTTAGATAGAAGTTGATTATCAATTAAAATTTAA TCCGGGAAAATGAACTTTTATTGCAAGAACTGCTTGCCAATGAAGCTGGA GCTGAACTTAAAGGTTTAACCAACTCCCATACCAGTACATTATCGGTTTT CCGATGTTTTCTGATGGCACCAAATATTACTATCTGACGTCCATCAGTGT CTTTTAAAAACACTGGAATACCATAGGGCGAACTTCACGGTTAACATTTA TTCACATCCTAGTTTCTCTTCTCTACTATAGAACACAAAGTTATCAAAAC AATAAACGGTTACGAAGCAGACCCACAACTCCCTTCAATGAACAAACCAA CCGCACCAGTGGCCAACAGCTTTGGTAATGGTGGAGGTCCTAGTGGTGAA GTACCAGCATCTGCTGGAATCACTAGAGAACCTGAGCAACCAAAACCGCA GATCTACCAAACACCCGCTGGACAACCGACCAGTGAATTAAGACCAGGAG AGGAAAAAATCGACCCACCTTTTACAGCACGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008621TCONS_00008621Clytia hemisphaericatranscript
TCONS_00008620TCONS_00008620Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008620-proteinTCONS_00008620-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:509602..515733 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.13 0.23 0.3 0.15 0 0 9.4 12.14 2.95 3.83 6.78 5.31 19.83 17.68 11.69 34.14 15.47 17.72 0 0.1 11.03 11.02 6.57 8.31 15.92 18.23 1.28 0.28 0.03 0.03