XLOC_004817 (gene) - C. hemisphaerica

Overview
NameXLOC_004817
Unique NameXLOC_004817
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000086:423544..427060-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004817 ID=XLOC_004817|Name=XLOC_004817|organism=Clytia hemisphaerica|type=gene|length=3517bp|location=Sequence derived from alignment at sc0000086:423544..427060- (Clytia hemisphaerica)
GTCATTTTGTAGACGTTTGCATTTAGCCTTTTTTCTAGATTAAAAGTCAA
GTATTTGAACAGAAGACCAGATAGACAAACATAAAGTATATCATTTTTAT
TATCTTTACAATACCAAACTAATAATCTTCATGAAAAATACCAATATACC
CTTGGAAAAGAAATCACTTTATAAGTTTTATTTGTGATCTTGAGCCACTG
ACTAAATCACAAAAAGTTAACTTTGAAGTATCAGTAATTTTCATTCTTTT
TGGTGAAATTTTTCTTTTTAAAAAGGTAAGGAGATTTTTAAATTTTCAAA
CAATTTCTCTTTTCAGGATATGTCAATCTCACAGTATTCCATGTTTTTGT
TAATTCAGCTTTCTCAAACAGGGTTGACGTCAGTGATAGACTTTGAAGAA
ATTTACAAAGTAAATTTTTTCTGAAATGAAATAAAAAACTCTCGTACACA
AAAGAGCGCAAAAGAAGGTCAAGATGGTAAGTATGGCGAATATAAATGAA
ATATCTTTTATCTCATCTATTCTAATGCCGATTGAAACTCTTACTTGCAA
TTTAGCCTCTAGCTTTTGTTAAGGATCCCCTACATAATGGCATAAAATGT
TAAACCAGATCGTCGAATGAGAACATTGATTGTCTCTGAATGAAATTTTT
TCTTCACAAAATTAAGCTTCAATATTCATATAAAATAAGGCTTTTTAAAC
TCTTCACCAATTTCTTCAAATGTTCAACATTCTCCAACATTTTCTTTATG
TTTCATCTTTTAAAATCTGTTAACAATTTTTTCAACATTATTCTTTCTTC
AAAAAGTAATAATTCTTTTTGTCTACCAAAATGCTTCGATTACTTTAGAA
AAGTAAGGTTACGTCGAAAAATCTGGCGGGAAAACGCATTTTTCAGTTAT
TCGAACTCCCGGTTATTCGAAGTAGATATGCTATGATTACCATGGTAGTT
ACCCCCCTTGGAGCTGCAAATAACCAGGAGTCTATTGTATTTACTAGTTG
TGATTTTATTGGCGCGGCCTTCATCCAAGATCATAGATGATTTCTAAGGT
CACTATTTTTCTCGCTGAACACGCGTTGAACAGCCTTTGTTGTCTTCAAA
TATTGTGATACTCATGGTGAAAATAGCAATGTTTAGGCATTGAAATAAAT
TTATTTGTCCCACACATTTAGGGTGGAATCTCAAGACTTATCATCATGAA
TTTAATCCTTTTGTTTTGTGTTGTCCTGTTCACATCACAAGATTGCATCA
AAGCTGCAGGTCTACCTGGTAAACAATGTGAGCATATTCAGGAAGCAGGA
CAAGAGCTGGCAGAAAATATCAACCAGTTTGATAAACTGTTACAAGATGT
TGTGATGCGGTGTTATGAAGAAGCACAATTGATCATCGAATCTTCATTGA
GATTCCTCAAAAATCACATGGGAGGAATGAGACTATCTAAAACTGCAGGA
ACAGGTAATGATGGTCTTGCTTTAAATCCAGCAGTACGTCCAGGGGAAAC
AATCGGAGGTTACGGTGTATGCCGCTTTCAAGGATTCTTTTTTTGACCTT
TAAAGTTCCGCTAAGCATCGTAATAACCATAATAACTATGATTCCAGGCT
CCGTCTAAGGGTCATCAAAAGCAGAAAAAAATCCCGGTTTTACTCTGACA
AGACTATATTGTGGGAAAAAGTGCCGATCTTCCCAAATTTTGGGCTTTTT
TCCTTGATTTTTAACCAAGGAATTTCCGAATTTAAAAATTAAGATTTTAA
CGTATTTGTTTTCTGTTTAGCGCCGATCGAATCAACCTCAAAAATGGCAG
CCATCGGTAAATCAATGGGTATTGCATTGAGATTGACATTTTCACAAGGT
CATACGAAGTTCTTTGATTTGGTAAAGAAAGCAGGAGATATGGTTGTCGA
AGATTCGATTGTCACTGATGTATTGATCCAATATAATCAAAGTAGGTTAT
TCATGTTTTAACTTTTGATCCTTGAAAGAAGCCTTTATACAGAGTTTATG
AAAACAAACCACGTAAGGGTTAAAACGTTTCTGAGCTTCGTTGCAAGTTT
TGATTACAGCTTTACCTTTATCGGCAGAGTACGGTGGAAGGTGGAAGAGT
TTTATTGCAAAACACTCATTTTTCAGATACGAAGAGAAGTGTACCACACA
TTACACTTGGAACACTAAACAACATCGATGACAAAATCTCCACACTTCGA
CAAGACATGAACACATCACTGATCAGCGTTGAGAAGAATCTCCACAATGT
TGCTAAATTGTTATTCACAATGCTGACTGATAGCTTGAAAGATCTTGTCA
CCGATCAAAATTTTAAAACTCGTAAGAATAGACAATTTTATAAATTACGT
CACCAGCAAACACTTACATCATTTTCCAATAAATAATTCTATGGTAATCA
ATTTCCGAGGAGTTCATAAGAAGTTTACTCTATTTGTAATAGTATATAAA
TATCCTTGGTAAAGGCTTCAAAGCGAGGCAGTCACTGTAGTCAAAAAAAT
TAATGAAAATATATTTTCAACAAATTTATCGAGGAAAACCTTCATAAAAT
GATAGAATATATTCCAATGATCAGCTAAGTGTTTAAGTTCGAGTTCGAGT
TGGAATTAGCGAGAGTCAACTGTATTTAAGTTTCGCTGATGAATGACTTT
TTCATTCTTTCAGATCTGGACAACATCCGTGGAAGCATATCATCGTATTT
GATATCTGCTGTTCATTCGGTGATCGATTCACACCATGAGAGGTTCTTCT
TACTGGTGAAACATTCCGCACAATTGATTGAAATGATCGATAGCATTGTT
GCCCCTATGAAAAATGGTACGGCATTGGACTCGAATCTCCTCTTAAACGC
GTTACTTAAGTTTAACAGAATCAGTGCCTTGATAGAGTCACGGTTGTGGC
ATAATTTTGCACCTGTTTTAAAAGGGTTTAAGGTCTTTCCTGGAAAAGAT
TGAAGATTCCATTCTAACCCTCTTCTCTAAAATTAGGTCCCTGTTCCTTT
CAGGTAAAGAGCAAAATGTTCCAGAATAATCAGTGAAATGGAAAGGCTTA
AAGCATAAGGCTTAAAGCATAAGGCATTGAGTAGGTGATTAGGGTCTTAG
ATTGACTTCGATTAAAGGACCATTTAATTATCGACATGAGAAGATTATAT
CCATTATCTAACTTGTTCGTTTCTTTAGATCCAAAGAAGTTATCAGAAGC
ACTGAGCCCTGCAAAAGAATTGATCGATGAAGCGATCTCTGATTTGAAGA
AATCAATTGGATTGAATGAAATGAATCGACAGTTGAAAATGAAGTTAACC
TGGATACAAAAAATTTACGGGGACCTCAAAACATCTCTTCAAGGGTAGAC
TTTCACTATCTTTATTGTATTGAGCGGGTTTTAGAATAAATCTGAGGAAA
TAACAATTTGAAAATACAAATGTATCGATATTATAGTAGCTTTTATTGGA
CCTGATCCCATTAGAAAAAACTGCGAATCTTGTTTGTGTGACAAATAATC
TGTATGGTGACAAATCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008610TCONS_00008610Clytia hemisphaericatranscript
TCONS_00008609TCONS_00008609Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008609-proteinTCONS_00008609-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:423544..427060 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.29	2.66	3.01	3.31	0.67	0.21	0.64	0.36	0.03	0.1	0.88	0.2	26.91	22.64	37.35	75.9	7.37	7.72	109.99	116.52	24.7	22.73	53.22	55.31	97.19	115.55	1	0.88	30.65	38.13