XLOC_004782 (gene) - C. hemisphaerica

Overview
NameXLOC_004782
Unique NameXLOC_004782
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000086:383320..391403+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004782 ID=XLOC_004782|Name=XLOC_004782|organism=Clytia hemisphaerica|type=gene|length=8084bp|location=Sequence derived from alignment at sc0000086:383320..391403+ (Clytia hemisphaerica)
gaataatctggcccagaaaaaaatattttcaattatttgaTACAATCGAA GGTAATTGAAAAGTAatcgaaatgattgaacaaatcgaaaatggttgaag aaaatgccataatctgGAGTTGAGTGAGTATTCAATCACCGATAAAATTG ATAGGTTGTCATTGACCACCTTCGATTATTATCAACCATTATCGATTACT TCAATCACAATCGAACATTCTATTGGTACAGTCCAGTCAGGACTTCcctt cactttatcgatattacgcactTGGCAGTGTGTGCTATAATAttttgctt tcgatttcaagcaaaggtcttagcaacaggatGCACGTTCATAACAacag ggctgggtagaaaaatctaaacatagaatttaaaaaaaataccgatcatt gTATAGAGCACCAGGGGGGGGGTACagccgcagggtactaacccatagcc gggtggtggtgtctaatttggaaattcaaaaaagttagtacccggtacta atttTGGGGTGGCGGTGGGTATATCTCCAATTttaagttagtacccggta ccaATTTTAGGGTGGGGTGggtatcatttcaatttttcttcaagtactCA GGCCCTGAATATGGtacatttgtttaatttttggaccgaccccggtgggg tagaggtcctataaattaaccgatgtccgtccgtccgtccgtccgttcgt tcgtccgtccgtccgtccgttcgttcgtccgtccgtctgttaccagcttt tctcaggattggctcattagttttttctgatttttggcacaaNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNAtttatttccggccgaaaatgccggaaa tatgccggaaaaaacggttttttggcattttctcaagatttcatcattag tttttttctgaatttttgcacaaagatgtgtattagaaatgcccaaaact tggccgagtccgatttttgagaaaaatttttttccggtcgaaaatgccgg aaatatgccggaaatcgccatttttgcagattttcatcggNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNggccgaaaatgccggaaatatgccggaaaaaca gtttttttggcattttctcgagattttatcaatagttttttctgattttt tgctcaaagatgcttaataacaatgcccaaaacatggccgagtccgattt ttgggaaaacattttttccggccgaaaataccggaaatatgccggaaaaa ctgttttttggcattttctcgagattttatcattagtttttgctgatttt ttgctcaaagatgcgtatcaACAATGCCCAAATTattgccgagtccgatt tttgagaaaaagatttttccggccgaaaatgccggaaatcgccgtttttg cagatttgaattgggctttttccatacatttctttgttttttcacttaaa aaagttattgataacaatgccaccatcaagcatgattcaattgtcaataa aacttttgcaattttgcaaccggaactttctatttcttttttccctaaac ccctccccccctattaacaatcaatgatgacatttaatgcattttcgcta agcgctttattttcttaatgattgtttttctccttattgctatctaagtt tcatcgtcaggtaggtccattcagcatgttgcttgtttgtcTTCAAATTT CAGGATTTTGATGAGGAAAGATTTCCTTGTTATGGCTTACAGTATCTGAC AGTATTGAAAAGTTCCCCCTTCCAATTGAAGGTACTTTCCCTGCTTATCA AGTATGTAGGGAAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNttctcgtgcaatactcaatatttta ctcgttccgagattttaccgattacggaaaaatctcggaactcgtaaaat atttctcgtattgcactcgaagtcatgcgataactagtacatattATACC CTATAGCTTATTTGGGTTTATATTTTGTTTGTCTGATTGTTTGTCTGTTT ATGACAATTAAGACGGAGGCAGGTCAACTAAGCAAAGCCAACCAGAACCA ACAATGCAACTATTTTCTATTTCAACTTCTTTCATAAGATTGACgcagtt ttgaataatttgaataaattaccaatctattgaagaaaaaataaggaaat tcaTCCAATCTAAGCTTTCTTactattcttaaatttttatcaACTTGATT TTTACTTCTTCTGATAGATATATACTTTTATTGCCGTTATTAcagctata taatattttacttttgccaaGGAATTTCCTTGTTTTACCTTTGTAATCAA AAGTTGTGTTCgatttaaagaacttttaagAGGATCTGAGTTAAAAACAT AGTATATACAAGTCATAATAACAACAAAGAGCTGCTTTTGCTGGCTTTTG AAAGATTGGGACCATGCTTGGTAATTTTTAAGGGTGGTGTCTCCTATTTT CCTTGGTAATTTTAAAGCcggtacccggtactaaaaagggggtgggggtc cctttttctttaaaaaaaagtaagtacccggtactaaaagggggggtggg ggtccctgtttccttaagaaaaagtaagtacccggtactaaaaagggggt ggtggtacctaagacaatttttcttaaaaatcaggttagtaccctatggg tcagtaccctgcggctgtacccccccccctgagagcactaaaaaataccc cctttctatgtttagtttgttctaccttggattataaatgaaaatatctt caaaaaatctttgtcCGCCATCAGCTCCCACAGTAATCTTTGtgcgcttc aattcttagataacaaataagagaggtgcgcttagctaaccGTGCTCGCA GACAATAAATTCATGTTTActtattttgtatattttagttgtatttatcc aatgaaaaggatgttgataAAATATGCACAGCGCTGACAAAATGTACACG GCAtagattatgacatcattaaatttGTCAATATCGATTCAACACTCGTT AACCCTATTAATTATTATCAgcctttttcggattttgtattctcaagggg aggggtgttttccaccagccttgcataacttttgatctagaaaagctATG GACTTAAAacttggcagaaatgttctctaccatataAGGAATTCATAGAG AAAaggggttgatgacgtcatcattaagGTAAATTTTGAGTTAAATTATC TTTTagaattattattttaatttaatCCTATAGCTATAAAGATTATGGCT TGATACTCCATACAGAATGCCTTATTCTAGCCTTGCCAAGTTTTGGACGG AAGATTTGATATCACTTGAAAAGCGAGTTCAAAACTGTGAGGACAATACT TCAATCAAACTAAATGATATTGACACTGTAAAAAATGCATATCTAACCAT CAACAATtcaattaaagaaaaaattgatgatgatgatgatgatgatgacg atgattcttcgctttctgatatgGAAAGGAGCGATGTGAGTGACAGTGAT ACAAGTGACAGTGAAGCAGAAGTAGAAGATGAAAGTGGAGAAGAACAAGC CGTGAATATAAATAAATCTGATGATACAAGTGATGACGACTGCAACTTTC AATTATGTGAAAAAAGTGATACAACGAACATGTCTGACCTGAATAAATCA ATTTCTTCAGTGGAGTGTTTTGATTCAGATGCTGAGCCTGATGTTTTGCA AGATTTTGTGAGTTGCAATGAAAAAAGAACATATACTGGTAGCCTCTCAT CTACTGATGATGAAAATATGGATAGTTTATATGACGATTTTACTTaaaaa atttcccaattttTGAATTATATTTATTCTCTTTAAATCAAATTGGTATT CAGAAATCTCAGGCAATTTTGCAAGATttgattttgtgaaatttgaaaTT GCGTCTCATGAAAATTAAATCAAGTTtaggtaattttttttgttttttta attttttattaattaAGCTTTCGATCATGTTCAGTCATAGAAATTCCAAA TTATATataagataatttgtttttagtGTGTTTTATTCAAAGCTATGTAC AgatcattaatttttatttttattctctGTTAAATCGTCTTACTTAATTT ATTAAACTTTAACTCTctggggggggcactcatatgatcttgCCTACGTC GTGTgtcgcgcttaagggtggggtttttcagcatcccaaaatgcactgta aggactgcaagggtcgaattttaaaacgaATTCAAagtaattattaaaaa gaaaggtttttacttctcgtttgtttgaaaaagtttctattaattgtctg ataattacagctgacaagaataattttctcattttttcNcgagtgccccc cccccccgagctTTAAATTAACCTTGattcaatttgaaaataccTTACAA TGGAAAACGAGTTTTTTAAAGCTCAAAAGTTAGCCTTGTGATCTAAAAAA TGTATTAGGAATGTCCAggctttgagctaagttaaGCTTCTTATacaaag aaaacgtgtataacataataaaaacccattttccttcaaaaatacaggaa ctgGATTTTCTctaaacacaaaagaaaaatttccttttaaCATACGGatg aatagaaatattttgggaaattgCCTCTGAACAGGACAAATAGTAAATCA CTAAGGGTTAGTGACTCTTACTTAtacaaggtttatttttctaaacGTAG CAGCCAAGAAAATCTAGCAATGGACGAGGttcaaataacaaaaacaaaag gaGCATTTTTAATGGAAAATCTTTATGGAGCTGTCGTTGATCACAATAAT AAAACCACTAGCACAGATATTAATGTTACTTCCAACGATGATAGTAGCAG TCATGATCAGGGTGGAGAAATAATCGATGTTATCAGTGAAACTGAATCTA ATTGTACTGAAGAACATTCATTGAATGAAACAGACAAGAAATTAGCTGAC TCTTTATTAACAAATGAATTAGACTTATCAACGCTGTCATCTGATGAAGA ACAAGAAATATATTTCGAAGTTGTAATGAGagcaacaaaatacaaaatca aagCTCAAAATGATATTCTTGAGCTTCAACCAGACATTGATACAGTGAAC GAAAGCGAGCCTGATATTTTGCACGACTTTTGGACTGGTGATGAAAATAG ATTACATCCTGGTCACTTTTCTTCCACTAGTGATGATGAAAACATGGATA GTATATTTGACgattatttttagatttttctaaattcGTTTTCTGGTAAA GTAATTGTTTGATAATTGACTGGGGAAAGCATAACTAATTAATACAAGCA AGTTTGCTCTTTAAAATAGTCTTTTAATTTCAAGCttgatattttgtttg tttgtttatcataTGTTTCCATTTTGTTAAAATTAGCTCAATATTTTGAT AGAAGGGATGAACTTAAAAGGGATAATCAACTATTCTTAGATAATGTTAG AATGGCTCATTTTTAGCAGAAAATTCGCTAACCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008547TCONS_00008547Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008547-proteinTCONS_00008547-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:383320..391403 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.65 9.53 3.22 1.31 9.15 4.85 9.14 8.4 4.37 3.89 2.58 4.08 1.99 1.05 3.11 2.34 2.44 3.55 1.38 1.06 4.81 3.36 20.97 22.53 5.19 6.14 4.36 0.86 8.48 9.26