XLOC_004726 (gene) - C. hemisphaerica

Overview
NameXLOC_004726
Unique NameXLOC_004726
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000085:84721..89171-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004726 ID=XLOC_004726|Name=XLOC_004726|organism=Clytia hemisphaerica|type=gene|length=4451bp|location=Sequence derived from alignment at sc0000085:84721..89171- (Clytia hemisphaerica)
CAAAATTGGATGATCAGAAGATGAGTGGGGAAAATGTTTTGGAACATGAA
CAGAAAATGTTGCATTTGGAAGTCCTCAAAACGCTCAAGTAAGTCAAGNA
AAATTGGATAATCAGAAGATGAGTGGGGAAAATGTTTTGGAACATGAACA
GAAAATGTTGCATTTGGAAGTCCTCAAAACGCTCAAGTAAGTCAAGTCCT
TCCTTGAATGTCAAACAATGTTCATTTAACGTTCTCAACACGTCCATAAA
ACGTTGGATGAAAGATAAAACAAGGTTGTGTGTAAGCTCGATTTATGTGA
ATAGGGGAAGAAGGAAGCTTTGTTTTTCGTAGATTCGTCAGATTCTTCAA
TGATTTTTATTTATACACTTAAAGTTGAGCAGGTGTCAGAGGCTATTGTT
TGACATGAAACGAGAATATACTAAGCACTACACTGCAAAATAGCGCATGC
ACAGCACATGCGTCAGTTAATGCACAGTGAGTAAAATGAAATATTTTAAG
TGTACAAACTTTCGTGAGTAGAAACTTTCGCGATTTTCGTGAATTTTGGC
CTTTTTCGCGAAAGTAAATTCGTTTGAAAATTCTTAACAAGGTGATTCGC
GAAAGTTTTTGCTCGCGAAAAATTTTTAAAAAGTTGAAAATCTATGGAGC
TTCGACATCCTGCTAAAAAAAATTAATTGTAACATTTTTATGCCTTAAGA
GCGTTATTGATGTCATAGAATACCAGTTTGAATCAGATTTAATAAGTATT
TGTCACTTTCAAGCCTTTTTTTGGATTAAAATTTTCATTTTGATTACCCA
ATTCGCGAAAATAAATGTCGTACATTTCGCGAATTTTCGACCCCGCGAAA
GTCTGTACGCCTAAAGTATTCTTGGGGTTTATTTTTATCTTTACTTTTAA
AGAGATAAATTTGTTTATACTTTCCTCTCCATCTTCATCAGGCCGAAATT
ATCACAACTTGAAACATTGAAAGCGAAGATTTTATGTGAAGTTGAACGTT
GCTTGAAAGAAATCTCTACCAGTGAAGAATGTGAGAGAGAAATTCATATT
TTGGAAATGGAGAAAAGATTACATGAAGAAGCTATCAAAAATCTCGATAA
AGATATTAACGAGGTATGCAAAATGAGGCTTACTCTTGTCTTCCGAATAG
ACGCCCCCCCCCGCTAATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGA
CGCCTCACCTGACGGAAACTTACAGCTTGACTGCTCACTTATTAAGGCCG
CTACCCACTCAGTATTTTATGGTCGGCGAACAAGGCGTACAGCTCGGGCG
CTTTGGTCGCAGAACGCTTTTCCCATTCCACTGATCAATAGTCGAACGTG
CGCAACGCACTGGGCTCAACTTCAGTGGCTTCAAATTATTCATAGGCCCA
ATTGTAGACCCCCAGATATTTACGCAATGAACAAGTGTGTCAAATTTCAA
CCAAATCCGACCATTTTGGAGGCCTGTAGGCTGCTTCAAAGCTTTAGCCT
CGTTTTGGCAAAAAAATCGTCCCTAGGCCCCAAAAATCTAAATTTTTGAA
AAATGCAAAAAATACCCCCAGATATTCACCCAAGGAACAAGTGTGCAAAA
TTTTAGCCAAATCAAACAATTTTTGAAGTCTCCAGGCTGCCCCAGAGTTT
TAGCCTCGTTTTGGCGAAAAACTCGTCCCCAGGCCCCAAAAATCAAAATT
TTCAAAACATGAAAAAAAACACCACCAGATATTCACCCAAGGAACAAGTG
TGCAAAATTTTAGCCAAATCAAACAATTTTTGAAGTCTCCAGGCTGCCCC
AGAGTTTTAGCCTCGTTTTGGCGAAAAACTCGTCCCCAGGCCCCAAAAAT
CAAAATTTTCAAAAAACGAAAAAAAACACCACCAGATATTCACCCAAGGA
ACAAGTGTGCAAAATTTCAGCCAGATCGAACAATTTTTGAAGTCTTCAGG
CTGCCCCAAAATATTAGCCTCGTTTTGGCGAAAAACTCGTCCCCAGGCCC
TAAAAATCAAAATTTTTGAAAAATGAAAAAAACTCCCCCAGATATTTACC
CAAGGAACAAGTGTGCAAAATTTCAGCCAAATCGAACAATTTTTAAAGTC
TCCAAGCTGCCCCAAAGTTTTAGCCTCGTTTTGGCGAAAAACTCGTCCCC
CGGCCCTCAAAATCAAAATTTTTGAAAAATGAAAAAAACCCCCCCAGATA
TTCACCCAAGGAACAAGGGTGCAAAATTTCAGCCAGATCGAACAATTTTT
GAAGTCTTCAGGCTGCCCCAAAATATTAACCTCGTTTTGGCGAAAAACTC
GTCCCCCGGCCCTCAAAATCAAAATTTTTGAAAAATGAAAAAAACCCCCC
CAGATATTCACCCAAGGAACAAGGGTGCAAAATTTCAGCCAGATCGAACA
ATTTTTGAAGTCTTCAGGCTGCCCCAAAATATTAACCTCGTTTTGGCGAA
AAACTCGTCCCCCGGCCCTCAAAATCAAAATTTTTGAAAAATGAAAAAAA
CCCCCCCAGATATTCACCCAAGGAACAAGGGTGCAAAATTTCAGCCAGAT
CGAACAATTTTTGAAGTCTTCAGGCTGCCCCAAAATATTAACCTCGTTTT
GGCGAAAAACTCGTCCCCCGGCCCTCAAAATCAAAATTTTTGAAAAATGA
AAAAAACCCCCCCAGATATTCACCCAAGGAACAAGGGTGCAAAATTTCAG
CCAGATCGAACAATTTTTGAAGTCTTCAGGCTGCCCCAAAATATTAACCT
CGTTTTGGCGAAAAACTCGTCCCCCGGCCCTCAAAATCAAAATTTTTGAA
AAATGAAAAAAACTCCCCCAGATATTTACCCAAGGAATAAGTGTGCAAAA
TTTCAGCCAAATCGAACAGTTTTTGAAGTCTCCAGGCTGCCCCAAAGTTT
TGGGACATACACACACACAGACAGACACACACACACACATTGTCAGATTC
TAACTCAACTGAAGTTGAGAAAAATAAAGGGGAGATATGCTGCATTTTCT
TTTTTCTATTGTTGATATCTTTTTGCACACGGTACAAGAGAGTTAAATGT
CTCTTCTGATCGGCTATTTAAAAAAGAACAATAGGGAAGCCGCACAGCCT
AGCGAAAAAAGTTGAAAAGTTTCAACTCTTGTTGCACTCAAGGCGACAGC
CTTGGAAGGCTTGATTTATGTAATTTATGCAATAGTTAAGCCGCGCGCCT
TGTTCGACGACCATAAAATGCTGAGTGGGTAGCGACCTTTAGAATTCTAT
TCGGGAGACAAGAGTAAGTATGGCGTTCTAAATCTGATTGACACGACTTC
GTAATTTCTCACTTTAAAACCTGAAAACCTTTGGTATATATTAGTATTTC
AATAATTGTACTCGATTTTGTGAGCTGAAGGGTATGTGACGCCCGACCTC
CATTTGCCTAAGTATCCTCCCGGGCAATTATATTTCCAGATTTATCTCTC
TTCTTACACCAGGGCTATATTTTCTTCTAGAAATAAAAATTGACAAGCTT
TTTGGCCAGTTCTTATAAAAGTTTAATAGTTTCTCATTTTCGATCTGCCT
CCTCATTTTCAGTTGAAAACATCGGTGTCACAATCAAAAGTGGAACAAGA
TATCCTGAAATCGCATGCAAAACAACTCGTTGATGAATTCAATCCACTGA
AACGAGAAGTGAATGAGATTCGTACATCCATTGGACTTGATACCTTGCCC
GACCTAACGGAAGTTGACGTCATACTGAAAAAGAAGAAATGATTTTGATG
TCGGTATCATTGTTGGGTTTCACGGAGAACTATATTCTTACGGAGAATGG
TAGAGAAGAAACATTGGAAACACTTAAGAAAAAAGACGATGAAAGTCACA
ACCGGCGTCACTTTGGCTTGGCTTTCTACAATGCAATAATGATGGACCTC
GGAAAGTCTGCTAAGTAAAAAACAATTGATAAAATTCTTTCATTCATGGG
AAAAGATCAAGGTAATAACAGTCTTCTTTACTTGACTATATGATAAAGAA
CATTTGATATTTTCGTTGGAAAGTTGTATACATATTGAAGAAGGAAACAT
G
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008439TCONS_00008439Clytia hemisphaericatranscript
TCONS_00008438TCONS_00008438Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008439-proteinTCONS_00008439-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000085supercontigsc0000085:84721..89171 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
41	40.57	19.27	13.92	2.27	1	6.03	5.75	5.52	5.53	4.15	4.05	2.66	2.74	4.95	4.12	7.1	7.06	1.49	2.44	4.76	3.26	23.32	21.05	4.35	4.9	2.2	2.27	8.29	7.96