XLOC_004710 (gene) - C. hemisphaerica

Overview
NameXLOC_004710
Unique NameXLOC_004710
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000085:149085..152425+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004710 ID=XLOC_004710|Name=XLOC_004710|organism=Clytia hemisphaerica|type=gene|length=3341bp|location=Sequence derived from alignment at sc0000085:149085..152425+ (Clytia hemisphaerica)
TTTTAATATAAGGTAGAATTTGAACTAAACATGGATTTTTTAGtgctgaa
tattttttttgaattctttgtttagatttttctacccagccctgtTTTTA
AGTATCCACGTCCTGCTGCTAAGAGCTTTGCTTGAAATTAGAAAGTGACA
CCTAATTATTTAGGACAGGACTTCCATGCGACATTTTGTCCAGTAtaatt
taataatatttttcagcACTGGACAAAAACACTAGAAAGTTTGGTGTGTC
AACAGGGTCGTCTGAAGACGTCTTAAAGAGAGTACAGAACCTAGACTGGT
ACAATCACCCCTTTCTTCTGCAATCTACAACAGTCTACTCAGAATTTCTA
ATGTTTTGACAATAGGATGCTAGCATTTGCAGCTCCTTTACATTGGTTGG
AGTAGCATGttattgtaactttttttttcagggtGTATTTTAGAACATAT
AGTAGACAGAACTTTTTACAAATCTTAAAAATGTTTACTAGTTTTCAAGT
TTAGAAGTATTTAAGAAaacaattatttatttttaatatacCAGTTTGGT
CTCTCAATATTTATATAGCTGTTATCTCAACAAAATGGTGGCCAAAACCC
AGCAAACAGTTTCCAGGAAGACTCGAGGTAAACCAAAATCTGGACGGGTT
TGGAAATCTCAAGGGCAAAAGAAATCCACTATGATCAACGTCAAATCTTT
ACATCCGTCATGGAGCAAAAGATCTAAAGAGCGTGCAGAACGAGAATCTG
TAAAGAAATATCAAAAGGAACTGAAACTTTCTTGCCATTGCAGTggagaa
agaagaaaaacggATAAGGATTGAAGAGAATCGAAGACGTAGAGAAGAAA
ATGCTAAGAAAGctgaaattgttcaaaaaattactgattcatcaaaaatt
aaacgaatgaaaaagaaacaattGCGACTAATTGAAAAGCGCTAATGCTC
ATTCCCCTAGAAGATTATTTGACAAAAAAGTGTACAAAGACATGGTTCAC
TAAATAGAAAGATGGAAGTGGAAACACAGAAGTTATAAAGATGCGTTTGT
TGACGAAATGGAAAGGGTGTGGAACTAGGAACGAAAGAAACCTCAATTCA
CAAAACGGAACTAGTCTTTATTATTTACGAGAGTTGACCCAGGTCGCCTT
TAATTATGAACTTTACCAACAAATCAGAGTGATGTTAATTTTCGAATATC
ATGTCACATTCCTTTGACCCGCATTCAGAAATACCATGACCATTTTTGTG
CAACAGTGCAACAGTCTACTTCTGTTtgcaaaagaaataattttttgaaa
aatcttttaactAAACCATTAAGTGATTTATTACTGGTAGTTTGGTACTG
ACTTCTTTTCatactttttgaatttaaattgtCAAGGCAGGTTGCTACTT
ATTGTTCTAACCTATACCATTCTTTTTCTGTctgttttataaaataaaat
aagatgCTTCAAACTTGAATCTAATACGATCTTTAATATTAGTTATTTTT
GAATGGTTTTAGATTTTAAGGattcatttttgtaaaatcagctTTATAAA
TTTGTTTCATATTATTGAAGTGAAATATCAGACATAAATGTTGAAGTAAA
GAGTTTTTCTTCGTTTTGATTACATGATTGAGCAACATttaatttttgtc
catttttcttctttctttcaatagataaataatataaaatgacATCCTCA
GTGACGCAGCTTACAAGATCAATATTCAGAAAAAGTGGTAAAATTTTATC
AAGGCACACAACTTCAAAACGCTTGTTCCATTCCACTCTGCCAGTTCTCT
CAGATCGCATCGAGAAACATACAGTACAAGATGCATCTACCTTCTTGAAT
AACATGCTACTCCAATGTAAAGGAGCTGCCATATTTGCCGGGACTGGTCA
ATATCACGAAGAGAAAAACCAAGATCGTTTAGTGATGTTGAATTTCGTGG
ATGATTTTCTTCAAGATTcatcaatcaatgtttttgacAGCCaagaactt
ttggattgttgtTTAAGAGATTCTGATGTTGATTTATTGATCAATAGTTT
GAAAGCTCACTCCAAATTTCCGGTGTATAATGGTGAATTGGATATAGTGG
ATACTTCTTCCTGGCAGCATGGCTTCACATTGAAACCGTTCAGTATATTT
ACACCAGTGGAACGCATTCTCTTATTCAACGATGGGAAACTGTATGTTAA
TACCTTAGGAGATGTGCAAACTGTTCCCATTGAGGATATAGAGTATGTCG
GGCTCTGGGTTTCAGACGAACCATATAATGAACGTCGCTTACTTCTTGGC
TTGAaaggacttcaaacaaaaatgttGTTGAGTTTGGAACGTGATTTAGT
ACACTGCGACATGGCCAAATTGACTCTGGATACTGAGTGGATGATGAAAG
CTGCTGCATTGTTGTGTGTTCACATCAGTCAAGCTGGAAATTCGAACATC
TACCTCAAAGTGTCGCCATGCTTACAACCTATCAACAATGAATGGGTTGC
TATGCGACAGAAGATTTGGATGGAGATGATTCAAAAGAACACTTGGGGTG
ATAAGAAGAACGACGACGACGATTAAAAATGaattctttgtttcttttac
CGTTCgtcttttctgttttgtttcaTTATGTTCGTTCGTTGCAATGCCCT
TTGgtaaaattgtattttctttcttttggtgttttggtgtttctaCTTTA
ACGTGTTTCGAGTCTTTTTTTTATACAAGAACActaaatttgaacttttt
acGACAACATGAAGTCTttattgaagcgtttgggtgagacaaatttaatt
tatcgTTCTTACTCAGAAAAATATGGATCAGTTGGTCGGTATTATAATAA
ATTGCTTAAAATGTAAAGTCGGAAGGTCAAGATCTAAACATCTGTGACGT
TTCGACTTTTCCTTTTTATCAATGAGCGGCGTTGTAGCTATTTCCATTTT
GATATTCTAAATTTATCTAAGTTCTGAGAtgaatacacattttttttcaa
cttgttcAATCAAAAATATCTGCAAAATTCCTTCCTTGGAAATTCAATAc
tattattttttcgaaaattggatcGGTCTAgcccgtagaacaataaattt
ggtctcgccttatttttgcttttgaatCTAGAGGTTCATCTGGGTCTTTA
GTGGTTTGGCTTGTCAAAACAcaacaattcaattttttaaatgttttgag
tTACAGTagaatttattttaatttgaaatattgttaCAGCAATTTGTATT
TAgtcgattttgaaatttttatgtttatagtttggtattttaatttaaat
ttaagttttctttgTTCCTCTTCTTATCCTTTTGTCCTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008389TCONS_00008389Clytia hemisphaericatranscript
TCONS_00008390TCONS_00008390Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008390-proteinTCONS_00008390-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000085supercontigsc0000085:149085..152425 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.03	19.93	26.06	26.15	26.01	20.85	27.42	28.91	22.65	20.22	19.87	17.97	15.51	14.96	16.58	18.93	25.79	25.34	8.54	9.65	22.28	21.24	21.82	24.61	27.26	26.09	11.39	9.01	13.72	11.2