XLOC_004653 (gene) - C. hemisphaerica

Overview
NameXLOC_004653
Unique NameXLOC_004653
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000084:326047..332602+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004653 ID=XLOC_004653|Name=XLOC_004653|organism=Clytia hemisphaerica|type=gene|length=6556bp|location=Sequence derived from alignment at sc0000084:326047..332602+ (Clytia hemisphaerica)
GTGGTGTTATAGTGCTGGATTATTGATCGGATTGTGAGCGAAGAAAAGTC CTTTTATTGTAAGATCAAAACCTGTaagtttatttttgaatttatgtCTT GTTTCTGTATtgacttttattacttttaccCTCCTGAAANCGACCTTCCT TTTCTTTTACCTTGGAGTAAAGTcctatgaaattaaaaaaagagcAGGAA TCTTTAAATACACAAATCAGGGATATCAGGAGTCTTAaacgttttatttt tacagaagtgttcccgtttcatatcagacacatatttcatatcaggacag tgtctgcctattattataatatgcttatataagcataaaaaatgcttttc ttgctccacattcgtgtcaattcgatgtgaaaaagcttgcaaattaaaat tgacgagtaagcaaacgatatcactcttatttaaaaactaaaCCTTTAAT AATCGAAGTAAAACTATAGAAactaacacgttttttttttaaggaaacac GCCTGAACTGACAtcacttttttctcttttgttttctGCATTTTTGCTCC atcttgtttttgttgaatatttttagAATAATACTTATTAGCGCATTTTA TCATTAATCTTatttttatggaaaatatttgattttgttttttcaaaaaa taaaacggATAAAACggagtcttctttttttttcgtacAGAACCTACCTA TTTATTGAgcctcgtccaatatcttttctcgcacTCCCAATATTTTTGTA ACAACGACTGAACGATTGATTcttttttttggcttttctgAAATAATTAC TTCCTTAATCCACTATCGAGTTTCACCCCTGGTTTCAAATCTCTAAAAAG AATACATAAGGCATGGGAAAAGGTTGCGTGTTctaatgttttattttcag ttgaCTCTCGGGGTTAACTCGAACTCGAGCGGGGAATCTCATTTGTTCGA ATTCCAGAGTAAAAactgaaagtattttaagagggtttcttaTCTTCTTG ACGGGGAttggaaacaagttcgaattcgaaaagaaaaaagatttgaatac acgctttttttcttataagaatacactttataagaatgtccatgatgaaa atggccaaaaaattaagaatataatAAGAATATCagcatcatggaattta gcaactaagaatgacatttttaatgcattttaaaccgtagattgccaatt tcgatcttaacctaagaataccgtaagaatatttttggatgattttcgcc aaaaagttaagaatatccagaTCGGATccagaatatccatgatgaaatgg aaaaacaccattcttataaaaaaaaaaaacatgtaagtgAGAGTTTACTT AAATAGTCCTCCAACAACCTTGGCAGATTCTATTGGGTTAGCCATGGCCA TTGAGCTTAAAGCCCCCGAAGGGgctaaaaagtatttttttattttcaac ctgGCATTTGTGTAAGTCCACAAAAGTAATCAACCCGGAAATCAACTAGA CCTTGTCNatgttcgattgcgttcgattgatgttcgattgagttcgattg cgttcgatcgtcgattcattgacccccggattgttcatcgcataatttct aaaatataatggtaaattgaaagtaatttaatttggcttgtgatgtttga gagcttggatgttggagagcttggatgttgggaagctgcaagaataaagc ctgACGATTtcaatcgaacagaatcgacgattgaaccagtcgaacaacaa tcgaactaatcgaatattacccatcatccatttttgcctaagtgcccccc cccggctCCAAAAGCATCTACCGAACAGtttaaacttaaactcctatatc aggattagaaactaggctagtcttacctcttttatcNCGAGGTCTTTGAC TTGGTTTTTGGTTTCAATTTGGTCCTGGGTATTGGAATAATGAACTGAAT TTGGTTTCAGCTCTTCATTTTTCGCATAACATACCAGgtgcaccacaaaa aagtttctctctttgaaactgattttctcgaaatctaagaATTAAGAAGC AACATATCATACGTCACACGAGGAAGAATGGGAGGACCGTTTAACAGATG AGAAAGTGCGTGCATGGAAACGTGGAGTGAGCGCTTAAGCTGGGATTTAC TGTAAGACTGAAGCCGTCAAAAATGGTCTGATTAGATTGAAATCTtacac acttgttccttggctgaatatctgggggtgtttctgggggaaaattaagc atatggcaagcataacttgagcctacgaaaaatgttttttcctgattttg gcttttttttgctggaattttatggattttttgTATTTCCCTAAAtctat gctttagatttaagcatcccttcaagcatttttcagccttattaagcttt cgacctaagcatctctgagcctgttttcggattcttgtatgcttataaaa aaaaaacatgtaacatGTTTGACAGTATGGTAACACCATTAAATCAGTCA TATTAATTTACATAAATTTAGAAGTCACTGTCTGAAATAATCAGACACTG TCAGAAACTCACTTTCTTAcaaatggttgtttttttagatattttgatat tatcaATCATGTGAGCTATGTTTGAAATTCCCAGGGTCTAACTCCAAGCT GTCCTCATTTTTGGGAGTTCGAAGTTTCAAATTGTGGGGcctgttttaaa gaaaaaaatgaaaatatgacATGAGTGAACTTTTTAACTAAAATTTTTAG AGAATGGTTGTCACAATTATATTTGAACTCATTAATCTGGATGAAAATGT ACAcaactttgaacaaaaaaaagaatatgtatAAAGAATAAAGCGAATGG TTGTCCAtaattttgagcattttctttgtcaaagatttctaaactaaagt aaaaataagctgaaaataatttcaaaacggtTTATTTCCTTAGATTTTTT TTNTGTAGCAAGATACCCTGCAATTAATTTacgagggagtgcagacgttt atgatatattcattatcttttgataaaccaaagacaataattacagtgtc gtaaaaaccgctctcgtccataaattttgcagggtatcctgCTACGTGAT TAAGAGCtattaacttgaaattttgacttgaaaatttgGATGATGATAAT TCGAATAacaatttcatcattttgatCCAGTAATTATTGttcattgtttt ttgtttaGGATTAAGGATGGAGCTTCCAAAGCATGCTGATTTGAGtacag aagaaaaaaatgctaaagTTCGGATATCATATGAAGACTCGTCACCTTAT Nataatcgcacgatgagttattttgtcttatttggcgcgcctctaaagag agcaattaatcgttgattgcatcctgtagagagcaattaatcgttaatca cactcttcaatgacgcgccaatgtttacaaaattgattttaatgtttttc ttacatttttttatNTTTGAAGTACACCAAAACGTTTCCCACTCCACCGC CAAAGAACTGGACTTCACAGCTTGGTCATGAAAACTGGGACCCAAGGTAA TTACAATACTGGCTAGTTaagttattttttaattaattttgaaattgaaa cacCTATTTTTGCTTGAAACCGTGAAGTAGatcatttttgctgtttttgg tcattttttgccGCTTTAGGCCTACTTAAAAGGCCTGTATCTTTTTATCT AAGAAATGATAATGAACGAAAACGGTAAGATTCTAATATCCTAAAAAGTT TAATGTCCTGAagcagaagaaaaaaatattaatttttcctTCTTAATTCT TCAAAAACCTTTTATCTTTTAGATTATTCTCCTTTGAAAATCTTTCCAAC AGTGTAAAGCTTTAGTATAGCATTGATACATGTtgagaaattgtcaaaaa agtaTACACTTGTATAGTGTACACTTACTTTTGGAGACGGACTTAAAATA TATCTGttctaaatttttgatgaacacTTATAAAAAAGAAGCGTGTCAAA AACCGGATCACAACTTTATgcagtttttaatttttttttagacaATGTTA AAgcgattttcaaaactttgtacTTCGTGGTACTACTAGTGAAATTATAC ATCGAATCACCTTGAAAAATGCTATATTAGCATGAAAATCTGAAATGCGT TATAATGCGTTAACGCCTGAAAAATAATTTACGTCGTGgcgtaatttttt ttcgaagtttacCAGAAATTTAAATTATATAAGGCTCTGAAGTGATGTGA TGAAATTCTAACGGGCGTATGTCTTTTTCTAAAGGTATGATGGATATTGT GATTGGGCGATTCCTTTCCAACCGGAAGACCCTTTTGGTGGTATGATGAG GATCATGCAAACACAGATGATCTATGGAGCTTTCAGTAAGGAAGATCTAG TGTACCCCGAGATTCAAATCAAGAAATTGTTCGCAGCACCTTTCGAGAGA GCTTTAACTGAACGGTCGAAAAGTAAGGAACATTTGCGCCTTCAAAgtaa gatttttgttttgaaatattctttgacTCCATTCATTACGTCATACGAGG AAGAATGGGAGGACCGTTTAACAGATAAGAAAGTGCGAGCATGGAGGCTT ATTTCGTGTTACGGTGAGACTAACTTGGACACCCTCCACGATCGTATCCT GGGTCCGGCTATGGGCTGGTGTCGACACTTCCATACTTATAAATACATAG TACCAACCAATGGTGCTTGCTTTGGCCCTGGGACAAGCGAAGCTATTGAT AAAATGCACGCCATGACGTCATATACCTTGGATTCGAGTAAATATCAATT AGCGCATCTGTTGCGAGAACCAGGGCAAAGATTAGTTTACATCTATGATC TGGGTGACACCTGGACACATAATCTTGAACTGGTCCAAGTCGCAAATCGG GGTGACCTCCTGGAAATGCCTTGCGATGATCAAGTTCAGAATGCGCTCAT TAAAGAATATAATGGAGAGCTACCAAAGATTAAAGGCGTTCAGTTGTTTG CCGGTGAGTTGAATTGTGCACCGGAAAATTCGGACGGATGCGGTGGCATG GGAAATTATGGACATTTATTGAAGAAAGGCAAAAAACACATTTCCCCTGA AGCTACACGCTCGCCGAACTGGAAAGACCATAAAATCAAAAACGCTTTTA AGTTTGATTTAGATGCGCACCGAAAACGCCTCGCTGAAGCTATCGCTGGA AAAAGTTCCGCCAAAACCGGTCAAAAAATATGCAACATGATGTTGCAACC TGATTCTCATCGCTTTTTGAATCAACAGACTCGCCCGGGTGAGCGTGTCC ATGAGAAATGTGTCGGTAGCCTGAAAACAGGATGCGTCCCGATGTCGGAA ACCATCAAAATCCGACCTGACAAAGAGAATGAAGCCGTGTGCGCAGCCTG TGGACGTCAACCGAATGTCCAGGCTGGTTTCAAACCACTCTTAAGATGTG GAAGTTGTAAAGCCGCATGGTATTGTGGGAAATCTTGTCAACATTCAGAT TGGAAAAATCATAAAGATAAATGTGTCAAGATGAGGAAAGAACGTAAGGA GTATAAGAAAGAGGTGTCTTCTTGTGACGATCAAAAGGTCTTGGCTGCAC GATGTTCTAGATAAATGTGTTGTAAGAACTACTCGGTTCTTCTAATTTCT TGAGTTGTGATTTAAACACATTGTTCTCACCTGTGACCCTATCATATTTG ACAAACTAAACGTTACAACgagaaatgcctttttaacCAAATAATCATCA AAAAGTCCTTGACTACGCGATATTGTTGTTATTCTGTGACTAGTTAACAA ACTGAACTGAAATCCTGAAAACTGGAAGGCTTTATTCAATCGGGATATAC CATTGATAgtacgttttgcttttttcgatgaaaagtttttcattttggta TTAAgatttgtgttttattttaacaaATCCCTGTTTCTTTTACTGACTTT CTTAATTTCTGTCCCTTAAGATTACTCTATTATCGATCCACTCCCATTAA GATTTGCTTGGTCTGTCCTACCCCAAGTTCTCTATTGTCCTATGCGCTTG CCCCCTTTTCTTAACGATAGCTATCGATCTTTTTAAAGGCCTACAATCCG ACAGTCCTAAAATGAATGCCAATTATTATTAATTtctggaaaaatgtttt tgaaagttccctatTTTCCCTATTTCTGCTGTTTTAGCCTCGCCCTTTCA AAAATTTCACCctggacatttttattccaaccccgtttattaggttttga gaatttttccacccaccccgtttattccaaacccccgtttattaggtaTC TGAGAGTACACTAATTAGCTTAAAGATTATTGACAGGTCTAGTTTACTTT TTTTGGATGTATTTCGTCTGTTTTTATTCTACAGTTTATATTTTTCAGGG ATAGCTAGATTTGAACTTTTCCACATTTTTGTGCATTTTCATTTATATAC TGGTATAtttttttaccagattttttcaACGTTCTTCTTGAATATTcctt ctgaaatatttttttccagacTGAAATTAGAATTCATTTTTTTAGATCAT CTCTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008282TCONS_00008282Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008282-proteinTCONS_00008282-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084supercontigsc0000084:326047..332602 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.29 9.61 10.99 10.73 4.77 4.15 3.96 5.61 1.91 2.12 1.06 1.26 0.98 1.09 1.13 1.5 3.17 2.78 0.06 0.19 2.91 2.68 7.4 5.73 5.44 8.13 0.62 0.89 4.97 4.86