XLOC_004451 (gene) - C. hemisphaerica

Overview
NameXLOC_004451
Unique NameXLOC_004451
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000080:615050..622851+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004451 ID=XLOC_004451|Name=XLOC_004451|organism=Clytia hemisphaerica|type=gene|length=7802bp|location=Sequence derived from alignment at sc0000080:615050..622851+ (Clytia hemisphaerica)
TTTAGCATgaaataatcttttaaaaatgaTATCCAGTACTTTTTTGAGAA GAAATCTGAGTTTAACAAGACCAAGGTTTATGCACCAATCTGCTGCTTGT CtatcaaatgaaaaaattagaATTGGATGTGCATCTGGCTTTTGGGGAGA TACATCAGTTGCAGGTTAGATCTTGGTTATGAATGAAGCTGATGTTTTTT TACCTCAGCTAAAATTCTTTCAGAGAAATTTCTTTTATCCTCTTTTTCCT CTTTTCTAACTAAAATAAAGCACTCATAATGTCAGTTTCAATAAATGAAA CTCAAGTATTGAGTTAATGTTTAGTGTTCTGATTTGTGTTTGATGCTCCA ATGTTACCACGTCTTCCCAAAGCTCCTAAAAGATACAAAGGAATGAATGC CACTAACAGTGACATAGCTAGAGCAAAGCGATTCCTATGATCTCAAGatc aaataaaagtaaataaaaatctTTGAAGACAAACAATCTTCTTTGAGAAA TTAGGGAAAAATTGCTTTATgtcataattgatgacgtcataaaacttaaa atttcaaTATCTCAAAAACTGGGTCCACACCCtatgttttttttcaataa atttatcATTTTCGTTTTACAAGAAATCATGATGCCTTAATAATAAGCGG AAAAACATTCTGTCTTAATGATTAACAAAACTTATTTCAATTTAAATACT TgaatattctttttatttttctagcCCCGCAACTTGTTCAACATGGAAAT ATTGATTACTTGGTGTTTGATTATCTCTCAGAAATCACAATGTCCTTACT GGCTaggatgaaagaaaaaaatccagtaggtattttaaatgataaaataa agTCAATGAAATCAaaggaaggaaattttttaaatcactTGACTTGTTTT TTAGGCTTTTGGTTTTGCTCCAGATTTTGTGAGGTTTGCCATGGCACCTT TGATTCCTGCTAtcaaaaagaaaggttttaaaactttgtttttcacCTTT TTAGTCCAATTACAAGGATCTAATTAGCGTATTGCATTTCGCAATTTACA ATGGGTTTATTGATTACTTACAAgctataaaattgaaaattaatccATTT CAGGATGCAAAAaccatttttgccaaaaaaagtgCGATGCACTTTCCAAC CCTTATTTCGATGCATGAATTACAGTTCTGAAGAGTTTATTCTAATTGTC AAGATATAAGTTATTTCAATATCATCAAGattttctattgtcttaaatGT ATTTTCCTAATGTTATTTTTTCTGAGTTGACCAAATTGTACTTATCCATA CTACTCTTGGGTATATGGGAGTGGAATAAGTAGGATTggtgaaaaaatct gaaaactaAGTAAGTGGAGGTATGGGCTTGGAATGAAAAACGTGTTGTGT GGAAATAGAGGCCATTGCAGAAGATTCGaggcaaaagaaaaaactttgaa aaatattttaattgataAGGTGGAATTGTTTTCTTCTATTAACAGGAATC AAGGTCATCAGTAATGCTGGTGGTATTAACCCAATAGCTTGCGGTAAAGC ATTGGAGAAAGTATGCGAGAAACATGGTGTCAAGATGAATATTGCTGTTG TCACTGGAGATGATATCTTAGACAAGGTTTTGGAATATATACTTTTTTAA TTTAAGAAATTAGCAATCCTACCCCAAATCTGTTTCTCAAAGGCTAGACC ATGACCTCATAGAtttcttatgaaaattttaaaagaaaggaaaatctttt taaaagtaTGAACAAATTTATTTGTGGTTTTAGAGAGAAGAACTGGGTGA TACTCTACCACAGAATATACACAGCATGAATGCATATTTAGGGtatgatg ttttatttttatgtatgaaaaattgaattgtcAAGAACTGTCACTTCAAT GATAAAAggaattttgatctttttaaacTGATTTTTAAACTTCTgttttc ttgaatttaaaacatttgCCTTTCAGTTGTGGTCCTATAGCAAGAGCTCT TGATCTTGGTGCAGATATTGTTATCACAGGACGCTGTGTGGATAGTGCTG TTACTCTGGCACCTCTTATCCATGAGGTATGCAATCTGAGAAATTTGTAT GTCTCCTTTGTTGTGTAAAGTTCATCTTCCATCTGAAGCAAACTGCaagt aaaataaaagttttttgttgaatGAAACTCAAATTGAATCTTAGCTTACC TAAATGATTTAGGAACCATTTGGTTATTTAGTTTTTTAGTACCTTTTGAT GATTCATACCAAAAGGGGAAACACTCTTGCCCTCTAAACCACCTAAGATG GTGTGGTAACCCTTTGAGGGAAGATCTCAACTACAGAAGGGACATTTTTT CATTTGAGGTGGTATTTTTCAACATATAATTTATATACTATTTGTTCTTC AGTACAATTGGAACATGAATGACTACAACCTGATGGCTGCTGGAAGGTAA TTAGAAATAAGGAAAACTTTGACTAAACTTTGCTTAATTGTTTACAGTGT GGGAAGGGTCATGTGAATCTCCGAGCAATTTCGAGTACATATAAATTCTT CCAAAATCTATTAGCATATTGCTAGCAACACTCTTGTTGAGTCTTGCAAT CTATCAATTAAAGCCAGCAATAAGCTGGCAATAAGTGTTTGTGTgaattc tatttttagaaaaatatttgacctAAGGTTAGACTGTTGCCAGCAAGAAT TTCATGTTCTTTGAATCGCTTGTATGGTCACACACATCCCCCTTCTTGGC ACCCGTCACCCTATACTTTTAagaatgttgttgttttttacacttttcta CCATGGAGTATTTTGATAATGATTTTGGCTAATTTTACCTTTGAAGACAT ACTAAAAGTACAACAGAAAATATGCACTTCTActaaaaagagaataaaaa aatcttccttTTTTAGTTTGGCTGGACACATAATTGAGTGTGGAGCACAA GGTAGTGGTGGTATTTTCACAGACTGGGAACTAGTCCAACGTTGGTAAGA ATAATTAACCACGAACTTCTCTATCAGTTAGATTTCAATTTCCAATCTGT ATATCAGGTCAAAAAATACAGCAATGCATCTTAAAAACTGATTGTCTCTA AGtctccattttgtttttttatttcagggaGAATATTGGATTTCCGATAA TAGAATGTGAACGTGACGGCTCGTTCATTGTCACGAAACCTCCAAAAACT GGGGGATTGATCACCAAATCAGTCATTGCAGAACAGGTATCGAGATTTAA TTGctgttattcatgatatgcatcactgcaatgaattcacgaaattatgc aacttttctgtttttgttccacccaatacgtcactttttcaattgtttaa gtgacgtattgggtggaaaatcttaaaagttctcagaagactctccagtg gtgcatatcctggcatatcatgaattaataaATAATTTATAAGGACGTTA AATTTGGTTTTGGGAATGGATACCTATTGATAAGATCATTTAACTTTCCT AGCATAACACGAATTAATGGTTCAACAAAATGTTTTATCAGGACCAGGGG TTCTTCTTTGCAACGACCTTGATTTAGAgtatattttatcaaatattttt ataaccCCTTTCTTGATAGCGGAAAGAATATTGTATCTATATTTCCATTC TAGATTTGCTATGAAATTGACGACCCAGATTGTTACAAGCTACCTGATGT CAATTGCAGTTTTTCGAATGTCAAATTGGAACAAATAACAGTTGGCGATG AACCACAAGTTCGGGTTACTGATGTTACGGGACGCGTGCCATCTGATACG TATAAAGTATAATATTTTGATACTCTATGTATGGTCACTGATCTATTCTT CACCTTGCATTATTCACTAGCACTGAAAGGTTTATTTGTTGCTCCAGTAT ACGATTTGTAGTTGTTCCATCAAACAATTAGCAagagtttttttcacttt ttgaaaatccttttgcTAGGTGAGTGCCACATATCTTGATGGTTACAGAG CAACTGCTGTTTCGCCTGTGGTTGGTCCTCATGCTGCTGCAAAAGGAAAG CGTGTTGCTGAAAGCATTATTCTTAGGTAGGATATACTAGTAAGGTTTGT TGTActgaaatattattattattatatataataTTATTATGTATCCCTAT AGCCAAACGAATAAAAGAAAGTATCGCTTCAGATCGCTTTTAGAACAgaa gaaattttgtcaattATTAAAGGTGGCGAAGGTGGGTGGCTCTTAAAAAG AAcaagattattttcaaaatttcaaggatgGATGTTTGTCCAAAAAGCTC GCATGTACCTTAAATGGATTAACTTTCGTGTGGATTAATCTTtttgcgat tttcgcgaatttcggccATCTGAAAGAAATTGGTCGAAAAAAAGGCCAAT TCACGAAATTTTTGGATTCTCATCAGTTCACGAAAAAAGTCCGCTGTAAA TTAACCCATTTAAGGTATTGATATGAATGTGATTTTATTTTACTCCAGGT GCCAGAACCTTTTCAAAGCAGTTGGGTTGAAAGATTTTAGGAAAGTCAAC ATTGAGGTGAAAATAATGTttatgttaaaactttttatgatgcATACTTG TCCATACAGCCTTTCTAAAAGAGGAAACTGTCATCATCTACTTTGTGAAT TAAAGTCTACCAATGATAATAGAACTAGACCCAACTCAACTCATGTTTGT ATTTTTGTTGTTATTTATTTTCAGATGCTGGGAAGTGAAGATAACTATGG ACGAAATAAAAACAATACGGTAAATTTGCCAATACTCTTGATTTTTGTGG TTctaattgtaaaattttaagccttttgaagtattcattttcaccaactt gaCTTTCTCGTTCGATATACAGGCTTCACCATCACGAGAAGTTGTTTCGT GGATAGCCGTTGAACATGAACAAAAAGAAGCTTTAGAAATCTTTGCAAGN CTAAAATTCTAAGCCTTTTGAAGTattcattttcaccaacttgaCTTTCT CGTTCGATATACAGGCTTCACCATCACGAGAAGTTGTTTCGTGGATAGCC GTTGAACATGAACAAAAAGAAGCTTTAGAAATCTTTGCAAGGGAGATTGC TCCTGCGGGAACCGGAATGGGTCAGTAATAACTTGCAACCTTTTCTACTT TCATATTATCGAGTCACTATATCAATCTTGTCTGAAAAACTTTCGTTTGG GGAGGGGGTCGCCAGTTTATGGAACAGGGTTgctcaccaaaattagttca ttGAAAGTTATTCAGCAAGAACCTCTGATTTACACTTTCTTCTCCATTCC AGCACCTGGATTGACCACTATTGTTGGTGGACGACCGACTGTGTAAGCCT CTTTGTTAATAATCCCTCTTACCACGTTAGGGGAAGAAAGAGCATTAACT TTTGCGAATTCGGCTTTTTAAATTACTTTGCGAGAAAAGACTTTCACGAT tcacatttttttcaagattttcactaatttttgtgaaaaagaggGTTGAA ACCTGACTTTCTTCACTTCCATCAGCCTAAAATGTGTGTTAAAATTACTT ATTGCTGTAAAGAAAATGTCATGAGAAAAGGCAGATTTTTaggaaaagta tttttttcgcGAGAATAAACTTTTACGAATTAGCATTTCAGAATATTTTG GGGAGATAACTTTCCCGAATTTACCCGAAACTCGCGaaaatcgcaaaagt ttcttcttCGGCTTCTTCATGTTACTCTGGAATCAAAAGCTTTTCGAACA AGAGAGAAATGGAATTTCACGTTCTATTCACATTTAttagaaaattaaaa tgaaaccCTTTTGAATAATGGGGCTTCTTTACATGAGAGTTTCTTTAATT TGAATCGAtttaaatttgtcaaaaagctggtgtttttttGGAATAAATCA AGCCTCGAGAGATTTAATAATTAGACTGTATTCAAAAAAGGTTTCTTTTT CAGTTAGTATTTTGTCTTTAGCTATGGCCAAATAATCATCAGCTctctgt ctttttttttttttttagatcacCGGTGTTAAAATTGCATTCACTTCAAT ATCCTAAAGATCAAGTGAAGGTATTGTTACGTTAGTGGTGTCCTCTTGAA AGTATGTGTcggaaaaatgctcttaactttgatgttttttattcaaaaaa atgaatTGTTGTTTTAGATAGATATTTATATGAATGGAGAACATGCGGAG ACGTATCAACCACCTGTTCAAGTAGAATCTTCATCAGAAAGCGAACCTAT TGCCGACACAGAACCAACAACATCAAGAAGTATTTGTTAATATGCTTGAA ATCACGCTCCCTTTTTTGTGTCGATGATTGATTATTAAAAATCTGTTACT CGTGTATGATCAACGTCAAGGGAATTGTATTTGGGTTTACTGGTCTTCTG TTTATACTCAGTGCATTTCCAACCCAAcaattgttattttctttttcacc ttTATCTAAGCAACgctaaaaagaaatctttttgcagtTCTGTTAATATT ATacttttctcttctttgttAGGGCCAATGATGAAAGGAAAATGTACCTT CCCCTTGGGAGCTTTAGCTTACACACGAAGTGGAGATAAAGGAAATAACG CCAATATCGGTAAGTTAggattttttgaataaaagttTTGTTATTATGCT CTGAAATAGTAACTAAACTGGATCACTCGTAaagtcaaacttttttttcc gaAACTCATTATTTAACGCTTCCAAATCATTCTTCGTTACCCCTCCTCTT GCATTACCGAATATACAATTAttgatgaaataattttgacCTAATTTCTT TCAGGTGTTGTGTGTCGAAACCCTGCTTTCTATCCAGTTCTGAAAGAAGT TTTGACAGCGAAATCCGTTCAAAAGTATTTCGAACATTTCTTTGAAGATC CATCTCAAGTTAAAGTGACCaggtataaatttctcaaaaaaaagtaaaga caaaaacaaaattttgttaacTCTTGACGTTTCGATACTTCTGGTATCAT GATCACAAGCAAATAGTTAgcttacaagcaaaaaaaaacgtgttgataaa tcaaaatttctaaatcacATCTAGCAATTATAGGTCTTAAAAGttacata aagattaagaaacggtGTATATCTTCtcaatacttaaagtttcttgctta cgccttcatcagttgattagaaatcaaaagttacaaatattttgcctgat aaattattcaaaaaagctctgagttgaaaattaaaaaaaaaaagaaaaaa aattgacatccAAACATTTTATTGGTCAATTAATTGAAGCGTATTGTAGA ATTTTAAGATGACAATAAGTACTCTAGAAAACTTAGACCAACTTTATGGG CTTCCAAAGTAACTTTGCAAATTTTGACGCCATTTTTAACTTCATCATAA AATATCCATGATCTTTCAGGTATGAGTTGCCTGGCATTCACGCCTTCAAC TTTGTAATGGAAGATGTTTTAGGAGGTGGTGGTATCGCTTCACTCAGGTC TGATCCACAGGTAAACCTTTAATTATCTTAAAGGAGCTAATATTTTTGAA ACCAATTTTCTTGGTTCGAGGGTATGTATCGAGGAAATGGGTGTATTTTC TTTAACAGAactaaaaaagcggttttttgggattttctcgagattttctt atttgattttttgtacatagaGGCGcgttagtactgccgaaaagatgttg aaaaccgttttccgaaaaaaaaaattttccggcctgTAGAACccgaaatg tgccggaaatcgccgttttttcgTATTTCCGTGacactttttcaacttat tt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007848TCONS_00007848Clytia hemisphaericatranscript
TCONS_00007849TCONS_00007849Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007849-proteinTCONS_00007849-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080supercontigsc0000080:615050..622851 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
64.64 62.02 116.03 114.6 83.38 67.88 50.57 58.52 77.87 85.94 82.49 67.86 38.71 35.19 55.31 79.34 52.51 40.96 17.66 30.44 22.16 24.98 32.2 34.05 24.42 23.66 63.51 48.76 59.96 40.45