XLOC_004433 (gene) - C. hemisphaerica

Overview
NameXLOC_004433
Unique NameXLOC_004433
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000080:39260..46062+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004433 ID=XLOC_004433|Name=XLOC_004433|organism=Clytia hemisphaerica|type=gene|length=6803bp|location=Sequence derived from alignment at sc0000080:39260..46062+ (Clytia hemisphaerica)
CTGGCTTGTGTAGAAAACTTATAATCTTTATCTCAGGCTCTTGTACTATG ATGGGTAGAAGTTGTAGCTTTCACTTTTTCAAGAGTTTCTTCCTTTTTCG AGACATCTTGAAATAATGAAAGGAAGAATATTTTTCGAACAAGTTTCTAA TGTTAACGTGAAAATGCACCCTTGTTAATGGTTTTCATAATAGCAATCag taatttttgtattttttatatatttcagaactataaaatacaaaaaaatg ggGTGTACGATAAGTCAAGTTGATAAGGAAGCCGTAGAGAGGAGTAAAAT GATAGATAAAAACCTAAAAGCTGATGGTGAAAGATCAGCCAGAGAGGTCA AACTGTTACTACTTGGTGAGTTGAATTAATGCTtattttggaagtttttt gGTTATCCATTTTACACATTGATTGTGCTACTGTTTAAAACATGGATTTA TTGTgattggttttatttttttaagttttgatgAAGACAAGTTAAATCGT ATGtagataccgtcaactgctctaacttgggacgattggttgaaacatgg gactggttgatatctggcctgtattttcacttacttttatatctctttga caacaaatttgttttgatatataaaCTCCACCatgtttatcaatcatact tcttcgttcctcttacagtgcacagacactcgcgtgtgttccactacgga ttttttcatATTGCGATTTAAAagctactcggtgcgaaagagaaatcgtg tattttttaatacgccgttcatttactcaaatcaaatgactttgaaggct cggtgaaatggtggccaaattgccgtcctatgttttgtcagatagtccca agttagagcagttgacagtacatGGAAAGTCAACGACATAAATGGACCTT GGACACAAcaatattttaaacaattttccaGACAATGTCATCAAAATGAG CTAAAATAATAAAGGGTCACTCATGTCACATAAAATGTGCAAAGGGCTGG GTGGGCTGGGGTGGGTCAGAGGCTCTAACGCTAAGAAATCTGCCTATAAT ATCTATGTTTTAAAACAAGAACTCAGACAGAGATtgggcagttccagaaa aaaaccattacccccccccctgtggacgacagggttttttggattttttt ctcacttgaaaatcctaagaaatttgaaaaaggttttaGAAAATCCAGGA TTTTTCCTCATTATTTAATCATATATAtcggaaaatccataaaatttgct ctatATTCTTACCAAGTAttggaaaatccataaaatttgctctattttct tgGCAAGTATCGGAAAATCCAAgattttcctataaaaaatcttaatttta cgaaaatcctgaagtttttcaaaagtaaattgttacgGAAAATCCATGTC GTCCACAGGGGGGTAACAGACTATAACTTTGAACCGCCCAATTTGAGCAA TAGCAGCTGTAAAAGACCTTTTCCAAAGGCTTTTGTAGGAAGTGGTACAA TTTTGTACCCAAGAATTAGCACCAAAGACAATATAAATACATTATCTTAG CGTCAGGATAACAtgataccgtaagttggtctaatgtcgacatccctctt ctaatttcgactcCCAgttttagagacaggaataatattaaggtcagaat cactggtTGCTAAGCAAAGGAATATAGTTTCAATAAGTGATTCCGACCTT TCcactattcctatctctaaagaagggtgtcgagaTTAAAAGAGGGATGT CGACCTTAGACCAAGTTATGGTAGTGTTCAATTTCTTGGCActtgatttt gatctttttgggGAGCCAAAAAACTTATCACATGCAGTGAATGTCTTGGg gatgggtgtaggttgcagaAATTTACTTATGGCGAAGAAATTTTCACCAG AAATATCTTTTctttcaatgtttgttttttattgctttactgttttgaaa atatatataaacttAGGAAGTAGTATGTGAACTGACGaaacaatgatgaa attttaagattaagTTTTATTGCCACAGTGACATTATTATGGAAGGAGGT TGGGGATTCTCAAATTATTGGTCGCTAAGATtatgtaaaagattttttgt ttgtataaaatttatcTTTGGTGTGGTTTTaacgttttcaaatttgctaa aatttatCAACTTTATGTTTCCAGTTCAGGCCAAATtctagaaaggcagg gcagcgtcCGCTAGAgaccaaaaagggcacttttctgctgtttttttttt gcatggtACTTGCTCATACTGTTGGTGCTTGTTACCAACTAACTCCAATT TTGGGTTGAGTGATTGTACAACTCATTTTAAGCTAGTACCtgttattaaa tttttattttggttggGTAAATTGGGTAAGGATTTCTCAAATTTGGCAAT TAAGAACAAAGATCTTCCTGATTCTCCCTCAAAATTGTCAGATTTCATTA AATGAAAACATattatactgattttctaattttgaaaaatggaatTGTCA CATAAGATTTTCCAGAATTttaagctgggagcaaaccatAAAACATGGAT CTTCAAACTTTTAAACTCTCTTGTTGAATGGTTTGCACAGCATTTTCAAG ATTGTCTCAAACATTTATTTATTGTATGTTGGCCCCCTAGATGTTTACAA TTTCGAAATAGAAGTCATATTCAATAAAAAACACctatctgattggctaa aaaagTGTTAAGGTGCAtgctatttatttttattattttaaactGTTATT ATTTCAGAATGAGGCAGAAgttaaaattgactaaagataGTTCCCTGAGT TCCCTGAGTTCCCATGATTATAACCATCAAACAGTGCATTAGTGTAGTAC TGTTACAAAAACATATTGTAAATAGGAAAAACTGTTTTGGAATATCCCCA GAACTTCTCTATAGGAGTTATCTGCTCGATTATGTTGCCCCAAGAATTGC TGGGGACAatcccttttttagaaaatttaaagaacTAACAAATTAGTTAG GGCATTAcactttataagcatacaaTAAGTTTTTGGGAGCCTTATGCTtt gcaaaatttatttttgagccttaaatatGCTTATGCCATGGTATAAATTG CACATCATATTATTGTAATTTTTGGAGATTGAATGCTTTGAAATTCTATA TACAGAGGCCCAGCATATCCCTCCACAGCTCGTGATCTGCCATTGAAGTA CCCAGTTCCTCGATCTCTAGCCCTTTTTCCtgtttcaaaatatcaagaaa tgtgCGCTTTCTCAAGTGCCTAGGCAGGCCTAGGGCCTGCAGGACATTAA GGTAGATTTTAGATAAGATTTCGTTTTTCGCACATAAACAGTGACCTGAG AAAGAGAGCAGTTTAATTTGGCAGAGTAATTTAAGcctggatatgcttat aagtatACAAAGGAATATTACCCTGGGTCAAGTAATGACTTGACTTGTTG GCtattattttcttataatatTATTGAAAATATAGTGAATTACTTTAGAC AAAAAATGACGAGTCTAATGATTTAAACAcaattgtttattttctttgaa aaaacaatgaaTTTTCTTAATAACAGACAACTCTATGCTGTGGAGATCCA TCATCATGAAAGAGCCAAGTGCATTTCTTGAAGATAACGCTTAAAAAATA AAGCAATCAGATTTTCATATTCTTGACACCATTCCAAAgtttccaaaaaa ctgaaaagttttataaaaagtaaatctggtacactctttttttataagca taacgtttataagcatacttacgCTCAAATATGGCAAAAAATAtgcataa tgctaagcatacctccaagctAAAATGCAGAGCCAAATTAATTTTCTGcc ttaaaaaattcgaaattttcatgaacccaaagaaaatcaaaaatggaaat ctaagcatataaataagcataaattgaggctgaaaatgagattttgctaa gcatataTTGAGCCTCGACCTAATTTTCccttttgcttataaaaaaagag tgaatGATGCTGCTTAACTTGTGATCGGTCATGTGGAATTTCAGACTTTT TTGCTATGTTTGGACCAAAATTTAATGTCTTATCTTTTGTGGCCctaaaa aattgcaaaacttTCACAAATCAGCCAAAAATTTGTTGAGAATGGCCTGA AATGGCTCTTTAAAAGACAATTTCTTTGGATAATAAaggaatttttgaat ttgaattaatGATTTACTTGGATAAATTCATTTGAAACTGTATGTTTGGT ATCATTCTGTATGGAGATTTTCAAATCACTGCTGTATTGAAACGATTCAA AAAGAGAatagtttttcaagattttcattttatacaGCATTTCATTGGTT TTATATGATACCTTCATATAAACTTGTTCTATGATACGAAAAAACCTTTA GGCAGTTATACCACATCTTAGATTTCTACAAGTATTGATTCAGTTGCTAA GGGGTAGCTTattatcaaaattaaattagGATGAGAAAATTCTTCTCTTT CTTTAAGCTCACTCTCTTTAGAAAGAATTCTTCTGCCAGatggtttttca tgttttgtttcTACTTGTAACGCAAGAAAGAAGATTTTTCTTcgtgaata aaaaaaaatgaaactcaAAAATAAAGCATGAGTTTATTTTGGATCttaat ataaagtttttttatcatcaacATGGATATCCCaaataatgaaaatgatt tcaagcaaaaaagacATGTTTTGATTTCGAATTTTAATGCTTTGTAGCCA AGGCAACACTTTTTAACACTAGATTTAATTTCTATTTTCTGTTATCTACC TTACTTaataatttacgggaaaacagATTCTATGTTAAATTAATTTGATA AagaattcctttgttttctttttcaggggCTGGTGAGTCTGGTAAAAGTA CTATAGTGAAACAAAtgaagtatgtatttttttatgttttctccCTGTTT TTCTTTCCCAATATGCCGACCTAATCAATTTTTCAAGGAAGAACAGATTT TGTTATCcacaaataaaaaaacttagTTTGAATGTGATGATGTACCCAAT ATAATAAAGGACTGGTCATAATAAATGCACTACACGTATATTACACTATT TCCATCATTTGTGTTATAGAATTATTCATGAGAGTGGCTATTCAGAAGAC GAATGCGTACAGTATAAACCTGTCGTCTACAGCAACACTATACAATCTAT GTTAGCGATCATTCGCGCTTTGGGAACCCTAAACATCGAATTTAGTGTAC CAGACCGTCAAGTAGGCTCAtttaattctatttttattGTGATTCAGTTT TCCTTATCATATACAGCACTTAATCTGAAGTACATAGCTTTTAATAACCA ACTTAATTACATCCTAGTGGGTTgatttaattagtttttataATGTGTGC ATGTCATTCACAGCGTGAAATGATAAACATGTGTCCTCTTAGTTACAAAT TCCTCTAAAggattttcaccaaattagaTACTTCCTATCTTCCATAGAAA TAGACAGCTCAGCTTACATTAGCGAATCATTCGATACAATAAGGGAGTTA ATTGTCTGcacacaatttttttccaatttgtaAATCTCATTAACATTTCC CTGCTATAAGTGGTTTTTCTATTAAATGGTTTGCGTATCAATGCTTATTG AGAGTAAAACTATCATAATCATCATCTTGTTAGAAAACGGTTAGTTGCAA ATATATTACATATTATAttacatatatttttctgaaCAAGCCTTTTATAC TTTTATAGGAAGATGCCAGGCAGCTCTTTTCACTCGCTGGTAGTGTCGAG GATGGCTCTTTTACGCCGGAACTTATTTCCATCATGAAACGGCTATGGGC CGATGAAGGAGTGCAACAATGTTTCCAACGAGCTCGTGAATATCAATTAA ACGATTCCGCAGGATAGTAAGTGTCAACACATCCATTCCAATACACAGGC TAAATATTTAAGTTGTTCCAAGATTCTAGTCTAGATATGCTTATGACTTT TATGATGCGTTCAGAAGAAATATAATGCAATTTTCAATCAAGTCATTTTA TAGATATAGTTCAACTCTTTTACTCTGCACGGAGAATGTAGTGGGAAAAA TGGTTTCAACTTTGATCATTTTACCATCTTTTTTTCAGCTACCTAGCGGC TTTAGACAGAATCGGAGCACCAGAGTACGTACCTACACAACAAGATGTAT TACGAACTCGTGTCAAAACTACAGGAATTGTCGAAACTCATTTCGTCTTC AAAGATCTACATTTCAAGTAAGACCTAATTCTCCTCACTCTGACgcttat tatatttttttggtttgaagAACGCCCACTGTGAGCATGTTCTAAAACGA TTACTGCGTGCGTAGGACGTTATTAAAACGGTTCGTCGATTATATTACCT CTATGAGAGAAATTTGTATAGTTCCTTCTTTCGTATTACTGGGCCTTCCA CCTATACTACTGAATCACAAAGTTCCCGACGTGTCCAATATTATTATCTT TCAACAATTTCCCTTCAGAAGAATTTTAAACCGTCTAAATATTCTCCTAT TTCAGAATGTTCGATGTCGGAGGTCAGAGATCGGAACGTAAGAAGTGGAT CCATTGTTTCGAGGGAGTCACTGCCATTATCTTCTGTGTGGCTTTGAGTG CTTACGATTTGGTCCTAGCAGAAGACGAAGAAACGGTACGTCTGCAATTA TTGTttgaatttatcaaaaattacgAGTTGTGTGTCTTTATGTTATGCCT AAAGTGAAAAGACATTACAAAATATACAGAAAAATGTTTAGTTTCTATTG CGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007804TCONS_00007804Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007804-proteinTCONS_00007804-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080supercontigsc0000080:39260..46062 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GNAI1guanine nucleotide-binding protein G(i) subunit alpha-1 isoform 1 Homo Sapiens
GNAI3guanine nucleotide-binding protein G(k) subunit alpha Homo Sapiens
GNAI2guanine nucleotide-binding protein G(i) subunit alpha-2 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
85.05 82.66 72.68 74.52 256.42 205.52 251.13 271.03 241.25 247.93 186.12 170.84 130.82 116.84 95.9 102.91 159.28 175.63 107.97 147.81 140.93 146.69 111.54 128.64 132.97 147.97 165.93 155.75 135.89 142.11