XLOC_004431 (gene) - C. hemisphaerica

Overview
NameXLOC_004431
Unique NameXLOC_004431
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000080:14079..19530+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004431 ID=XLOC_004431|Name=XLOC_004431|organism=Clytia hemisphaerica|type=gene|length=5452bp|location=Sequence derived from alignment at sc0000080:14079..19530+ (Clytia hemisphaerica)
gTCAACCATTTCAAAATCCACAAGCCCCAATCAACAAAATAACATCTCCT CGAGTGGTGCCATCTTCTCAACAGATAACTCCTGGCCAAATAACTCCATC AGATTCTGTCCTATCTAATTATCAATACCAAATTGAAACACTACAACGGA AACTTCGAGTTGCAACAGACTTGTGTACCGAGCAAGAAATGGAGTCTAAA ACTTCGTTGAAAGAAGCTGAACTGAATTTCAGGCAATTACTTACACAGCG TGATAGTTTCATCAAACTTAGGTAAAATCCTTCCCCTTTCAAACATTTCA AGATTAATAGAAAAGAGTGAAATGACATCAATCTGCTTGGTGTACATAAG GAATGACCATTTTGATTGTATTTAATCTATCCTATCGGGTGTGTcagaaa taagttaccctctttaaaataaaatttgtcgaCATCTATGAATCTCTAAA GAATGTAACTATTTCTATGATACACAAAAAAGAAAGGTTAACTTAAACTT TCATGTTGGATATTAATTCCGAACGTTTATTAATTAAGTCAAGTTTTGAC GTCATAATGTGATATTTTTCTGTCAGGCACAAATTACATTGTTTTGAGCC ATTGTTTTGACttaataaaattaataaacggggggagggTCCTAATAAGG TTGGAAAAAAACCCAGAAAATTAACAAGCAGTCACTAATTAGAGGACTTG ATACAGAAGAGATCTTCTTCATCTAACTTTTACTCAACTATTCTTCCTAT TGCAAGTTTATATTTGTTACTTTGATGCTTTCTTTTTTCCTTCTAAGGGA ATCAGAGTCAAACAATCAACAGCAATTGATTTCCCACTTGCAATTGACAC TTGAAAAGCTGGAGATGGACAAAGCACATTATGAAGAAACCATCCAACAA TTGAACCAATTCTCTAAAGTACAAAAAAATGAGATTGATTCACTTAAGAA ACAGTTGGACACATACAACAAAAGTTTCAACAGTCTATCACTCATACTAT TACCAGATATGAAAAGTAGTTTGGGTGGTAAGTTTGAAGACATGAATTCC ATTTCAGTCACCAGTATAGCAAATATGGTTGAGAAGCTTTTGTTATGTCA CCGGAAACAAGACGAAATGATGAAGTTCAAGATCCAAAATTTGGAAGGAA AATTATCTGATCAAGATAAATCAAGTGAAGAGAAGCTGAAATACGAAAAG AGGTTCATTGAAGTTCGCCAACAAGAGCTTGTTGGTCAAATGGAGAAATC CCTGCAAGCTAAGGAAACTGAAATCACATCTTTGAAAGGTTCTTTACAAG CCCTTGAAACTAAATATCAAAATGCTTTGAAACGTTTCAAGGAAGAAATT CTGAAATATAAAGCTTCAATGGCAGAAAGTGAGAAACTGTTTGAAACGAA ATACAATGAGATTACCGATCAAAAAGACAAAGCGGTTAAGAAGTTGACCA AATTGCAAAATGGGCAACATGATGTAAGCAACCTCAACCATACCATGAAA actgaattgaaaaatcttcgCGAGAAtgttaacaagaaaacaaaagaata ttcAGATGCTAAACAAGAGAAGAAGAAAGCAGAAAAGGAAACTGAGAAAT TCAAACAGAGAATCAAGGAAATGGTACTAGCGGACGAACAAAAGTCTTTG GAATCAAGAACCACCATCAGCAACCTGGAGGACCATTTAAGCCACCTTGA GGTTGAATATGAAAACCTTCAACTTTATGTTCAAGAACTTACTGAAAGAC TACGCATGCTCCCTCAAGAAATCGAATCACAGGTTCAAGGGGACGAGCAA CAGAAATATGAAGCTAAAATGCAAGAGATTAACAAGCTAATAGAAAACCA TAAATCTGTTTTGGAAAATGCAAACATTGAGATTGAAAGCAAAAGTCAGC TAGTAAAAGCTGGTCATGATCAGATCAAATTGCTCCAGAAGAAAGTCGAA TCTTTGAAAAGTGACAATGCAAAATTAAAAGAGAAGAACAAGGAACTTGA ATCAAAGCTTGGCCAGCGCGAGACGCGTCTGGTAGACTTACAGCTTGTGG CCACAGAATCTAAAGAAGCTCTGAAAGCTTACAGTACCAAAGAAATGCAA AATCGAAAAGCATTAGAAtgttcacaaaaaatgaatctaCAGTTTCAAGG GAAAGTCGATAATATGCATAAAGAGAAGGTCGACCTGGAGGTATCTTATG ATTTACTGAAGAAACAGTTCCGTAAGGTAGAAGAGGATATGAAAAAGTTG GATCAAAAAATTCGCTCACAAACTCAAGAGATTGATACCGTCACAAAAGA TCGTAAAGCCATTGCTaagaaactgaaagaaaaaaatgacgcCTTGATCT CCATGCAACAGAAACACGAAATCAACTCCAAGAACATTTGTATGGTCAAG GAGAGTaatttcgagttacaaaaatCATGTGAAGATCTTGTCAAACACAA CACCAATTTGTCCAGTGATTTGAGATCGTTGGAGGAGGCAAAGTTCAAAT TAGAGAAACTTCTCACAGAGAAAGAAGTATTGAAGGATCAAGAGGTGGAA AACTTGCTGCAACGTTTACAAGGTTCTGAAGCTGATATCAACAGGTTAAA GAAACTGCTGAAGAGATTTGAATCATCTGGTAATACACGTAAGCTTTGTT TAACTTATTATGGGAAGTGTAATGAATGAATGTAGAGCaagacaaaatat aaattttagtGATATTCTTATGGTGTAAGCTTTGGAAAAGGTTATGACTG CTTTCTTTATCAAGTTTCAAGTCAACAGTCCATTTTAATAAACTTTTAAT ATTTATCTTTTTGTTGTGTTGAACATTTGACATCATGTTTGGTTTTTAGA AGCAAAGATTGCCAGCATGTCTCAGAAAGCTGTCACAAAACAAAGAGATG AAGTGGACAGCATCAAAGTCAAGtatgtttttcattttatttttagccAG GGGTTGTGAACTttgtgaaattaattttgttttgttagTTCATAAAGAAG GTTTAGGATGTGTTTAAAGGATATCATATAAATTATCTTCTACCATTCAT TTACATAGCATTTTATTGACCCCCACGTCAGCATTCGATCCCCCAGGTCT AGTGCAAATAAAAAGGTGATTGACTTCCTCACTCCCAGCTTCACCAACAG CCACCAGATATAATATACTTacttaaaaatattaaattcgAACTTTTTAT ATATCACTTAGACTGAATTGGATGAAAGAAGCACTGGAAGTATCTGAGAA GGTAATTCCAATTTGCTTTAGATTGAGGAGAGGCTTCGAATTCTTGTCAT ACCATTTTAATCATATATATGATGTGATTATATTGTTTCTTTTTCTGAAC ATACCTGATAGCCTTTTTGTGGAAATTCATTTTAAGTAGTTACGGTGTAA GAGTTACAGAGGTTTATgagacattgttaactgaagggacgagagaACTT TTTTGAGTTAAGTAGACATTAGAGTGGTAgagattcgagttaaagagact ctactgtataaaAGACTTAATCTCGAATGActgaatctttttctttttcc atagACAAGATCAGAGCTCCAACAAGAGCTTGAGCACAAAGAAGAAGGAA TAACCGAATTGGAACACCAgctaaaaagagaaaaggaGTCCGTTCACAAC CTATCTATCAATTTGTCGCTTCAACAACAAGAAACTAAAGGGCTTCATAA GGCTCTCGAACAGGTCTCTGCTCGTCTCATGTTCATTTTCTAAAGCTTCT TTGCTTGATTCCATATCATGATTTTTTAGACTGATTatgtttttctcaat tttggtTTTATTGGATCATAAGAGGCCCAAGTATTTCTTATAGCATTTTC TCCCACTTTTTTAGGCCTCGATGAAGTATTCTGATGTTTACGCGCTAGTG GAGAAACAAGAACAACGTTTTATCAAAGTATCATTACTTTTGTTGCCCTA ATTCTTTCTACTGATATCTTAGTCCCGAAATGTAGTTTTATAAACTCGGT TTTATAGGTCCGTGCATTTTGTAGATTGATTTAGATCCCacgtaaaatta aaaagaaattaggtATTATGAAGTAGTGCAATCTAGAATTATTCACTTTT TCATAGGGTCTTGGGAGACGAGGTCAAATGCGTGATCAAGATAAACTGGA GCCATCAGAAATCAAATCATTACTTGAAGATGTCCGAGGGCTTTTGtctt caactttaaagaaatcgTCATCAAGCAAGAAATCGCCCAATAGCCCTCGG TCACCGCGTCAACGAAGCAAAGTCGACGACAAGTGGCTTACCAATAGTTT AAAACTTGGACGAAATTCAGAGAAGTTAAATGAATATTTGAACAGTTTTG ATCAGAATTCAACTTCTGGTTCTGTGGTTGGAGCTTCTTCACCAATGAAC TCGACACCGAATGGGAGAACTCGTAAGAAGGTGACGATCGAGGAAGACCA ATCATCTGTTTATTCATTTGATTACACTACTGATGAAGAGTCTGAATACC CCATTCAACATCCTATGCTTCGCAAACATAAACAAGGTATGTACAGGACT TCTATCACATACATGCTGGACCAGATCTTGCCTTGATTATATACCATTTT AAATTATCTATATCTCTTTCTTCTGTCAAGTTCCTGATGACTGGTCGCTC ATGATTTTTTATGGTATCAGCTATGATATTTTTAATTCTCATGGTACTAC TCACTGGCGTCAATCTTCTTGTAATTTCAGGTGGGACGGCCGCCAAGCGT TTACAGGAGAAGTTGAACAACTTGAAGAAGATGGGAGAAGACCTGACCAA CAATAACAAAGGTTTCATAGCTAGCATGGTTGACGGTGTTTTGCTTGCTC CTCATTGTAACACCAGTAAACTGAACTCCAAGTAGTTGTGTTGGGGCAGA CTAACAAGTAAGAGAATGTCGTTGGCAAGAAAGCAATGGACGAAATATAT GATAACTATTAAGGAGTTGAAGTGAATAGAATCGGACGTTTAGACTTTCA GATGTTTCAACATTTTGTATCTCTATTCTAGTATTTAAAAGGTTGAAAGc ttgactttattttttttttgtgagaAAGTTGCGAGCTTGAAAAAATAGTT ATTTGACAGTGTCAGAATAGGAAAAGAAAGCTCGAATCCCTGAATCAAGG GAAAGTACCATCCACGTGACTCGATTTTAAATCAGGATTCCGGactgata aattgtttttttctttccagacaTCGCAAATTTGATGACAAAGCATTCCC AAAAACTCGAAAAACTGACAATAAGTTGACCGAAAATTTTATTACCTAGA GttgtatttttaaaatgttaataTTATTTTTATCATCCTTAAATTATTTG AGATGTACATATTacatgttttgaaaattatttatatACGAATGGAAGGa ttgattttaaatttgttattttaatgaatgAATGGATTACTTGATGTAAA AA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007785TCONS_00007785Clytia hemisphaericatranscript
TCONS_00007786TCONS_00007786Clytia hemisphaericatranscript
TCONS_00007787TCONS_00007787Clytia hemisphaericatranscript
TCONS_00007788TCONS_00007788Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007785-proteinTCONS_00007785-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080supercontigsc0000080:14079..19530 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CCDC158PREDICTED: coiled-coil domain-containing protein 158 isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.04 6.01 2.45 1.78 23.3 18.09 7.91 8.55 5.49 6.62 6.05 4.89 2.63 2.29 5.3 4.51 6.17 6.13 3.43 3.18 3.36 2.98 4.84 5.1 34.86 26.93 2.42 1.52 3.04 3.07