XLOC_004222 (gene) - C. hemisphaerica

Overview
NameXLOC_004222
Unique NameXLOC_004222
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000077:326158..333211-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004222 ID=XLOC_004222|Name=XLOC_004222|organism=Clytia hemisphaerica|type=gene|length=7054bp|location=Sequence derived from alignment at sc0000077:326158..333211- (Clytia hemisphaerica)
AGAGCCAGTAAAGTTAGATTTCAAAAACATCAAAATTATAGATGGCTTTG CTCTTGATGGAAGAGCTATGGAAAAAGGAAATGTGATCGTTTCGTCCACA TATCAAGAAGACTTTCAAAATATTCACATGCTACCACCATTGTTCGATTT TCAGCCTCAAAGATTCGACGATGATAAAGGTTTGTCTACATTCAGAACCC TTCCCAATTCGACCCTCAAAGAAGTGCATTTGGTTTAGTTAAAGTAGGCC AAGCAGGCTATCTAGAAATCTCGCACTCAGAGCCCTCTGCATCACGTTTT TAAATTTTACGGACTTGATATAATTCAACCTTTCGTGAGCGCTATCAGCA TCATAAAAAAGGCTCAAATTCACGCCCACTCTCCCAACTATGATAACGCG ATTAAGCGAGCCTTGTCACCATGCACTAGCAATCCCGTACCCAGCCCTCT TATATACTTGCTTTTTTATTATTGCCATACAGTACACCTTTTCGACCGTA GCCGCTAATTGCCATTTTTTACCATCCTAAAACCGTCCCAGTCTTTTTTT CGCGCCTAAAGACAATAGAAAAAAGTATAAAAAAGGATTGGATCGAGTTT AGGGTGGTAAAAAATGCCCGCCCGGCAATTGGCGGCTACGGTCGAAAAGG TGTATAGCTCTCACGTTATATGGCAATCGTGGTAAATTACTTTTTAAAGG TTGCAGGGTTATTTAGCGTGGAGAAAATTCAATTCAAAAATGCCGAAATA TGTTTTCAATTTTGTATCCGCTTAATAACTTTATGAGGTGAATGTTTACC TAGATATAATTATTATTGATAATTTTCGTTTTTTTTTATAGAAAAACTTC CACAACGATGCTTCCCGTTTTCCCAGCCAATAGTTCCGCATCGTAAGCGA GATAGTGAGATTCCCATTGCACCTGGCTTCAGTACTTTCTTACACAGAGT ATCGAGAACGAACAAAGACAACTTCTTAAAACCAATTCTTAAAAAAGAGA CCCATTCTTCTTCATCGGCATCGCAAAAGCGAAATTCAACAGAAAATAAA TCTGATAAAGAGAGTGATTCACTGTCGACTTTTCGTTGCCAAAATCTTGA ATCAAGATCGGTATTTGTGTCACGAAAACTTGAATCAAAGCCAGCTTCTG AATGCCCAAGTCCTGTTTTGAAGTCAACGTCATCTTGCTTGAGAACTGGA CCTTCTTCGTGCCTCGGGAGTAGTGCACAGGCGTCTGCGCGCCAAACTCC TAATTGTACAACTCCATCATCAGCAAGTAAACACGCAGAGCGACAAGCTA CCGGAGGAAAAGTAAGTTTTGTTCCTTGTTTGAGGATTTTTATATTGGCC AAATATTTAAAAAAAAATCTTACCCACTTATCTTTCTAAAACAAGCTGAG AAATTTGGCTGAAAATTTAACTATGGCCTAACATCGTTCCCGTGTATAGT AGGCTTATTTACGTTATTGACAAACGCCAGCTCTATCAGTAAGTATGAAA CAGCTAATAATGCGCAGGGAACGAAATTGGTTATACCATTTTTTTACGCA GAGAAGCCGAGATACTTATTTGGCGTAGTTTTACGTAGGCTGCACGAATC TCCTCTGATTACCCTGAGAACATACCAGCTTCTGAGGACCCCAAGTAAAG AAATTTTATCGCACATGCGTTAATCTAATCACTGTAGAAAGAATCAAAGA TGAAGAACAAATATTACCATATTAATGTCTAGCAGACTGTATCAATATGC ATGTTTACTATTGACGAATTTCCCAGAAACCTCCGAGTGTAATTGGAATG AGTTTCTTTCTACATGATTCCCAAATGTATAACAGTAATTACTTAACTAT TAATTATGGTAATATTACTTCAATGGAATCGAAATATTAATTGATTAACT AAATCTTTATGTTATGATTCTCTATCACTGACTCTTTTTAAAAAGCGTTG ATGACATATATTTCTAAGTTGTGTTTTCAACGACGCGAAAAAAATATCAA CTTTGAACTTAATGTAGGTTCTTGAGTTGTCGTCATGGTTACTTTTCTCT GTGTTGATTGCGCGCTGAATAGAATCTGGATTATTAGTCGGCACAGGTCG ATATATAATTTCATTCTGTACTTTTCACAGTAGTTGATACACAATCATTG GACTTCTAAACCTTTCTAAAAAAATTGAAAGAGGTAACTCTCGGACGGGA ATTTCATTCATGATTAGCATCCCCTCTATCAAAACATATCAGAGAGGATG CGTACAGCCTAAATCTTATTTTACCAAAAATTTGTCGTCCCGCGCACCTC CGCGTGCACGCATTGTACTGTCTGATTAGACGATGGTATCGTCCGTTATA GTGATAGTAAAGGTAGGAAAATATAGGTATAGCGTTATGGCGGTATAACG GAAAAAATATGCGGGAGAGCTTCGAAAACTGGCAAACTTTACCGACTGTA AACAAACTATTTTTAGCAAAAAACCCGTTTGTGAATGGGCTTTTGGCTTA TTTCTTAGATAGTGATTTATCTTAGACTATAGCATAGTGTACTGTCTGAT AAGAAGTTGTTTAGTTTGCATTCTTTAGGCGGTAGAGAGTATACCGTACA GCTTAAACATGTGGAGAGGAGAGCACAGGCATAATATCTAAAGTATACAA AATATGATATTCTGTTTGAGACACAAACCTTTTTTGACAATCTTTGAAAA GAATTTGTTAAGACATATAAAGTTTCAAATATTGAATATTTATTTAAGTT TCACGATTTAGGGGCCATCATGATGATACTATGACTACAAGTATCACAAA TCACTTTTTTATTCGAAACACATATCTGTTACTTGGAGACATTTTCTATA TTTTAAGATCCAAATGATCTGTCATCTCAAGTAAGTTTAGCTCCGAGTAA AAATCCATTGAGAACTTAGCTTATTTCCTTGTTTTTCGAAATTTGGAGTT CGGGCGAGAAAGTAGATTTTGAGCCATCTCTTAAATTTAATTGGATATTT CAATTTGGCACGGGTTTATAGACTTCCAGGCTATATTATGAGCTTTACAG TATTGGACTGTTTTTGAACTTTTGGATGCTCAGATCCTAAGTGTTAAATC TAGCGCTAAAACTCAGAGTTAAAACTTTACCATTCCAACCTAACTTAGAG CACTTACAAATCGTTTGTGGTTTTGAAAATTCGTGGGAATTTCCCTTTTT TCTAAAATATTACGACCATAACTGTAGTTTTAATGAATGAAATCTGGAAC AGTTAGAGAAATCTTCTTTCTGTTAATAACTATCCCTCAAAGTTACGACC ATAACTGTAGTTTTAATGAATGAAATCTGGAACAGTTAGAGAAATCTTCT TTCTGTTAATAACTATCCCTCAAAGTTAATACATCTTTATTTTTTCAAAT AATATTTAGACTACACTTGTGCCAGAGTTAGTTCTACAAGAACTCGTAAA GCTCGGTCACTATACACCATCGTCTCAAAACAATTCATGTTTCATACGAA AACCCAAACAAGAAAGACTTCTCACTCCTGAAATGAGACGAGAATTTTGG CGTAAGAATCCACATCGTGATGGAATCATCAACTCTGGTCGTGTTCTCGG TCAATCACAGAATAAACCAGAAATCTGGCAAACTGTTGGTTGCATGTGGG ACAAACTTCAAGATAGAAAACCAATTGCTCCGAGGTGAATTTTCTTTATT TTCTACAAATCCATTTTTAAACTGATGTTGTTTTAATGTTATAAGGATAA ATTTAGATTCAGATCTGCTTTGGTCATATAGCAGAGAAACTTAAAAAAAA ACTTTTAAAATAAAGCTCTTTCTGAAATCTCTTGACCATAAAAAAGACTT GTAAACTACCACTCGAGGCTCACACAACAACAACAAAATGCCAACAAAAT CTTCATTCCTTTTAAAGAATCTTTTCAAGGAATTCTCATCAACCATCAAG GAATTTTTCTCGTTTCAGCATGCGAGCAGTGCAACAGGACACACAAAGAT TATTAAGTCGTCCTCGTGTCGGCGAAGAAAATAAGAATTTCAACACTTTT GGTTACACCAATATGCTGTAAGTTTTTGTGTCCAAAATCGTTCCCAGTCC TTATTAGCAACTTTCACAAAAGGCGCATTGTATCTAGTCTGAATTGGGAC AATACTCAATTAGGCTATCCCCTGAATCGCAGACCTCTACAAAACTGCAG GAAGAATAAGGAGCACGAATCCGTCATTGGATGCCAACAATTATACCGAT GTATGTCCATCAGTAAAATTGTAAAATTGAAAAGTGAGATGAGAGAGTCT CACTTCACTGTACAGCATCCTATCTAAACACCCCTGTTGCGATCGTAATC ATATCTCCGTACCCCCTGTCTCACCCTCTACATCGCTAGACTTACATTCC TATTTCATGCTTCTTTTTCACACCCCTGTTTCAAAACTTTGTCACATAAC CTATTCCAAAGCTTCATTCATCTTATGCCACAAACACGTTGGAAAAATAA GGGCAAAATAATGAAATCATTGAAATATGAAATATGTTGTTTTCCCTACT ACTAAAAAGCAAGAGTTTGACATTTTCATGTATATTCATTCCAAATCCTT TTTCCAGCTCTTCTAACATTCCTGGGTACAGTGGTTGCCGACCTCAATTA TTACCGAATCGTACAAAAGCACAAACGTGTGGCTTTCAATCCATCTCCAG ACTCACCTACAGGTAAGGATGATCAAACTCGAACCCAGTCCTTAGTTCGC TTTTTTATGATTTGTGATAGCGCTCACGATACGAAAAGGTGTATTGTATC ACGTTCGTCAGTAAAATCAAATTTGATGTAAAGTTGGTATGGACGCGAGA TTGACCTAAGTGTAATTTTAACTAGATTGCCTTTGCCGATCGGTGTGGAT GTGTCGCTTTAGCGGCATCTTATCACCATTGGAACTACAAACTCGATCCC AGTCCAGTTCGCTTTTTCATGATTTCTAATAGCGCTCACGATTATCACGC TCATCAGCAAAATAAAATTAAGAAAGTGTCAAGTAGCTCTGTAAATAGAC GATGATTGGTTTTCGTAACCTTTCTAGACAAAAAAATTCACAGCGCTCCA AAATTCAATTTCTGACTTCTGAGAACGAGTTTTTAAATATCGTTGGGAAG GGTATTAGTTAAAATTTTGTTTTGCGCACGTGTGAATTGTGAAGCACCGA TGTTAGTTGCTCAAAAAACGAACCATTTTACCCATTATCCAATTTCACTT TTAAAGCCAAACACTTTAAATTTTATTTAGGACAATAAAATTTCCCTTCT AACTATTTTTATTTTCTTCTTATAGGGAGCATCCAAAAGTGACGTATCGA CTACCTTCGTACGGCCACCGAGCGCCAATGTCAAGAACTGTCACACTGAC TGAACCTTACAATCCGTTCAATAAAGTTGAACCAGAACTTCTCGTCATTT AAAACAATCTAAAATCTTATGTTTATACTCGATAAAATATTTTCCGAAAT TTAAAATTCAATGTTTAAAATTACACTCCAAAACCATCCCCACTTGAACC TTGGAACAAGGGAATTTCTATCCCCATCGGGATTTTCAATAGGAATTTTA TCCCAAGGGAGGGGGCACTTAGGCAGAATTAGGTACGGGAACGTGCTGCT GATCAGGGTCTCTTTTAGACTCTAGAGATATCTGACAGGGTCCCAAATTT AATAATTTTCAAGATGTGGATCCATCAATCTGACAAGGTCGATTTTTGGT CATTTTGGACAATTTTCAGGGTTAAAATAGGAAATTTTTTGTTCTAAAGG GTCCCAAATTTACCAAAAGAAAGTCAGTGCCCCCCCCCGGTTTTATCCGA ACCAAGGAAAAAAGTTCCACCGGTGCGTAAAAATGGAAAATTAGAGATAA CGAAGATAAACAAAAATGTGAAAGTGCAGTGTAATGGAGTGAATAAAAAA GTTTGAAAATACAAACGTGCTCTAAAATACTAATTTTGAACAAATTCAAT TCTAAATGTGGCATACTCAGCTAAAGAAAGGTCCTAAATACCCTGTCTAT TCTATTTGTGAATTAAAGTGGGCATAAAGTTGGCAGTCTAATGCATTGCT CTCTATTGACATCAATGCAAGGCCATCTTTCAATCTTTTTCAAGCAAAGA TTTTAACTGTCCACTCAAACAATTAGAATAGACAGGGCAAAAAGTCGGCC GACTAAACTAGAGCTAAATTTCTTCACTCCTACATATCATTTTAGCTGAG AACAGGGATATGAACTTATTTAGGGGCTCGACAAGGGGGACGACAGGCAA GAATAACACAATAATTAAAATTTTATCTGACTATTATATGTTATATTAAT AACGATTATTTTTTTTACTTCTCGTAAATTCAATATATACATATATGCAA ACTAATAGTGATTGCCGGCTATTAAAAATGAAGAAAAAATAACGATATTC TCACAAAGTACACATCTTTTTATAAGAACATCCAAATTTTTTGAAGCTTT CGGATGTTCTTAACTTTTTGAGTTTTAAGCCTAAAAATGTTCTTATTTTC ACTATTTTGTGAGTATTTTTGTCCATTTTCCTAAGAAATTGGGTGTTTTA GAGTCCGCGAAGCATTAAAATGTACTTCTTGTTCTTAATATTTTTTATAT CGAAGCCTCATGTTCTTATAAAAAAAACGTGTACGCCATTTCTTGAGAAA GCTTAAAACAACGACCACTTCATATAAAAAAAGGCCGAGAGAATTGAGCT CGGGTACCTGCTAGATGTATTGATGACGTTCCTGGAAAGTTCCGATTATT TTCTTAACTATTGTGATTACATTTAGAACAATCTGCATCTTTGACTATTT CAAAAGCGAATTTCGAATCGTATATCAAATAACAAAGCATATAATATTTT AATAATCTTTTCAAATCCTTGTATTCTTCTCTTGCAGAGCCCCCTCCCAG CGGTTTACGTGATGGAATGATCGAGTTGATGGCTTGATGCCATGATTTAT GATTTCAAAAAGCCTAATGCGTGATGGACAGTAATAAGACTTTTTTAAAT CCGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007488TCONS_00007488Clytia hemisphaericatranscript
TCONS_00007487TCONS_00007487Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007488-proteinTCONS_00007488-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000077supercontigsc0000077:326158..333211 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.17 0.18 0.1 0.32 14.68 9.85 24.46 23.56 20.86 24.7 18.32 31.85 0.58 0.67 0.38 0.28 0.41 0.5 1.12 0.89 2.45 2.95 1.03 1.23 2.5 3.35 0.7 1.06 0.91 0.58