XLOC_004162 (gene) - C. hemisphaerica

Overview
NameXLOC_004162
Unique NameXLOC_004162
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000076:105217..107360-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004162 ID=XLOC_004162|Name=XLOC_004162|organism=Clytia hemisphaerica|type=gene|length=2144bp|location=Sequence derived from alignment at sc0000076:105217..107360- (Clytia hemisphaerica)
CAATGACGGGCCAGCCCAGCCTACCCACAGTCCCGGCCACGGAGGAGGTC
AAGGACACACCCCGCAATGACGGGCCCTTTATTGAAAGGGAAAACGGAAT
AATTTGGATCCCCAAAGCTGCATAATGCTATCAATTCTAGCCATTGGTAA
CCTCGAAAAAAACTTGTTATTGGTCGTACCTCCTTTACCGTCAACTCTAT
CCGGGCCCTTTCTACTACTTGTTAGCCAGTTGTGGGGTGCCAAAAATAAT
TCCTTGATAACTTGAGAATTCTTGCCTTCGTCTAAGTCTTGACCAGCTAT
CTGTACAGCTGATGCTCTACTTGTGATAATGACTCGATAAAAACATACAC
ACCCTAGGAACCATATAGGAACAAAAAGAACATATAATAGAAAATAAAAT
ATTATCTTATAAATTAATTTGATTTTATACTTAAATCTATCGAAAACGAT
ATGAAATACTTAAACTTATATATAAAATTGACGTGAATCAAGAAATCATT
CTTGCGTCATGATTTATTACTGTTTAACTAGGCCCATACCCCTCTCTAGG
GAAACAATATATGTAAACTNNNNNNNNNNATTTTATACTTAAATCTATCG
AAAACGATATGAAATACTTAAACTTATATATAAAATTGACGTGAATCAAG
AAATCATTCTTCCGTCATGATTTATTACTGTTTAACTAGGCCCATACCCC
TCTCTAAGGAAACAATATATGTAAACTTGCCTTTTGCCATTAAACTAATA
CCCATAAATAAGGAGAGGGCTTGGATACCTGCAAGGGGAAGCAACCATCA
TGGAGGACCCAGACACTGTGAGAAAGATGTCACGTATAGCGCCCTAACCC
CAGTGTCCCCGCCCTACCACGGACCNAGAGGAGGTCTCTGAGGACACACC
CCGCAATGACGGGAAGCCAGCCCTGCCTAACCCCAGACCCGGCCACGGAG
GAGGTCACTGAGGACACACCCCGCAATGACGGGAAGCCAGCCCAGCCCTC
CCACAGAACCTGTGGTGGAGGAGGTCTCTGAGGACACGCCCCGCGCCCAC
GGGGAGCCAGCCCAGCGTACCCACAGACCCGGCCACGGAGGAGGTCACTG
AGGACACACCCCGCAATGACGGGAAGCCAGCCCAGCCCTCCCACAGAACC
TGTGGTGGAGGAGGTCTCTGAGGACACACCCCGCGCCCACGGGGAGCCAG
CCCAGCGTACCCACAGACCCGGCCACGGAGGAGGTCACTGAGGACACACC
CCGCAATGACGGGCCCTTTATTGAAAGGGAAAACGGAATGATTTGGATCC
CCAAAGCTGCATAATGCTAACAATTCTAGCCATTGGTAACTTCGTAAAAC
GTGTTATTAGTAGTGCCTCCTTTACAGAAACTCCAAGCAGGATCTTTTTA
CTAGCCAATTATGGTGCCAAAAGTGATTTCCTGATAACTTCAAAAGTCTT
GCCTTCTTCCCAAGATTTGACCAGCTATCTGTACATCTGATGCTCTACTT
GTGATAAGGACTCGATAAAAAACATACACACCCTAGGAATAATACAGTAA
CTAACAAAAAGAACATATAATAGAAAATTAAATATTATTTTATAAACTAT
TTAGATATTATACCTAAATATATCGCAGACGATATGAAATACTTAATATG
CATTTTAACTTGCCTCTGGTCTGCAACATGAGGCGTCCATACAGCCTTGT
TGACAGGCTATGTAAACCATCCAATCAATGCCGATTGTTTATTATGTACT
GATCACGATCTTTCTTTATGCTTCTATCTAAAACCGGATCATTCTCAACT
TGCCGCTCACTGCAACTAGGATACATAGCCTTCTCCAAATTAACCTTTGT
CAGTCGACTGACAGAGAACTTCCGTAGTTGAGTAATACAATATCTAAATT
AATATAAATGCCGTAGAAACCCACTCTAATTTGACGTGCACTGTCTGTGT
ACAACCTTGCCTAGGTTGACACCAGCCTTCAAGCCAAGAAGATCACTCTG
CTGTAAAAATTTTTCAATTAACCGGGTCGCAGATGTTTGGTAACGTGAAA
TAAAATAAAATATTCCGGTTTTGTGTTTGATTATTACATCGAGTTGAGGA
TAAGTTTATGCTTATAAAAAGTTGAAAAATTTGTTTGTAAACTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007397TCONS_00007397Clytia hemisphaericatranscript
TCONS_00007396TCONS_00007396Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000076supercontigsc0000076:105217..107360 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.31	0	0.23	0.4	0.23	0.19	0.3	0.26	0.73	1.45	3.41	1.52	1.89	2.87	1.36	3.51	3.47	3.7	1.57	1.64	2.44	1.1	0.99	0.93	0.97	1.43	1.33	1.62	0.11	0.28