XLOC_004028 (gene) - C. hemisphaerica

Overview
NameXLOC_004028
Unique NameXLOC_004028
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000074:155496..159250-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004028 ID=XLOC_004028|Name=XLOC_004028|organism=Clytia hemisphaerica|type=gene|length=3755bp|location=Sequence derived from alignment at sc0000074:155496..159250- (Clytia hemisphaerica)
ATTTGATGAAGAAATCTTAGCTTAGTACTCATACAACGAAGGTTGGAGAG
ACTGACCGGTATTACGGTATTTGATGTAAAATGAGCATTCTATTGGTAAT
GCCAAATTTCCGGAATTCCGGGTACTCGTCGGAACATTTCTGACTAAGTA
CTTTTAACATCGGAAACCCCTCACTATCATTTCATTAGCCCGTCAAAAAC
CTTTAAAATTCAAAACCAAAAATGGTAGAGTTAGAACAATGTACTTCGAG
TTCATTATCAACATTTTTGTACTTTCTCATCAGTTAGTTAGAAATTTTGA
AAAATCAAAATGGTAGACATACAACAATGCATTGTACTCCTCCTTTTGGT
CGGAACATGTTCTTGCACTTCAACGTTGAGTATTATGATCGAGCGTGGCC
AAGATGAATGCTTTTATATTTCCAAAGCCTCTGGTGAAACCATCACTGCA
TCTTTCCAGGTAAGGCATGGGTCTGGAAACAAGAAAAGTTTAGCTTATTC
AACCATTTAATTTACGACCTAGAATCAAGTCTCACATCTTTATACATAAA
TAAGAAAGGGGTAAAAACCCTCCAAGAAGGGTAAAGCCCTTAAATTACAA
CACCTTTGTTGCCTTCTCAGCCCAGGCTAGAAAAACGGAACCTCGTAAGA
ATCGACCAGTGACACCTTTCATTATGCCTTATCTCCATAAGGCAGATTCG
TTGTCACAAACATGTTTCAATATTCAGCTAACGTATTATATAACATCCAA
TGATACAAAATGCTAGCTTTTAAATCATTTTGCTCCATTCCCTTATATTT
AGGTTATGCACGGTGATTCAGTGGACTTTACACTACTCGATCCGAAGCGT
GAAATCATCTACGAAAATCGTGATTCTGATGGCTACGAGCTTGAACAACA
AATTCACATTGGAGGTAGGATACTCACAACCTAGCTAATACCCGTTTTTG
AATAACGGATACTTTCTTGTTGTGCCTCTCGAGAAAATATCTTTCATATG
AGGACAAGCGTAGGGCATCAGTCGAGACATGATCATAAACTATTTTTAAT
CTATTTAATTTTTCAAAAATCCCGCCCTCCTCATTTCATAATAAATTAAT
ACCTTGAAATTTCCTTACTTTTCTTTCATCCCTTTCATAGTCTGAGAAAA
TGACGAAGCTTTCTTGAAACACTCTCACTAGCCCAGTTAAAAATGAGTTG
CAATTTTACAATTTCCAAGATTTTTTACTGCCTTGCACTAAAAGTTCAGC
CCAAAAATGTGTAAAGTACCTCAGCAATAATCAAACTCCGAATAATTTTG
GGTCACACTAGTTGCTAATTTGTCGCAAAGCCTAATTGAGCAACATTACA
GTACTAACAACTTCATATTTCTTTTTCAGGTGACTATGGTTTCTGTTTCG
CCAATAGCGCGCGTTACCCAACAGGCGTCCACTTCGAATATGACTTCCAT
TTGGGTTCCCCTGAAGAAGCACAGTTCAAAAAGAAACTTGATGAAGAAAA
ACGAAGATTCTTAATGAACAAAATTAAAGGTAACTTTGTCGTCGGTTTTA
AGTTCTTTTATATAAGGACGCGAAGCTAAAGTTAGGCGAAAACCAAGGAA
TAAGTTAGAGCATCTAGTCGTCAGCCAAGATATAATGACTCTTAAAGCAA
GTATTGTAATGCGATTCTAATATTTAGGTACTCGGTGTATATGGAATAGG
TTTTGCCATTTTGAGAGGATAATATAACATTGCAATCCCTCACACCCTCT
TCAATTTTAAGCCTAAAAATGTTTTTAAAACTAAAAGTTTCCATGTTTAC
GAATTTGTGAGTATTTTTGTGCGATTTCTTAAGAAATTTAATATTTTGAA
GTCTGCGAAATCTTAACATTTGACAATTGAAGCCTAATTTCCTTATATCG
TCTGTTCCTATAAAAAACGTGTTTGGTTGAAACTTATGAATTTTGTTTGA
TTGAATAGAGAACCAACCGAAGGTGATTGGAGGACATGGAGCAGAAGGTG
TTAAACCTGTCGAAATGCACCATGGTGGCCACAAACTACAACCTGATGAA
TTAGAAATGGACGCTTTAGCTGTAAGTGAAATCAATGGCCTGTTTGCTCC
CCTTCGAAAGTCCTTGCTGAGAAGAATGCCCAGAGATTTCAATTCATTGA
AAAACTTTACTTTAATTCGGTCCATAACTTAGGAATGATATTGAAATCTT
AAGAATGCCCATTGTAGTAAGCAATAGATTTTGAAATCAACAACCATTGA
AAACATGTGATTCTCCGTACTCATTCCTGGCATTAGAACTGGTTAAATAA
TTCTCACCGGGTCAAAAAGTCGGTTGACGTTAATGTAATGGCTATTGAAT
TCAAGCACACCCCTGTCCCATTCGCATTGACTCAGTGAGAATTCTTTAAC
CAATGGAGATGTGGAGAATGATTGTCTAAGGAACCAATGGGGACGGAAAA
ATCTCCTGACGGTGACTATTATTTTTGACCAAATTTTCAGGTTGGTAAAG
GGTTCCACTGAGTCTGTCACGGGAATGTGTAAGCCCTGTTTATGCTTTTG
AGAGCGTCTAATGGATAATGGTTATTATTCTTATATCTAAACTTTTTTCT
TTTATTTTCAGCACGCCATGCTTCTAATCTCCTTCAATGCCGACCGTATG
GAACATTTCATGAACCAACACAAATCCAAACAAGCTTTCTCACATAATGT
TCAAATGAAGAATGCTGAATGGATCAATTATTATTCGGTGACGGTCATCA
CTTTAGTGATTATCATGTCTTTAGTTCAAGTCATTGTCGTCAAAAGTTTT
TTCAGTGGAAAAATCAACTTCAAAGTTTGGGAATTCTAAACGGACAATTA
TTAAGTAGTTTTTGATAATAATTTTATTCATTTTATGAATTAAAGTCATT
TTTAATGTATCTATTTTTTAAAGTCAAACCAATAAGTCTGCGACCGCAGT
CGGAGGTGACGCGAAGGCTCCTCTTTCGATAGCTATCTACCCAAAGATAG
AGAATAAGGGCACCACTCTTTCTCCTGGATCCTTCTCTAAATCTTCCTTA
CCAGCCTTTCATGTGTTAAAATTAGAGTACATAATTTTCAGACTATTTGC
TTCACAAAAAATTGACAAAAGAGTGCTGACACAAAGAATTTGTTCTAAAT
ATGGCTTCTTTTGCCTCAGGTTTCTAAGAGAACACCAATCCCAAGGGCTT
TCAAAGCTGAAAACATTCATTTTTCTCTTATTTTTATTTTTCTCCAATAA
TTTTGTTATAAACCTAAATTTGCTTCATTCAGTATAACCAGTTTTATTTA
TTAGGTATTTTTATAATTTTTGATGAATGATTAATGCCATGCAAAGTAAT
GTTCGATAAAAATCAAGAAAACAAAAATTTGTTCAATTTATTGTAAAAGC
TTTTCGACTATCGTCATCGTCAGTACAGTAAAAAATACATAAGCATATGA
AAAAGTATCTACAATTTATAAAGAAATGTTAATAATAATCTTTATAATTT
TTATAATGTACTTTTAGCTATTTCTCAACTAAATTTCCAAATATCATTAA
TTTTTTTCCTAATTTCATAAAAATGATTTTTGATTATCGTAAATAAAACC
AACGAATGCTTCCTGGTTTTTCTAGACCAGACTCTCCTTGAATAGTGTGT
GAATTGTGTTTTTACATTTCTATCGAAAAGGGGAGTCATGATGAAATTGA
GCATTTAGTGAATTTTTTCAAACCCATACATATTCTCTTAAACGAAATTT
CTGCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007182TCONS_00007182Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007182-proteinTCONS_00007182-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000074supercontigsc0000074:155496..159250 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.64	0.67	0.43	0.43	85.08	67.34	196.35	212.37	99.88	127.48	31.84	47.84	13.02	10.42	18.31	15.46	6.2	5.73	0.38	0.38	0.24	0.21	0.87	0.6	0.13	0.17	0.46	0.38	0.5	0.44