XLOC_003947 (gene) - C. hemisphaerica

Overview


Name	XLOC_003947
Unique Name	XLOC_003947
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000073:67459..77340-

gene from alignment at sc0000073:67459..77340-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_003947 ID=XLOC_003947|Name=XLOC_003947|organism=Clytia hemisphaerica|type=gene|length=9882bp|location=Sequence derived from alignment at sc0000073:67459..77340- (Clytia hemisphaerica)
AAGTAAAGAATCTTCAAAGTATTTATACCATTAGTGACTATGGATTAGGT
AGAAGAGTTTTTGTTTCTTTTTATCTTTTTTCTACTTGTAATGTCAGCTT
GTGAGCTTCTGAGAGGACAGACAGGATGCAGGTGAAGGGCCTGGGGATGG
AGAAGAATCGTTTTTTTTTAATAGACAGACTAGTCTTTTTACCTTAAATT
GTCTAAATAAAGCCCTAAACTGCTGCAATTATCTGATCCTTCAAATGTTT
ATTGTAAAACCTTCTAAATAAGCTGTTTAATAAAATCGCTTTAACTACTG
ATAACTACTTTGCAGACCAGAAAGTCTATGGCGGAAATAGACAGCTATAT
TCGACAACCGCACAACCGCCAAAAGGACCCTGTCGACGCACCGGACTCCG
GTGTATTTGTCCGGTGGCAAAAAGTATCCTTTCGCTACACCGGACGCAAT
AAGTCTGGTGTCAGTTCGGTGTTGCATACAGGGAATTTTGGACGCCGGAC
ATTTATGAAAAAAAAAATTAAGAAACACCGGACCCACCGGACTGGCCATG
TCCGGTGTTTTGATTGTCCGGTGGGAAAAATATCCTTCTCCGACACCGGA
CATCCGACCTCCTTAAGTCCGGTGTAGAAATTGTCCGGTGGTAAAAAAAA
TTCTCATTTTACATCAGACTTTCGCGTGTCCGGTGTTCGTTAAGTCCGGT
GCGTCGGCAGGGTCCTCCGCCAAAGCTTTGCTACAAAAAATTCAAAGTGG
AGTATTTTTTAGGTAAAAAATCCTTGAAATCCAGCATTTCCCTGGGGGGT
CTTTGATTAGCATTAAAACGAAAAATGCATAAAAGTGGCATTTTTTGCCC
ATTTTAAGGCTAAGAAAGGTCAGGAAAGGGTCAAAATGGTTTTTAAATGC
AACATAAAAAGACAAAATAATCCCATTAGCAGGTCACTCAATGTTGTTTC
AATTTTAGGCTAAAAAGGCTAATCTTCTCTGACTCTGAGTAGCAAAATGC
ATGAAAGCATCATCTTTGAGGTTTTGGCTAATATCTCAAAAGATTCATCT
AGGAGGAATGAAAAGAAGTTTGTGATTAAAAGGAGTTCTTTACCTACCAT
TTCTCTGCTTAGTTTCCTTACTTTTCCTAATTTTACCTATACCGTTTTTT
TACGGGGAGAGTGAAGTTTCCTGCAGTCCCTAAAATCAAAACAATGGAAA
ATTGTTTGGACGCGTGCGCAGTCGACACTACTAAACTGTGTACACATTGT
TTTTTTTTAAGAAACACACTTTTAAGAAACATGAGGCTCAGAATGCCTAA
AAACTAAGAAACATAAGAAACATGCTGAGGCTGAGAATGAAAAATGAGCA
TTTTTTAATTCGTTTTTTAAGAACCTTTCAATCAAGGTTCCAGAAATATA
CATATATAACAGTTAGAAACACTTGAGAAAGTCAGAAAATCAATATATAT
AGAAGATAGGAAAGTAGCGTAGATTAGTCAATTAGACTATTGTATTATCG
ACATGCGCCCTTTAAGCTTGACAAGGTTTAGAAACATGTAAGAAACATTT
AAGGCTCAAAAGGCCGATTTCTTAAGAAACATTGAGGCTGCTTGGTAAAA
CCAGTTTCTTAAAAAAAAAATGTTTATTCAGAAGGGAAATTCCCTATGTG
ATTCCTTATTGACTCCCTTTGGAGCAAAGCTATTACCTTCTTTTAACAGG
GAGGAAAAAAGCCTCAACACTGCATGAGAGGATATTGGCTGATATATTTA
CAACACTGAAGTCTCATCCCGCAAATTCTATGTAAAAGTTATGAAAATGA
AAATGTGCCAAGTTGTTGTTACCTTATTGGCCCATTTTACACCAGTTGTT
TTTGAGTATGAAGTGGATTTTTAAAAGGCTAAAAAGTAAAACTGGTCAAA
TTTATGGACTTTTATTTCATTTTTGATATAAAAGTCCGTTAGAACCAGAA
GATAATTGTGTGTTGTGTTGTGTGCTCTTGAAATTTCTCCGCGATCCTAA
TTTAACAAGGTTGAATTTCTTGTGTAGGACGTAAGTGACCTAGCCCATGT
TGATGAAAGGAGCTATGGGAGTGTTTTGATTGACTAGTAAGAAATAGAAC
CTTGTTGTACTGGTTATATTAAGAATAAACTTTGATAGTAAATGAATTCT
ATAAAACCTTTTGGCACTGAAAAACAGTCAGCCGANATGTTAGGGGACCT
AGCACAAGACAATTTTTTTGGGGGAGCTAAATTGTTGGGGGGACCTTACT
TTGTTGGGGGGAGCTAGAAACCTGGCTGAAGCTATGTATACATAATATGT
GTATCAACTTCAAAAATAAAAACATTACTCGGCCTATTGAAGTAAGTCAT
TATGTTAATACATAATACATAATACATTTGTGCTGAAACCTCTTCTAGAT
ATCAAATTGAAAAGGAGACTTTACTGTAAAGTAAAAAAAGTAATAGAAGG
TTGGAAAAAACTGGAAAAGACAGATTGACCCCCTCCCCCAGTATGTAGGC
TTTCAAACATTTTCCCAAAGACCCCCCCCCCCCCCCNNNNNNNNNNNNNN
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GAGAGGATATTGGCTGATATATTTACAACACTGAAGTCTCATCCCGCAAA
TTCTATGTAAAAGTTATGAAAATGAAAATGTGCCAAGTTGTTGTTACCTT
ATTGGCCCATTTTACACCAGTTGTTTTTGAGTATGAAGTGGATTTTTAAA
AGGCTAAAAAGTAAAACTGGTCAAATTTATGGACTTTTATTTCATTTTTG
ATATAAAAGTCCGTTAGAACCAGAAGATAATTGTGTGTTGTGTTGTGTGC
TCTTGAAATTTCTCCGCGATCCTAATTTAACAAGGTTGAATTTCTTGTGT
AGGACGTAAGTGACCTAGCCCATGTTGATGAAAGGAGCTATGGGAGTGTT
TTGATTGACTAGTAAGAAATAGAACCTTGTTGTACTGGTTATATTAAGAA
TAAACTTTGATAGTAAATGAATTCTATAAAACCTTTTGGCACTGAAAAAC
AGTCAGCCGATCAGAATGCTTTATTTGCTCAATTGAAAATCAAGTAATCA
GATAGAGTTGAAACCTTGTTGAATTAGGTGATGATTTGATAGACCAAAAA
ATCGACAAATTTTCATAAGGGACCATTAAAAAATATGTATGTTTTATATT
GGCAAAATGCAACCCCACCCCTTGTATGCTCTTGTATGCATTGATGGTAG
CCCTCTTCCTTTGCATATGCTCTTTTTCAATTACTCCACCCTCAACAAAA
TTATTTTCACTTTCAGGAATGGTGTTCCTAAAAGGTAGGGTACCCCAATC
GGGGCCCCAATTGGGCTACCTATTGGGGTACTCATTGATTTACAGACCAA
AATTAAATATTAACCAAAAATTTGTGGAGGAAAGTCATCTTCTAGGCCAG
AAGTTATGAATCTAAAAAATATTTCAATTAATATTGCATAATGCAGAAGA
TAGTTAAAGATACATAATTCATTTTGTCAAAGCACATGATGTATAATAGA
GCTTTGTGACGGGGTTCGTATATACATATACCATAGGTTCAGCCCCCCCC
TTATTTTTGGGGGGGGGGCTAAGAAATATTTTGGCCTTTAAAGAGCCTGG
GGGCTAAAATTACCAAAATATTTGGGGGGACCTAGATTGTTGGGGGGNNN
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CTTTTTGAATTGTCTCCAGGTTGTCTCTACTCCATGTAAAAAGCATTGTA
TCTTATATAGTTGTCCCTGTTATCTACACGGTCTAGGTGTTAGCTTTGGC
GATTTTGATGCATCCTTCATGTTATCCCAAATCCAATTTTACAATTTCAA
GAATTAGTCCACTTTCATTTTTCATTTGAAACATCCTTTTATGTCATGGT
ATATTTCTGTCTACCATTCCTTGGCTAAGGTTTACTTAGGGCTGATAAAC
ATAAGTATTTCACCCCTGTTTGAAAAGTCATCATTACTTTGCTTATTTTG
TGGGTTATTGTCGATTTCGAAAGATCAATACATAAGGTAACTGGACATAT
TCTTCTAAAATCTCCCCTAAAGGGCCCTACCATTTCTTCAGAAGTTAATT
AAAAATTTTTTGCACCGGCATGCGCAGAATGGATGATCTGTTCTGAGACG
AAACTGATGTAGCATTTCTTTTATATCATTCTGTTTTTAAAGAAATAATT
TTTGGGGACACAAAATTTTGTAAAATTTAGTTTGTACCAAGATATACTTT
TTATGCCATCCCTTAAATCAAATGTAATTTATTTAAGTATTTCCCAAATT
TGTGCTATTCCAGGCCTTGATTACAGTAAAACAGGGTTTTCGGCTTAGTA
TATTAATTTTGCAAAAATTTCCCAAAACCAACTAATTAAAACTCTGCCGA
ATACTTATTTCAACTCATCTGCCAAATTAACTTTTGGGGTACTAGAAGTA
AATTTTTCTATACCTGATCTGATCTTGCAAAGAAATTCATAAGGTTATTT
CTCAAAAAAAATACTATTTGATTATTTCTTATTGATTTTATTAACTGAAT
TTGAATTTGAAGCGTTGTTTTGGTGGTTGAACTCTTGATTTCGATGTTCA
TTATTTTCTTGGTATGATTAGTCAGCCTAGAGATTTTCTGGTTTGCCACC
GTTCTGGCAAAAATAATCCTCTTAACAGAAGGAAACAATGTTTGTCTTGA
ACCTAATTAATGAGAGCTCAAATCCTTATCATTAGATTGATGAAATGTCA
AACAAATCAGGATGTTTAGTTTCTATAGTGATACCTGTCCATAATGGTAG
CGCATTTATTGAGGAAGCTTTGGAATCAATCCTTAAACAAAGTTGGAAAG
AATCTCTTGAAGTATCTATATTTGACGATTGCAGTACAGATGATTCTTAC
AAGAAACTTTTAACGTGGAAAGATAAGTTCGAAAATAATGGAATACACGT
TGTTTTGAGTCAGAGTCAAAATAATGAAGCAGGTGGAGTTGGGTTTGCCA
AAAACTGTGCAATTTCACAATCGTCTGGCAATTTCATTTGCTTTCTTGAT
ATTGATGATGTAATGCACGAGAAACGTATTGAACTTCAATTATCAAAAGC
CAAAGAAGATACAAACTTGATTGTTGGGTCTGGTTATGTTCGATTGCCAG
AAGGTTCAACTGTGCGTTATACAGAATGGAGCAATTCATTAGCAGATTCC
CAGTTACACACACAGATATATACCTCGTTTGGTCCCACTATAATCAACCC
AACTTGGTTTTGTTCCCGTGACATTTTCAAGAATACCGGTTATTTTAAAG
AGGTTCAAAAAGGATTTCCTGAAGATCTTGAATTCTTTTATCGACATTTA
GATAATAATGGGAAACTAGCGCTTGTCAAGAAACCTTTGCTGACTTATAG
GTATCATTCAGCAGGGGCTACATTTTCAGTTCATGAAGATACAATATGGG
ACTTGCGAATGAAACAAATACAAAAGAACGTCATATCAAAATGGGGCAAT
TTCACTATTTGGAATGCTGGTAAACAAGGCCGTAAATTTTATCGCTCCCT
TGGTCCGGAGAATCGTGAAAAAGTATTATGTATGTGCGATGTGGATGAGA
AAAAGATACAAAAAGGAGTCTATACATGTGAAATGATTAAAGGTGCCGAT
GGAAAACCATTGAAAGTTCCAATAGTTCATTTCAAAGATGCTAGAAAACC
ATTCATTATTTGTGTCAAGCTGGGAATGTCGAATGGAGTATTTGAAGATA
ATTTGTCTTCTCTTTGTTTGGAAGAAGGAAAAGATTTCTTTCATTTTAAT
TGAAGATATAATTTCTCAATAGATGATTTTAGTTCTTATCCAGGAATTTC
CATCAGTGTTTTGTAATATAATTTTGTAATGGGATGATTTTATTATATAT
CATTTCATCTTTCTTTCTTTTTTTCTCGTAATGTTTAATCAATTTCGAGG
AACTGAACTTGTCATGGTCTAATTTGTATCATTGGGAATTTTGGCTAAAT
TAAGTTATCAATTCAAAATGTCTATGTCTTTG

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00007060	TCONS_00007060	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00007060-protein	TCONS_00007060-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000073	supercontig	sc0000073:67459..77340 -

Orthologs

The following orthologs are found for this feature:


Ortholog Name	Description	Organism
B3GNTL1	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like protein 1	Homo Sapiens

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.43	12.58	7.36	6.12	11.75	8.15	7.43	8.23	5.74	4.3	4.87	3.1	4.11	3.39	4.77	6.11	5.3	5.65	2.66	2.5	4.77	3.8	12.28	11.26	5.83	6.25	4.07	3.02	6.41	6.99

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XLOC_003947 (gene) - C. hemisphaerica