XLOC_003892 (gene) - C. hemisphaerica

Overview
NameXLOC_003892
Unique NameXLOC_003892
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000072:668917..678476-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003892 ID=XLOC_003892|Name=XLOC_003892|organism=Clytia hemisphaerica|type=gene|length=9560bp|location=Sequence derived from alignment at sc0000072:668917..678476- (Clytia hemisphaerica)
AGGGGGGGGGGGGGGGGGGGCAGTGGGTTTACCAACTGACGGTATGTGCG
GCGAAAAAATTGGCTTTTAGAATCGCATCGAATCCGCGAGTTATCTAGCT
GTAATTTAGATAAAAATCTGCTTACCCCATCCAGATTCGAACATAAACTC
TTTCATCGCAATCAGGTGCTTGGTCCCAGACCTCAAAAACTTTCCATCTT
AATCTAATAAATGTTCCTGGTTGTGTTTTAATATTGTATGTGGATGTATC
ATTTGCACGAAATTTTTCTGGATATTGAGGTGATTGAAATTCACCGGTTG
TGTTTGTTAGAGTAACATTTAATGATACAGCGTCGGTGAAATAGATTGTG
TTTAGTAAGAGAATCAATAAGGCAATTCCATTTTGTATTTCATTCATTGT
TTAGTCACTAAAATGAAAAAATATATATTCATGAAGGTCCATGATAATTC
TCCTGGTCTGAATACCAGCTGCAGATCTGGGGAGGGTTAAAAACTACCTT
AAGAGAAGAAATTTTGACGAGAAGAAATTTTGGCGAATGGAGCCCATTTT
TGTTCAATATTTTGGCTGAAAAAAGAGGGAGGAAAGGGTTTGTAGGAGAA
ATAGAGACCAAATTGTAAAAAAAAATTAAATTTGTTGACAATTTATTTTG
GCGAAATCTTTAGGCAATTCGCCAAATTCGCCAAAATTTCTTCCTTTAAC
CTAAACACCAGCGTGTCTCAAAATGTCAAAACACGTCTCCCTAGAATCTA
AGGTCCATGTAACGTTTAAACAACGTTTGATGCCAGCCGGGATGGTGATA
GTTTTCCACACACCCATTACCACAATATTCCCCTCTTAGAACCTTAGAAT
CAGCACTGTATTAACCATAATTTTGATTACCGGACTTTTCCCCGACTGGC
TTTTCCCCGATTGACGTTTCCCCAACAGGCATTTCCCCGGCGCACAGAAA
TGCCCGTCGGGGAAACTTCCAGTTACCAAAATCTCTATTCGTTGAGCCAC
AGAGTTAGTAAACAGCTATGAAAAAAAGGATTTCTAAGAATAGTTGTAGA
AATTCTAAATAAAAACTTTTCAAAAGAAGCTTTAGTAGGGTGTAAATTTT
GATGGTTATTTTTGGTTGAAGTGGTTGAAGGTTTAGGTTGAGAAATTAAA
GAATTACAAACCCCACAAAACGGATCAAGAATAATATATTAGTCAGACAT
ACAAAATTACAAATAAATACAAAATCATATTTTCCAAAAAATAGAGTTTC
TAATATTGTACAAAATTAAATGAAAATATTTTCAAGTTTTTAACTTGTTT
TTAAAATGTTGCTGTAAGAATCTTCAATCCTTGATATCAAGGATATTACC
GTTGTTTATAAATTATGATATGGCTACGTTCATACAGTGGAGTCCCAACT
GGCACACAACGTTGTTTCATTTCATTTAACGTTATATGGACGTTATGAAC
ATTAGATAAACGTTGAAACAACGTTGTGTGCCAGCTGGGGTCTCCATAAA
ATAACTTGTTCGAGTTTAGGAAATTTGTTTATTAGGCTTTAGTAAAGAAA
GGGACCATAAAACTTTTTCGCGTTAAGGAGACATTTAAGCTATAGAGGTT
CGAATAAAAGCTCTATTGTATTATTAAATGATCATTAACAGGCCTACCAT
GAGTATCGCAGTACAGGGTGTCCCGAAAAAAAGTATCGAGTCGAACCACT
TTTATAGAAAGAAAGTTCCTGTGTGCGTTTCACTACATTTGCAATGTTTA
TCAAAGTTTCTCTCTGTGTCATATTAATTGTCATGAAACATCTTTTATGA
ATAACTTCTACAAAAAAACAATTCTCAATGAAAATTCTTCTTTTTAATCA
TAATGACTGTTGTAAAAACAATTATTTTGGTTATATTTTCTTACATTTTG
TGAAAGACACGCAACAATCTTCTACTCAGAATCATGTTCGAACTCGATAC
TTTTTTTCGGGACACCCTGTACATGAAGATTACACTGTGGTGAAAGATCG
CCATTCCACTCAGCGCCCATTCAATGAGAAAAAAGCAACCATGACAATCA
TCCATGAACTTGGACATTGGTCTAACCATTCAAACCAAACTTAACAAACG
TAGAAAATATGAAAAGAGTAATGTTCCACGCACTCTTGAGTCAGAGAAGA
TTCATTTCATTCATTAATATTCAATGTGCCAGAGGAATGGACCTTATCGG
AGTTTTTGATTTTCCTAAAAAATACATGCATTGTGGGATCGTTTCGAGGG
TATAACAATAGAAATCTTTTTGGAATTCCTCGAGGGAATTCTATTGTAAT
CAACCAGAAACAATCCCACAATACATCGCTTTTTTTAAAAAATCAAAAAC
TCCGATAAGATCTATTGTAAAAAAAAAAAAGATGTTCCCATCGAAACTTC
GCCTTACATAAATCCAACCTTTCGTTCCGTATCTACTCCTCCCATCGAGT
CATTATAGGAGGGTGGAAACGGGGGCGGTCCATCTCCAGGGGCGGTTGGT
GATTGTGGTGGTGCAGAGGGCGATTGGTAAGGGGCGGAGGCTGAATGTTG
AGTTGGTGGTGTTGCACCCATAGGAGGTGGAGATTGTTCAAATGATGAAT
AATTCTTGTATGTAGGTGGTTGGTATGGAGAAGGATTCTCACTTTGTGGA
GCAGTGTAGCCTGATAAAAAAGAATTCAAAAACTATTTTAAACCGTCATT
TTGGGATCGACTATGCAAAGTTAATGTGAAGCCATGAGGCATTAATTCCT
GTAGCGTAGCCAAGAGGGGCGCAAAATTTGTGTTGGAGAGCAGATTTTTA
TGACACTGTAATTATCTATTCATTTTAATAAAAAAATAATTATAAAGTCA
TAAAAATCTGCTCTCCTACACAAATTTTGCGCCCCTCTTGGCTACGCTAC
TGTTAATTCAAGAAAAACAAAAACTTGGGGGAGGGGCTTTCTTGTTCAGA
ATAGATATTCCACATTGAGTTATGTGTAGAAAGCTAAGATATCAGAGAAG
ATATTTATATTCGTACTATGAATCTCAGTATTTGTCAAAGTAAAGATGCA
GTACAATACCGGCCATAATATTTGAGAAAAAACGGAAATCCCAACCGGAA
TCTTATAGCCACAATCGATTTGGAAGCACTCAATTTAGGTTGGAAGGGTA
GAGTTTTAACACTTACTTACGACCTTGGGATCTCAGGATCCAAAAGTTCA
AGAACGGTCCAATAGGAATATGCCTGGAAGTCTATAAACCCCACCCGAAC
TTAAATATTCGATTACATCTAACCAATGGCCCAAAAGCGATATTCTCGCC
CGAGCTTTAAAATGCTAAAAACGAGGAATTAACCAAAATTCCCAATATAT
ATTGACCGATATTATAGATATAGTGAATTCTCTATATCTCGAACACGCAC
GGGGGTCACAAATTTGTTTGAGTTAAGGAAATTTCATTGTTAACTGAAGG
GATCATAAAACTTGATGTAGTAAAGGAAACTTTTCGAGTTATTGTGGTTC
GAGTTAAAGAGACTCAACTATAGTACTTTACTTTAATTGCATTAATTTTC
GCGGATGACACTATTGTGTGACAATATTTTCACGATCTTTCCTTGCGTTT
TACTGTCAAATCATTCATGTTGGTTGTTGAAATACGCATTATTAGCGTCT
CTGTGGTGTCTGAGTAAGCATTTCTTTCCCAAATTTCCATTGGGACTCAA
TTTCGCGCATGACACCCAAATCCGCGAAATCCGCGAAATTTAATCCCCCT
AAAATTTATCTCATAAAAGTACTTACTAGCAACGACGATTCCCGGTGGAT
TAAAGGCTGGTGAAACAGTCTCCGGCTCGTCTTGTTTGATCATATTATCT
TTCACTCCATAACAACAGTTCAAACAATTCCATCTTGCTTTTTTACATTT
CCATTTAAACCATCTTCGTTTTATATATATGATGAATAATGTTACGACTC
CTAAGATGACCAGAAAGACAATCCAACCTGTCGCCAGACCACCACTTTCC
TCATCTTTTTCAGCATCCGCCGCGGCCGCTGAATCTATGAAAAATAAACA
TGGTTTAGGTCTAAATAGGATTCTATTTATTTCTTCAGACAATACCATCT
TCCGTTAATAAAGCATGAATAAAGGGATAGTGTAAGGGGAAATATATATG
CGCCTAGCTTAACAGCCTCAAGTCGGTATTACTGAAAAATAGCAGCGGTG
GAGTTTGTGACAAACTGTCAAACTACTGGCTGTAATCTCTTTTCGGCAAA
AATACCCTTCTGCGAATTTCGAGCCATACTAATCCCATGTGGAAGGACAA
ATTTGGTATAGCGCTATCACTGTGTCTCGCTAAGACCAAGGACGCTTGTA
TAGCGAAGCTTCGCGATATTCCCGCTTCGATTCACTTCTTTAATATGCGA
GTGCCCACTGAAAATGGTCGTTGGAAATCAAGTGACTGAAAAGTGAAAAA
CTTACTCCATATTGGGAAATAACTGATCATATATCCTTTGTTTCGGTTGT
TCCATTTGACAGGGGTATTCATGGTGATTTCAAGTCGTTTGGTTTTCCAG
TAGATTCTGGTGAACGGCCATTTTTGGGTACTACAAAACCGATAGTATTG
AATTTGTCCTGTTTTCTTCACATCTATAAGATATAAAAAGGAATGTTATG
AAAATATAACTGAAAATAGACAAACAAGTTGGGGTCGTTGCATTTTTCTT
GAATTACCGTGAACACCGGTGGTAAGGAATGCTAAATGTCTTAATTTTTA
TCCTGCGTGTTCCGTTTGACACAGAGTATTATACCGCCACACCGTCAAGC
CTGTACGCCTCCTCCACAAGCTAGATGAGAAATGGAAAAGGTTGGTGAAC
GGCCATTTCTGGGTACTACAAAAAAGTATTGAATCTGTCCTGTTTTCTTT
ACGTCTGAAGAAAGATGTAAAAAAAACAAGAAGCCCGTTGGGCGTGAAGG
CCCAGCGAAAAGTAACGTGTTGAAAACGAGCGTGCAAAACAGCAAATGTA
TGACCATGTTGATCAAAGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTTTAA
GCGCCGTTTCTACCAAAACGGACGGACAGACAGCGGAAGGATGAGGACGG
AAAGTTGCAAATGAAAGGCCCTATCGCTAGCGCTGGGCCAATTATAAAAA
GTGAATGGACATATAGTAGACTGTCACCTATTCGAACTTCTATTATTCAA
ATCTTTCTATAATTTGAACTTATTCTCAATCCCCGCCATGGAGAAATCCT
CATATATACTTTCTATAATGCGAATCTCTCCATAATTCGAACAAAATAAG
ATTCCCGTTTCAGCTCGAATTAGCGAGTCAACTGTATAACTGAAAATAGG
CCAAATCTTGGGATTTCGGATAAGATGAGAAACTCTTAAAAGTTATTTTA
ATCCTTGTTAGAAGTCGCTGCGAGATGAGACTATTAAAATAGCTGCCTAT
GACACTGCAGCTAACGCTACGTTCACTACGTTCGCTTAGCATAGTTCCCG
ATATTGTCATTATTGTTATTATTATCCCGTTTCGATTCACTTCACCACTG
TGCGAGTGCAAAATACGACTGTTCATGGCGCCGCGGAAGCGGGAAGATTG
AGGAGATTTCAGCCTTCCCACTATTGAGTAAATAAGACTTTTTTTCTCAA
CTTCCTAGCGACTTTTATCTCATTTTGAGCCTTCAGCTTCCCCACTTTAG
CGGTTGTTCCAACGAGTCTGTGTCCTATTACTGCGGGATATGATTTTACG
TAGAAAATATTGTTTCCTCGGGGCAAAAATTAGTTGGACAGAACGTGCAA
GGAACGAGGACAGAAGGTTTAAGGCACTAGCGTCTCTTAAACCACTCGGT
CATTGTCTATGTGGGGGATTTTGAATTATTGTAAAGAATAGACCTTTTCA
TAAATTACGTCACGGACATCACTAGCCTCGTATTCAAACAATTTCCATGG
TGATTTTGTCTCCTGAGACATTAAATTATTTTTTTATGAATAGGAAGTAG
TTTTAATAACATCCTCTGGGAGTTAATTACCAAGGCAATAATTTCAAAAC
GAGGTAAGTGATGTTCGTCGCGTAATTTATGGAAAGGTCTATATTTACTT
ACTTTTCATCCTTATATAGTCGTTTTGTTCAACCATACATAATTTGGCAC
CAGAATACGGTGTACTTGTATCGATCTTCGTAAACAAGACTTTAACTCCT
GCAATGTTCTTGTTACCAAAATATAAGGTAAATTTACAATTCCCTTGTCC
GTAATACGGTAACGGATAGTTGGTAGAGTGAATTGATCTACGAGATAGAT
CCATATCTTCGCATTTGGTTGTTTCCAAAGATTGGTTGAACAGGAGTTGT
TTATATTCTGCTACAAATCGACCGCGATTCCATTCTATCAATGAAAAAGA
GACAATATCGTGTTACCTTAGGGGAACTAATTTTGGCGAGTAGCAAAAGT
TGAAAAAAAAATCGGCGAGAACTTATTTTGGCGTGTAACAAAGAATTTCT
TAATTTTGGCGGGAACTAACTTTGGTGAATTTTGTCAAAATCCACCACAC
TCGCCAAAATTATTTCTTTTAGAACCTAGCCTAGTTAACTAAGCCCGCAT
TCACAAGGCTAGGACACACAGCTAATGGCTATATATAGCGTTTTCGGCGC
TTTAAAGAATTTTTATATTTGTGGTTTTCATGTTTGCCTTGGAATACTGT
TATCATGAATTTCATGCTGTTATTCAGCCACAACTAAACAAGCAAACTAG
CTTAGATTTCTAGGCTATAGATACGTTGGCAAAATTTTTAGATAACATCG
AGAAACAACTCATGGGCCTCGTCATGGGCCTCGTCAAACGCCAACTCATT
TTTTTTGAAGAATAATCTCTTTTTAAGTCGAAACCTGTTTTTATCTAATT
GAATAGCGTTTTAATGGTTTAGAAGATGTAAAAACTTGTCAAGTACTGTA
TTCTTCGAAGGTTTATGGCCAAGTTAATCTTTTTATAGTTAAGACAAAAA
AAACTATTGTTATTGAAAAGTTGAATTCTTCGTCGCTTAACCATGGAAGA
GGCGACAATGCTTTCGGCACAAAATTTTGGCTCTCTCACTTCAAACGACT
CACCAGGGCCCAAGCAAAAAACTTACTTGTCATAGTAGAGAGTGTATTAA
ATTCAATTTTCATACAATGATCATTCGAATAGAGATCAGGTGGTATGATA
TTTGAATCGTTCATCGTACAAAATCGTGTCAACATTTTCAAGGATCCAGG
ACATCTATGAAGATTTAAAAAAAATCATTGAATTTAAAGCCCGAGCGGCT
AGAGTAAAATCTCTAACCTTTCTCAGGCAATAAAAAGTGAACCATTTATT
TCCCATCCAGAACGCGCCTAGAATACCCCGCAATCATGACGACGGATTGC
ATCCTCCAAGGGACGCGGATTGTATCCTCCAAGGGACGGAGTAGTCTCTT
TGCTTTTGAGCATTTTATGAAATCTAGCGATAGATTTTACTTTCAATTCG
GCGTTTGTGTAAAAACCATGCGTGGGAGTTTTCTAAGTTTCTCTCTAGCC
CCTTCGGGCCTTTAAACTCGATGATAATAATATCCATGTCTCATGTTTTA
ATCGTTAATCGTGACAACCGTCTCGTTCTCAAATGGAACTTATATATATG
GAAAATATATATTCCAATGGGACGATAATTTTGCCCATTAGTGGGACGTG
TTTAAAAAAGAAATGCAGTTGTATCACTTACCCTATCCAGATTCGAACAT
AAACATTATTACAATCAGGTGCTTGGTCCCAGACCTCAAACACTTTCCAT
CTTAATCGGATAAATGTTCCAGGTTGTGTTATAATGTTGTACGTTGATGT
ATCTTGTGCAAGATAATTATTAGGATATCGTGGCGATTGAAATTCACCGG
TCGAGTTTGTTAGAGTGACGTCAAACGAAACTGCGTCGGTGAATTGTATT
GTATTTAGTATGAGAATAAATACATTGATTCCATGTTGTAGATTTTTCAT
AATTTTTTCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006971TCONS_00006971Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000072supercontigsc0000072:668917..678476 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.42	23.64	18.34	14.6	10.04	7.06	4.19	4.44	15.98	13.36	15.79	9.5	7.53	9.26	3.85	2.67	14.48	17.5	12.65	18.49	9.97	13.41	12.57	14.45	0	0.28	3.97	3.2	6.09	8.13