XLOC_003793 (gene) - C. hemisphaerica

Overview
NameXLOC_003793
Unique NameXLOC_003793
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000070:326421..336596-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003793 ID=XLOC_003793|Name=XLOC_003793|organism=Clytia hemisphaerica|type=gene|length=10176bp|location=Sequence derived from alignment at sc0000070:326421..336596- (Clytia hemisphaerica)
TACCTGCCAACTACTTTTGCGAACAATTGCAATGCCTCGTTGCAAAACTC
CAAATCTTTTTCAAACTCATGCTTTCTTTTAGCAGCAACAAGTATTTCGC
CAACATAATATAGAACATCCTCGAAATAAGACACAATAATTGAAAGTCCA
TCGATATCAAGTGCTGTACGGAATTTATAGTTAAAAGTGCAAACCAAACG
ATCCAATTTTCGGATGAATACATCAATGGATTTTATTTGTCCCATAGATT
TATTGTAGCGTTGTAAGTATGCAAGTAGATGTTCCAAGTGGGTTTCCCCA
AAACCCAAAAGAAGACTGACATATTTTTCAACATCAATGAAATTTGTAGG
GTTGGTATATAAGTTTGATTTGAGAAAGGCAGCTGCTTGGTTCATCATAA
CCCAATACTATAAAATAATATATGCTCATAATGTTATATGGCACATGGGT
TTGAGAGCCTGAACCTTTCATGTCAAAAAAGTCCCGAAAACACTGAAAAC
ACTTTTACCTGAAACACCTTTTCTGAACCTTTCATGGTTTTCTGGGTGTT
TTTGGCAAAAACATTTTACCAGAAACACCTTACCTATCGAGGTGGTGTGT
TTCCAGCATTTCCTGTGTTCCTGGTATTTCCATAAATCAACTCTCAATTT
TCCCCACGAAACTCAGGCAAAAATGCCATTTCCCAGAAACACCACCATTT
TGTGAACCATTCAGTCTTTTTCCTGGTGTTCCTGGTATTTTTCAAGACGA
TTTTGAAGCTCTTGCAGTGTCCTGACTGAACCAATCAGATAAAAATCGGG
TTAAAAATCGGGCTAGAAAATCGGAAAAAAAAACGGGGAAATGGGACTTT
TCGATACCGTTTCAGCCAGTCGGGACTTGTTTTATAGCAGTCGCCTTCGA
CAGGACATTTAGTGTTTATGGTGTTTTTAAAATTGAACCTTTCATGCTTG
AAAGTGTTTTCTGCAAACAAGGTAAGCAAGGTGTTTTTAAAAACATGAAT
GGTTCAGGCTCTGAATATGTTAAGCATTTCAAATGTTGCACCCCCCTTTA
AATTTAGCTTTCATGGAAGTATGGTAGAAAGTCAAAAAAAAAAACTTTTG
TATTGTAACCACTTAATCATGTTTTTAAGCATACAAGGAAAAATATCTCA
GAAAAAAATGAGATAAACACTTACACTTTTTAACCCAATTTGAAGATTTG
AAACCAAAATAAATCGTACTTTCAGCTTTTACAACTAGAGGTTTTCATTC
ATAATTTTTCATATTTTTTTTCTATCTAAAAAGAGAAATTAAACAAAAGG
TTTAATGGATCAACATTTTGATACATTGAGTGAAAACATACTCAGTAGCT
GCATGCAATAGGATAATGACTTCTTTCTAAAGCAAAAACTGTGATTAGAG
AGATTCCTAAAACTGAATGACAATATATGGCAACCGTGACAGGAATATCT
TGGCTTCATAAATAATAGTAATAATAAATGGGTAAACAGCATTTATATCC
CTACACTAGCGACCATAGTGTAGTGGTAGAGCATCCAGCTATGGTGCGCA
AGGTTGTGGGTTCAACCCCCAGTCGGGTCATACCAAAGATCTTCAAAATG
GTACTCGATGCCTCTCTGCTTGATGTTCAGCAATTAAGACAAGGATCAAA
GGTAAGGGGAGTAATCCAGGGAGAAAGAGTGGCGCCCTCCCCTACCTTCG
GGTAGATAGCTATCGAATGAGGAACCTTCGGGTAGCCTCCCACTGCAGTC
GCAGACTTACTTACTTACTTAAAAATAAATTGAAATAAATAAACAAAACA
AATAATAATAAATAAAATTAGTGAAAAAATAGTATTTTAATTTATTGATG
TGTGTGAACGTGTACAAATTACATAAAAATATGGTATTTTTACAAATCAT
ATAAAATAACTAAAAAAGCGATACATTACATATTAGGAGTCTTCTCGTTA
GAAGATTAGAACCGTCTTATGCTTTAGTTTTACTGCCTGCCAGCTTACCA
GACATTGACACACAGTTTTTGAATTAAGTGCGTTAATTCAGCGTGAACCA
CTAGAGAACAAGGACATGGCGTATTATGGAATCAATACCTAGCCCAGTTA
TAAACAGGCTTATTGAGTTTCTGTCAACCCTATTCCCCTTACATGGGCTG
TGTGAAGGCACATTCACTTGCAAAGTGAATAATAAAGGTAGAAAATTTTT
CATTAGGCTGGACTTAAAAATGTTGGTTTGCCATCAGCCGACCCTCGATG
TTAGAGGCCAGTCGGAAAATATTTCATTTTGACGACTTGTGAAAGTTCTC
TTTACATAATTTTGAAATAAAAACAGAAGAGCTAGAGGGAAATTCACGAT
TCTTAAGCTTANTGTGAAAGTTCTCTTTACACAATTTTCAAATAAAAACA
TAAAGAGCTAGAGGGGAATTCACGATTCTTAAGCTTAAGACTCGGGGTAC
CTAAGGCACTCCCCATAACGGCCGCACAAGGTTCCATCCCTTAACGTAAA
TGTGCATAGGGCTATGCCAAGGTGTGCGAGCTCGTGGGTTGCTTTATGCC
TTCGATTATTCTAGACATTGTCATACAATGTAACATGACGACAGTGAATT
ACTACCTTGATGTAACGTTTGACAATAGCAATTAGTACATATCGACCGTA
CCACAAGCCAAATAACGAAACCAATTACGTTCACGTGCAGTCAAACAACC
CTCCCAACATCATTAAGCAGATCCCACTTTCAATTCAGACACACTTATCC
AATCTTTCATCGAGTGAAAAGATATTCCACCGAGCAACGCTGCATTACCA
AAAGCGCAACAAAGGTCCGGTTATAACAATGCTTTTGAATATAAACCAAC
ACGTAACATCGACAACAACAAAAAATAGGAAGAGAAAGATAATTTGGTGC
ATTGAAGATACTGTCACATTTTCTTCCAAACTACATCGCAAAATACTAAA
AATACTTCGCAAACAGTGAAAAAAATATGCCTGAGCTCCATTTTTTTAAG
CTTGCTTCACTTGAAAAACAGCAAAGCTCCTTAAAATTTATAAATCGAAC
CCTGAATATGCTTATTAAACATTATAATTATATACTAATATCCAAAGGAC
TTTTAGTGCGTTCAGCTACAGCTTAACCGGCGTGCGACGCCGGGTACCGG
CTAGTAGTTATATATTTTAGTAAAAAATATAAAGTCAAAAAATATACCTG
CATAAACATAAATTCACTACATTGACATTTTAGCTAGACTTTTTCATGTA
AAAAGTCTATACAGAAAAATTTCAAATTTTAAGATCATCTCCAAAAGGAA
CTCCTTTTTTGTGTTTCTGGTCACAGAAACTTGTACTCGTTGACATAGAG
TAATCTGAATAATCGGTTAATGTCCAATAAATTTTTTGAAGATGTTGTGC
CAACCTCTTGAGACATCATCATAGAACTGATCCTAAAAAATGGTTAAAAA
ATAAAATGTAAGTTCTAGACGACAACTGAAGAAATCAATGAAAGTCAATG
CATGAAAATGGAGAAGTTTTTATTTTTACCTATTCCTGCAATCTTCATTT
TCTTTACGCAAGCTCACTATCTCATCTTGTTTTTCTTCAATAATCTTCCT
GGCTTGTGATGCCCTATAAAAAGTTGTTGAGATCGATGATTATTGGTACC
AAACTTGTTCAGGATAATTCTAATTTGAATCTCGTGTGATTTAAACTTCT
GTCATGTACAAACTCAAAATTATTTCTCTTATTTGAAAATGGAATTTTTG
TTTTGAGTGTGTCGAGGCCCTACCTGTCCTACCTTTATAAAATCTAATTT
GCATCAGAACAGAGAAAATCCGAAAAGGGGTTTTAGATAAATTGGTCGAA
ATAATCTTGAAAACATTATTTTAAGAAATTCAAACTCAAGGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCATCTGAACTTACTTA
ATTTCATGAACAGATAGAGTAAACAAAACAAAAGGGGAGACGAGTACAGA
ATGAACTTAGACAAAGTCAGTTCCCTATAAAAATAATCTTTGACATAACC
AGCTCCTAAAGTTACAAAAGAAAAGTTACACTTACATTATGAAATTAATC
GTTGAAGCTCTAATATTTGACTTCACTAACCTCCTTATAAAAGAAAAATT
GACCTCTATATATACTAGGTCCCTACTCCTAAAAATAAAACTTAATTACT
TGATTATATAATCCTAGTGGGGGTTAATGGGGTTAACTTTCATATTTCAA
AATAACAAAATCATAAAAATTGTCATAAGGAAGGCTGAACAGGAAAACAT
AGAGGAAGGTCATTTTAAGGTGATTAAAAGGTTCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGTTGAATGCCGTGTAG
CTCTTGGCGTTTCCGATATTTCAATTCTGGAGCGTCAAATTCTTTTCGAA
GACAATCAGATAACTTCTTATAGTCTTCTTTCGAGTTATTAGTTAGGGTC
AAAAAGAACGTGTACGCTCTATTCTTTAATAATAGAGGTATTACTCTTGC
TTTCTGCTGATCGTTTAATTGGTAAAATGACAATGACAAATCAAGTTTGG
TCAAAAACTCAACTATGTCTTCATCTGATTGGGCACCAAATTTTGGGAGG
GAAGCAATGTCCACTCTATTGGCAAGTAGGGAGGTAAGTAAAACTGTGTC
TGACATTGGATTCGACTCTTTCACAATTTTCATTGTGTTATTAGGGTTGG
GTTTTTGACTGTCACTTCTAAGCCCGCGAATAGCAGGGGTAGAAATGTCA
ATAGGGAATGGGGTTTTGGACGAGAAGGGTTCTCCACGATTGACTGGGTC
ATTTGTTTCCAGTCGTAATCTTTCTAGGAGATTTTCATGGTTTTTGTTGG
TTTTTTCAACGAATCGTTCTAAGATTTGGTGGGACTTCTTAAGAGATTCG
AAAGCTTCTTCAAGCTCGTCTCTCAATTTTAGGGACGGGGGTGTGCTATC
AAATTGCACTTCTTCTTGTAAGTTCTTTAGTTCTTGAAGGATCCTGTTGA
CTTCTTTGGATAGGGCTTCTTCTTGTTGTGATCCTTTGTGTTGTAGGGAT
TCAATCGATGGGATCGAAGGTGTTCCTGGCTCTTCTGGTTGTCCGTGACC
TTGTTCAATCTTCTGTTCCAATGTTCAGGTGATATCCTTCAAGGTATTGA
CGTATTGTCTTTGGCCATTAGACAACTCGCTGATACTTTGCTTGGCGATT
TGGATTCGATATTGGATATTCTTGTACATCTCTTCCCGTGATTCTTGGTC
AACAGAGTCAGTCCTTGCGTCATGAGTCTTCTCTCCCGTTGAATCCCACT
CTTGTCCTAGATGCATTCTGATTGCACCCAGTGCGTGGCGTCGTGGTACT
TTTAAGTTGTCGTGGGTTGACATAATTACATAATTTGGGTCAAAGGGGAT
TTGTGCCATAGAGGATTCGCCTCTAGGCGGACCGGTCAAATTTTTTTCTT
TTAAGTACTTCATCAAAGACTCCCATTTAGTCTTTGGCTAACCACCGTCA
AAGAATTTCTTTTTATTCTTTGGAATACCATAGAAGCTCCCTTTTAGCTT
CCGTATACCTTCAAAGGCTCCCTTAGTCCTTTGGCTATCTGTCTCAAAAT
TTAATGGGATACTCTGTCAAATCGCTGGAGTTTTCTTTTCTTTTCTCCGC
AAAATATTTTCGTTACATGTTTTGACTTCTACATGTACAAATTTTCAAAA
TAAAAAGGGTTTCTTTCTTCAATTAGCTAATTTTTTCTTCAAAGGGGATT
TCTCTTTAATTAGTAAAATTTACATCGCCTACATCAGGGGCTACGTCAAG
GTTAATTAAGGCAAGTTCAAGTTCAATATCTGATTTATTAAATCCGGTTT
CAAATAAGAGGAGTAGATCAATTATATCTATAATTCGATAAAAAATTGAT
AGAGGCATTGAGAAATCATTTGCTTGAGATTTCTAAGTCAATTAAAGTTA
ATATTAACAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACACTGAT
GAGACTCGTAAAAATGGGACATGGGTTTCCTGTTGTTACATAATAGCTCA
CGTAACCAAAGTCGTTAACATTTCACAACCTGAGAAGGGGGGGTTCTGGC
TTCGCTCGTGATTCAACAAGTGTTAAACAAAAATATTCAATAAATAAAAA
TCACGATTTTTGATCAAAAAGACATTTTTGAGGTTTTAAGTATAAACCTT
CTCTTTTTTTATGGAGGTTGAGGTCACCATCCTTACTCTTTTTCAGCAAT
GCGATTAGCTTCATGAAGATCACAATTCCTGAAAACAAAAAACAAAAAGA
GTTTTATTTCTTAAATTTTTGCTTCACAAAATCTTTGGCATTTTATGTTT
TATTCAGTAACTTAACTATATATGTCAAAATCAGGAAGATTTGAACCTTT
TCAAAAAACAGTTCTCTTAAAAGATATAAGACAAGACAAGACATACTCCT
TTCCTAGTGGGAATAAGCCCTAACCTAAATCAGAGATCACTTCACAAAAA
AGATATACACACAGCAAATTATTGATTTATTTAGGATTTTTTATAGATGT
TATCTGCTAACTTTTTGCGCTCACGATTCAATTCAGACTGTAGTTGCTCA
TGTTTCCCTCTTAATGTTTCGATTAAATCTTTTGAACTGTTCTCCATGGT
CACTGTACGAACACTGTTCTTGATATCTTGTGCTGTAGCAGTTTCCAACT
TTTGTTCCTGTTCTGGCTGCTTCTTCTTCTCTGGTTCTTTCCTTTTCTCA
CATTTCCTGAAAGACAAATTCATATCAACTGTTAAAATGTTAAAAATAAA
TACTTAAATAAAATTTAAGGATGTTAGATGAATTTATGCCCATTGGAAAA
GAAAATGTTTAATTCTGCTCAGGGACATATGAAAAACAGTAGATGGAAAT
TCAATAAAAAATGCTAATATCTTTATGATTATTGAGAACAAGAATAATTT
TTGGAAAAATTCTGTTAGTTTCAAGACCATTGAGTTAAATACAAAAGAGA
GAGAGGAATGTTCAACAAGTCCAAAGCAAAGAAAAATGAAACTTAGAGAT
TTATGCCATATTTTGGGGTGATGCAATGGATTTTTCTCTCAATTCAGAGT
TTGACCGAAAACCATGCGGGTCTAACATTTTCAATAAGAAATAAGTGACA
TCCTTTCACATCCAAGATGGGCTTTGAACTCAATGCTCAAGACACATTGC
AATGAATTGAATTTAATTAACATATCTGTACCTCAATTTATCTTTGTGAA
CATCCTTCAATAAAGAAAGCAATTGCTTTGACCAATGAAGTATGTTTGTT
ATGGTTGACAAATCATTTGTAGAATAGGGTTGAGCTGCTTGATTCAGCAT
GGATTTGAAATTTATATTGATTTGTATTAAGAAATTATTTTTAATTTCAT
CAGCTGATATAAACCCCATTAGTTTCTCCATTGCCTGTCTATATTCTTTT
CCTTCTTCATAAACAAATGGGTCATCATTTCCTTTTCTCTCAATGGCATA
TTTTACATTATGCATATCAGCTGACCCAACTTCAAGTAGATAGAACAGAT
AAAGTGTCATTTCCCCTATTTCAAAGCCTCTTGACTTATTGGAATTTCCA
GTTGGAAAATGAATCACCCTCTTGGAATCAGCAGAATATCTGTAAAATAA
AAAAAGCGTTAGAAAACAGTTGTTATACTTGCAGAATAATGAGGGTAAGG
ATGAGGCCCTGAGATCAGATTGTGATTGTTTTCTACCCACCACACTAAAG
CTCTATTTGACGAATACGCTATCTCAAAATCGTAAGAACCGCGCTCATCT
AAAAGGACTGGAAATGACAACAAAGTTGCGTGATCGTGTTTAGGAATAGG
GCATCGTATCAGGAAATTTTAGTTTTTTACTTTCCGGCGCACAAAAAGAT
TCTTATTGTAGAATTTTCCACGAGAGGACTATTTTCCTCAGATGGCTAAT
TTTCAAGGGCCTTCAGAGGTTTACCATGCCCGTAAGAAAATTATGACTAG
CTGTTATCAGGCTAGGGAGAAGGGGGGGGGGTGGAATGTTTCCCTCACAG
AGGCAAAACACAACATTTATTTCATAATGCAATTTCTTGATATTTTCTAA
ACGCAGTTGAAAAAAATTTCTTTACCTGTCAACTACTTTTTCAAACAATT
GCAATGCCTCGTTGCAAAACTTCAAATCTTTTTCAAACTCATGCTTTCTT
TCAGCAGCAAAAAGTATTTCGCCAACATAATATAGAACATCCTCGAAATA
AGACACAATAATTGAAAGTCCATCGATATCAAGTACTGTACGGAATTTAT
AGTTAAAAGTGCAAACCAAACGATCCATTTTTCGAATGAATACATCAATG
GATTTTAGTTGTCCCGTAGATTTATTGTAGCGTTGTAAGTATGCAAGTAG
ATGTTCCAAGTGGGCTTCCCCAAAACCCAAAAGAAGATTGACATATTTTT
CAACATCAATGAAATTTGTAGAGTTGGTATATGAGTTTTGTTTGAGAATG
GCTGCTTGGCTCATGATAACTCAATACTAAAAAATATTATATGCTCATAA
TGTTATATTGCAAATGTTTGAATATGTTTGAAACTTATCAAGCATTATAA
ATATTGCACCCCCCTTTAAATTTAGCTTTCATGGAAGTATGGTAGAAAGT
CACACGAAAAGTTTTGTATTGAATCGACACTAAATTTTCTAATCATATTT
TTAGGCATACAAGGAAAAAACCTCGGAAAACAATGAGATAAACACTTACA
CTTTTTAACCCAATTTGAAGATTTGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006787TCONS_00006787Clytia hemisphaericatranscript
TCONS_00006786TCONS_00006786Clytia hemisphaericatranscript
TCONS_00006785TCONS_00006785Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000070supercontigsc0000070:326421..336596 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.13	23.06	9.55	5.62	3.11	1.77	4.38	5.16	6.44	6.41	3.6	2.63	10.72	7.55	17.57	14.67	15.65	12.7	14.16	18.79	11.31	14.82	12.98	17.05	7.07	13.47	10.41	12.12	16.44	10.86