XLOC_003736 (gene) - C. hemisphaerica

Overview
NameXLOC_003736
Unique NameXLOC_003736
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000069:374027..383153-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003736 ID=XLOC_003736|Name=XLOC_003736|organism=Clytia hemisphaerica|type=gene|length=9127bp|location=Sequence derived from alignment at sc0000069:374027..383153- (Clytia hemisphaerica)
TGGAGGAGCAGGGGCTAGTTTGAATGACAAACTCTCTGAAGCTCTTGGTG GGCATAGCAAGGATACCAAAGCTGCAATGAGTATGCTTGGTGTTTCTCCC GGCAAAACTTTCTCCGATGGATTGAAAATGGGACTCGGTGGTGGCGCAAG TAAGTTGATGATGTCATTTTTTCTTACAAGACACATTGACCAGTGTTTTT TTTTAGTTCTGATCATTTAGGGTTTTTCGCCTCGGAATGTTTACCAGCAT TTTCAATTCTTTGAGTTCAAGTCTAGCCTCATTATGTGATTGATCATTTT AAAAGAAACGCCACACCCAGCAGGATCCTAATCGCTAAAAATAAGTGTTG CTTACACATGTCTTACTATACGGGAATCTTATTTTGTTCGAATTACAGAG AGTTTCGAGTTATAGAAAGTATTTTAAGAGGGTTTCTCCTTGAAAGGGGC TGGAAACAATTTCAAATTATAGAAAGATTTGAATAATAGAAGAATTCGAA TAAGCGAGAGTTTACTCTATTGATAATTCTGCTAAGACTCTTAAATAATT ATTTTAAAGATTTCATGTCAACTGAAAAAAATTGCGTGTGTAAAACAACC TTTAATTCAAGCCTGAGTTCGTTATATTTTTTCTTTGTTGTTCATAAAAG AAGGCATCAACGGGTGTTTCCGTATAAAAGATTACGGCATAAATATCAAG AATTTTAACTATTATTCTTTTTTTTCAGATGAAGTTGTCAACGGACTGTT TAGCGGTCTCGCACAATTCGGCGATGCCATGGGAAAAGGTTCTTTCAACA ATTTCCTCGCGGCCGCTGGGACTGGATTGGCCAATCATTTCGGACCTGCA ATGGCGAACGCGGCCACCCATGGGTCCGCTATGTCCGCAGGGTTAAACGG AGCCGCTAGTATGATTGGTGGTTCAACTCTAGGAGGCCTGGGTCTAGGTA AGAACAGTACCTGATATTTCCTTGAATGATTTCAAAGAATTAGTTATTCT GAATGAGTGATCATAGATACTTTGACGATATCTCAGAACTTCTGCGTTTA CGAACTTTTGTTTGTATAATTTATGAACAAGTTAAAAGTCCATCTATGCA AACTTTTTAAATAGCAAGGACCTGACGTATTATTCAATTAGATCTGCTCT GGAGTGCAGGGGAGCGCCAATGAGGGATAATACTTTTCACAACATGTCTC TTCAAAAGTGTGGTTCTTTCTCACTCGTTAAAGCTATCTTACTCTTCCTT TTCTTCAATATAGGAGCTGGACCAGGCGGTGCTGCAGCTGGAGCGGCCGC TCTCCTCGGTATTGGACCTTCATGGAAACGTGGCTGTATCAATCCACAGC AATGCACTCAAGAGGAGATCTCAAACCAGGCGCAGTCGTTATTGAATTAC GTCACGTTTTTGAATAAGTCCATAGGGAAACGGTCACGCATCCCAAGAAG TTCTCCTAGTAAGTTTGAATGAGTAATTTTGATTGGCTACGCTAGTTTTC AGAAACCAAACATTGTAATTATAGCTAGTTACCAAATTCTTATAGCGTAA AATAGTCAGATAGGGGTCGAATGTCTGCTTTTTCGACTGGTTCCGTTAGG AGAATTGACGTCATCTTAACTAACGCATATCGTATTGATGTTACGTTAAC TTTGAAGTTTTAAGCTATCCTAACATCTATACCACCCTTTTTGGTATCAA AATATATACCCCTGGTCGTATTTTTTTCTGAAAAGTATACTCCATTGTGA ATGCAAGAATTAGAGGGTGTAGGGTGTTAGTTTATAAGAAATACAGCCAA ACTTTTGTATCAAGATAAATGAAATTATTTTCAGACTCGCTTAAAGCTTT AGAGGCCATTATAGACCTTTTCATAAAATACGTCACGGGCATCACTTGCC TCGTATTAAAACATTTACCATGGTGATAATGTCTCTTGAGACATTAAATG ATTTTTATGAATAGGAAGTAGTTTTAATATAACCCACTGTGAGTTAATCA CCATGGCAATAATTTCAAAACAAGGCAAGTGATGTTTGTAACGTAATTTA TGAAAAGGTCTATTGAGAGCTAAGAGTTTTCTTTTTTCTATTTTTTACAG ACCCTCACTACTATCCATATTATAACCCGGGACAACCAGTATGGAAACGT TTTGTTCATACGATCGGTCCGAACCGGCCGTTACCGTATACTGAACGAAC CGGAACACGTCGTGATATAGTTCGTGTCGAATTACCAGAGTATTATGGGC CATCCCATAAGTCTTTGAGTAAATCTGAACGAAATTCTCAACGTAAGCAA CAGACCCTTGAAGACGCTGTTGAAAGCATGAAAAAGGTTTGAATATTAAA CACGATATATTACGCTTTTTTGGTCAAGCCCCTATGACCCTCTAAATTAA AAATCTTTTGGTTTCATTTCGGTGTGTGGCATCCTTATTTTAGCATGATG TCTGATCGTCTGCCATGCTTATTTCGATAAAAGAGATCCTCTTTTTTGAC ATAAAATATCTTTCCAGTTGCGATAAAACTGCACAACAACGCCCATCTTT ACGTTAGTATTTCTTTAGTTAAACATTAAGAAACGGTTGTGTTTATCCCC AAACGGCACACAACGTCAACGTAACGTCCATGTGACATTCATAACGTCCA AATAACGTTATTTGAACGTTAAATAAACGTTGTGTGCCATCTGGGTCAGC TAGGGTTGCTTTGTTGATACGATCCCAAAATTAATAACAATTTGAGCTAA ATTTTCATCCATTTTCTGAATATTTCTTTCATAGAACAACATGCATCATT TAGTTCCGTTGGTCAAAACACATGGTAGCCCATCAACCAATGAGAGGACA GCTTTTCAACATTCGACCAATCAGAAAGCAGCTATTCCTCAACCAACCAA TGAGGAAGCAGTAACAAACAAAAGACAAGTTAACGAAGACCTTCAAGTGT ATAAAATGGAAAATGGAACAAGAAGTAAGAACAATAAATAATTAATTAAT TAAATAATAATTGGTTTGTTTTGAAATGGGCTATTCCAGAAATAGGTTGT ACCCTGTATCAATGTTGAGGAGGTCTTTTTTGGGAAATTTGCCCCCATTG ATTTTCTTCAATTTTTCAGGACCCTCTTGGATTTTTATCTTATTTCACTG GCCACCCTGGATTTTTCCACCTCATTTCACTGACCACCCTGGATTTATAC ACTTGAAAAACCAGACCCCTTAGATTTTTTATTTTCCAGACCACTCTGGA CGTCACACCTCCTCACCATAGGGGTTGTAAACACACTAATTCTGGAATAG CCCAATGTTTATTAAAACTGTGGAAAATACGAATATTTCCTGCAACATTT TCTGCCAATATGGCTAACAGAGTGAATTTTATATTTTGTAAACCAAAACC ATCTGTGAACGAGCATGCCTGACGTCAAATGACTGAGAACATACAGACTT TATCTCGACAGGAATGACTTCTTTACGCTAAAACTTATACCCTCTCAGAG AGGTAGCTTTTACTTTACCCACTGTAACTAGACAATACACCTTTTACGAT AATACGACCGTAGCCGCCAGTTGCCGCGCGGGCATTTTTTTGTCTGTTTT ACCACCCTAAAACCGTGCCAGTCTTTTTTTGCACCTATAGGCAATAGATA AAGATAAAAAAGATTGGATCGAGTTTAGTAGGATAACTAAATGATAAAGT GGCACGCACCTGACTGCGCGACTACGGTCGAAAAGGTGTACTATTTGGTT GTTTTGTGAAAGATGTTTTCAGGCGAAAAAACAGTTCTGAAAATTCTCTT TTTCTCTGTTTTGACCTTTAGAGAGCGTGCAGCCAGGGAGTAAACGTTAC ACACAGCCTTTCAACGAACGTAACAGATATCACTTAAACCATACACGAGG TACTTTTTCATATTTTTGAAATANTATGGGCCAACCCATAAGTCTTTGAG TAAATCTGAACGAAATTCTCAACGTAAGCAACAAACCCTTGAAGACGCTG TTGAAAGCATGAAAAAGGTTTGAATAATATTTACGATATATCACGATTTT TTGGTCAAGCCCCTATGACCCTCTAAATTAAAATGTTTTTGGTTTCATTT CGGTGTGTGGCATCCTTATTTTAGCATGATGTCTGATCGTCTGCCATGCT TATTTCGATAAAAGAGATCCTCTTTTTTGACATAAAATATCTTTCCAGTT GCGATAAAACTGCACAACAACGCCCATCTTTACGTTAGTATTTCTTTAGT TAAACATTAAGAAACGGTTGTGTTTATCCCCAAACGGCACACAACGTCAA CGTAACGTCCATGTGACATTCATAACGTCCAAATAACGTTATTTGAACGT TAAATAAACGTTGTGTGCCATCTGGGTCAGCTAGGGTTGCTTTGTTGATA CGATCCCAAAATTAATAACAATTTGAGCTAAATTTTCATCCATTTTCTGA ATATTTCTTTCATAGAACAACATGCATCATTTAGTTCCGTTGGTCAAAAC ACATGGTAGCCCATCAACCAATGAGAGGACAGCTTTTCAACATTCGACCA ATCAGAAAGCAGCTATTCCTCAACCAACCAATGAGGAAGCAGTAACAAAC AAAAGACAAGTTAACGAAGACCTTCAAGTGTATAAAATGGAAAATGGAAC AAGAAGTAAGAACAATAAATAATTAATTAATTAAATAATAATTGGTTTGT TTTGAAATGGGCTATTCCAGAAATAGGTTGTACCCTGTATCAATGTTGAG GAGGTCTTTTTTGGGAAAGTTGGCCCCATTGATTTTCTTCAATTTTTCAG GACCCTCTTGGATTTTTATCTTATTTCACTGGCCACCCTGGATTTTTCCA CCTCATTTCACTGACCACCCTGGATTTATACACTTGAAAAACCAGACCCC TTAGATTTTTTATTTTCCAGACCACTCTGGACGTCACACCTCCTCACCAT AGGGGTTGTAAACACACTAATTCTGGAATAGCCCAATGTTTATTAAAACT GTGGAAAATACGAATATTTCCTGCAACATTTTCTGCCAATATGGCTAACA GAGTGAATTTTATATTTTGTAAACCAAAACCATCTGTGAACGAGCATGCC TGACGTCAAATGACTGAGAACATACAGACTTTATCTCGACAGGAATGACT TCTTTACGCTAAAACTTATACCCTCTCAGAGAGGTAGCTTTTACTTTACC CACTGTAACTAGACAATACACCTTTTACGATAATACGACCGTAGCCGCCA GTTGCCGCGCGGGCATTTTTTTGTCTGTTTTACCACCCTAAAACCGTGCC AGTCTTTTTTTGCACCTATAGGCAATAGATAAAGATAAAAAAGATTGGAT CGAGTTTAGTAGGATAACTAAATGATAAAGTGGCACGCACCTGACTGCGC GACTACGGTCGAAAAGGTGTACTATTTGGTTGTTTTGTGAAAGATGTTTT CAGGCGAAAAAACAGTTCTGAAAATTCTCTTTTTCTCTGTTTTGACCTTT AGAGAGCGTGCAGCCAGGGAGTAAACGTTACACACAGCCTTTCAACGAAC GTAACAGATATCACTTAAACCATACACGAGGTACTTTTTCATATTTTTGA AATATATTTTTCAACAGCGCTAAAAATGCAAGAAATTCACGCGCGCAAAC TATGATGCGGCATATAATAGCCTGAAAACGTCTTTCCAACACAATCAAAA ATCAATAAAATGAAATGCATACAAAATTTCGTAAACATAACAAATATTGC ACGATTTCTTACCGTAACTCTAGACAAATACGGCAAGCAGCGAACGAACT ATGGTACCAAAAAGACGTCACCGAAAGGTTTAAAAACAAAGTCTAGACAA AATGACGATACAAAGGAAAATACCCACAAACACTTGCGAGGATATAATTC TAAACGGCGGGAAACGTCTTCCGACCACGGTAGCTCTCTCAAGAAGAACT TTCGTGACCGCAATAACAGCAACACCGATGACGGGACGGCAACGGTTTCT AAACGACGGGAAGCGTCTTCCGACCACGGTAGCTCTCTCAAAAAGGACTT CCGTGACGGTGATAAGAACGGCATTGACGGGACGATAACGGGATCAAAAC GATGGGAAACAAACCTTGAGCATCAGCATTTTCATAAAAACCATACCAAC CTCACACAAATTATACAATACTCTGATGAAATAACGCCCTACATAGGAAT CTCTGAGGGCGCTAGGGTGATCGGCGACGCCCTTTGGGACGACTCTACGG GTGACTTTACGCTTGACGGTTTGAACCATCACATGCCGATGAAAACGATT TACGAACTTGAAAAATTCCGTACTGATATGATGAATTTGACTGGTGGACA CAGTAAGTCAATGGAGGTCTTTCATGTTTCGTAAAGTTACGTAATTTTCG CCATTATGAAAGCAAACATTCGAATCTGTAGAAGCAAACACCTACGCAAA TCGAATGTTTACTTCCATGATGTCGGAAATTACTTAACTTCACAAAGCAT GACAACCTCTATAGGCGAAACAATATGGTTTCGAGAATCGCGAAGATTTA CTGATTCATATAGCTTTGCTGCTATTGTCCACACCTTCGGAAAAAGAATA TATTTGACTTAGAAATGATCGTGTAAATTCATGCTTTTTATTTTCGATGA TTCTAGTCTTTTAATTGTTGTTGGAAAGGCGTTTTCTAAACAGACATTGA GCTTTAAATGGTGACAATGTTATGTTTTAATTATTTGTTCGAATTAGAGA GATTCATATGATATTTTAAGCGGGAATTAGTTCGAATTATAGAAAGATTC GAATAAGCGACAGCCTACTGTATTTAGTCTTTCAATATTGAAAACAAGAC GACGTTGTCCCTTGAGTCATCTCACAAACCCTTAAGGGCTGTTCATTTGG AGGTAGGCTGTCTGAAGTCTTATTTTGTTAACTTATANGCTGTTCATTTG GATGTAGGCTGTCCGAAGCTTTTTTTGTCTTATTTTTTAACTTATACTCC CTCTTTTAGATGACCTACTTCTGCAAGAAGTTCAACGTCTTGGGAACATG GTGGGTATGATGGGCGCTCGGATGGATGAAATGCAAACGTCAGGTGGAAC GAGAGAAGGATCAGGTGGATTAGGTGAGTTGCGGCATACTTACTTGTAAA AGAAGGCTAAGAGACTTTATAGTTTTAGCTGAAATCTCTTTGACAGTCTA AGCCACAGATCTAATCCGAGGGGTTAAATGGAGTGAAAAAACAGTGAGTA TCGCAAAAAATATTGTTGCTATTGTTTTCAGAAATCCGTCAAAAAACTTT TGAGACAGACTTTAATCACACTCGCCTTTCAATGAAAGGAAATTGAATCC TTCATCACAAAGCACTAACTACAAGTTATTTTTCTCCTATTTTAGCGGCT TTGCAAGCAGCCATGCAACAGCAACAAGCGTCCGTACAAGCGAACGCCCT TCAAATGGGAAATATGAGGAGCCAAGCTATGTTGGCTTCTACGTTAGGTA TGTCAAACCAAATAAACTTTGTTTATAGTGAAGCTTCATAATTCTTTTAT AAACTTTTCGTAATACCGTATCATTACTTCTAGCATACGTTGTGCAGTTT ATAGTTTGTTAACAAGAGATTTTCAATTAAAATCATCATACATTTTGGGT TATGAGTTAGCCTCAAGATTTTTAACCTTATCTAACCGTTCTTTTTTTCT TACAGGGAAAATTGAGGGTGCGATATCTGGTTTGGCGAACAAAATAAACG GCGGTGGTGGAGCCGGAGGTGCTGGTGGCGGTGGAGGTAAAAATATTTCT TAAATTAGTTAAGTCGTTATTATTTATAGTCGTTACATTTTCAGTATCAT TGATATGTTTAGTTTTTTTCTATTTGATTCTTCCTCGAAAAAAAGGCGGA TTGACACTTCTGTAGGTAGTTTGACGTTGAACAGGGGTATCCTGTATCAC AATATACGAATATCAATTTTCAGGGGGACGGAAAATTACGTTGACTCTTG TCTTTTTATCTTCTTCACTTTTGCATTAAGTTCATGGCTAAAAATTTGTG TTGACTATTTTGACCCTTTTTTTCGTTTTTTAGGCGGAGGAGGTGGCCTT GGTGGAGCTGGAGGAGCTATGGGGGCAGGAGCAGGCGGTATGTCTCCTGA CGCCCTTGCTTTTGAAGCTCAAGAGATGAAAGGTCAAGCACGTCTTGAAG AAACTATGCGAAACCTCGGTATGCAGCTTGCAACACTTTCTGGCAAGATT GATGGCTCAGGCGGCGCAGGAGCAGTAATCGGTGGCGCTGGAGGGCCAGG GGGCGCTTTTGGGACTGCCGGTGATCCTGCAGGTGGCCCTGGAGGTCCTG CAGGAGTTGGAGGTGCTGGTGGAGCTGGAGGTCCTGGAGATACTATAGCC GGAGCTAAGATGAGTGCTCAAATGGGAGTGCTTATGAACGCCATATCAAA ACTTGTTGGTGAGGTCGAAGGTTTGAAAACTCAACACGGTGTAGACGCTG CTATGGTGGGTGGTTCGCAAGCCGCCGCCGCACAAAATGCAGCGGCAACG GCGGCGAACGCTGCTGCGGCCACAGCTGGTCCTTTGAACGCAATGAACAA TCATTTAGGATTCATGACAACACAAGCCTTATCCAACGCAGCAAACGCAA TTACTGGTACCCAAAACGCCGCAAGCATGTTATCGGCTTTCCATGGTGGG AATGCAGCAGCTAACGCTGCCGGAGCCACTGGAATGGCGGCTGGGTTAGC TAATGGATTGGGTGGCTTAGGTGCACTCGCTGCTCCTTTCGCTGGACTAC TTGGTGGTGGTGGCGCCGGTGGTGCACTTGGAGGACTCCTTGGTGGACTA GGTGGTGCTGCTGGATTAGGAGCAGGTGGTCTAGGAGCTGCCGCTGGACT TGGTGCTGCGAACGCACTGGGAGGAGGAGGAGCAGGAGGTGCAGCTGTTG GGCTAGGAGCACTAGCAGGAACAGCAGCAGGAAATTCCATTGGCAATCTG GGTGTAGCGAACATGGCATTAGCCAATCAGATGAATGCATTAACTGCGGC TGGAGCTGGAATGGGTGCGGGTGGAGGAGGTGCTCTACCGCCTATGGACG CCCTTTCTGCTGCATTAGCTGGCGGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006628TCONS_00006628Clytia hemisphaericatranscript
TCONS_00006627TCONS_00006627Clytia hemisphaericatranscript
TCONS_00006626TCONS_00006626Clytia hemisphaericatranscript
TCONS_00006625TCONS_00006625Clytia hemisphaericatranscript
TCONS_00006624TCONS_00006624Clytia hemisphaericatranscript
TCONS_00006623TCONS_00006623Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006623-proteinTCONS_00006623-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000069supercontigsc0000069:374027..383153 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.42 0.58 0.24 0.2 0.18 0.14 1.2 2.01 0.37 0.53 0.73 0.83 1.89 2.07 0.77 2.05 1.16 0.85 0.14 0.16 1.44 1.35 0.52 0.82 2.7 4.22 0.34 0.07 0.06 0.02