XLOC_003651 (gene) - C. hemisphaerica

Overview
NameXLOC_003651
Unique NameXLOC_003651
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000067:113787..117551+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003651 ID=XLOC_003651|Name=XLOC_003651|organism=Clytia hemisphaerica|type=gene|length=3765bp|location=Sequence derived from alignment at sc0000067:113787..117551+ (Clytia hemisphaerica)
AGATGAGGAACATTTCAAGTCCAAGCTTAGCGAGTTTGAACGAAGAGCCT
TATCAAGGTAAGTTGAATTTAATAGAATtaattgttttcttcttttcaga
ACCTTTATGCTTCACAATTTTCTTTGTCACCTTTAGAGCCTTTAGAGTGG
AGGGGGTGGTAAAATCAtaaatttataaagcccgatgggctagatgtcgt
gctttaagacATCGCaggtaaaaaaagtgaatatcggaaaaaatattgtt
gttgttgttttcgaaaacccgcgaaccttctgattggtcaagcgctgaaa
ttctattgtattgtCACGCGACCAGACGCGatctaggtaggatttcctac
ctaaacACGGCACATTTTTCAGTTAAAGTTTGACATCTAGCCCtacgggc
tttataaatctatgggttAAATGCTAGTTATTATGAAATGAAGTTTCTCA
ATTTTACTAAGAAGTTTCCATAAGCAAAAAATCGTCTTACCTTAATATGT
TTGAAGTCAGTCACTCCCAATTTAACCAAATTATCAGCATCAATCCAAAT
CAGCTTTTGGCCACCGACAAAATTGCTGATAAAGCAATCTTCATATTGGG
GATAGTTTAATGTGTTCTTGACCCAGTTGCCAACATCTTGAGGTGACCAG
TGAAGCATTAATGGGATGCCACTTTTATCAAAAGTTGGTTTGTATGGTTT
GCCCATAACTATTCACACTTGCTCAGACAAGATGTTATATATATACCGAG
ACTTCAAAAAATGTAAGCGCACTGACAAGAatcgaaaataagaaaatgac
gtcaaataCATGATTAAATGGTtgctttttatcaaaaaattgattttgta
ggAGAAAGAAAGGATATTTTGATGAATATGTTTTCCTCTAagatttttag
agttttaaaattttgtttcattttagataaattgacgtcaaatatcttTT
TGGTCGATAACGAAGTCATTGCAATAAATCTATCGGTGGCCAAATCTCTG
tcaaagtgtaaaaaacaacttaaatAGAGTGGAGAGAATGGCGGAAAGTC
ACAAACTAAAGAAGTCTTTGAACGTCGTCCACAGTGATGAAATATGGTGA
GTATATTATACAACGAAGTATATtctcgaagggctagaatcgaatctcct
agTTGCGCAGCCTAGCGCGgatcgcctggtttttacacaaatgacagatt
gaaactaaaatttacacctaaatttcgaaaaagatatcactcgaaaacaa
aagaatcgctagattcaatccgtcgtcaaaaatacggcgcatattttaag
gcttcactttttcttgccatTGATATTATACTGAAAAGTATTTTTTACCA
AGCGGTAGGTTCATTACATAATTACTTCTCACGCCTTTACGCAGACCACT
TGGATAACTTTGTGGGTTTATATAGTGTCAGTTAGACCAAATTAATTTAC
GACCTTCATTAGGTCTGTCAGGAAGCTTCTACACGCGAAACTGAATTTCG
TGTGGAAGTTTACGAAAACGATACATTATGCGAAGCTAAGCTCTACCACA
TGTAATAAATGTatcaaatcttcgaaaaaacgaTGCCCACTTTTTGCTTC
GTCGGAAAGATTTGGTTACATTAAATTGAATTCTTTAAAATTCttgttaa
aaattgaacttaaaaaaagtactctctaattcgatttctgatttctttat
gagagtttcttgttaacTGTGATTTTCAATATTATCTAATAATTGAGCGT
ATTGaaaaggcgctgtggtatagtggtcgttgaccttggttgctgcacag
gcgactgaggttcgattcccactcgtagcggttcacttggcaaaggaatg
aaccttcgcccgggtcaacccatgccatgtaaggagaattgggtagtcag
tccaaggtatTGACGGGGCGCTCaatgaaagcgtctatagttgcgaaaat
aggcctcaaagcctcctgcaactcaaccaaatagaaatagaaaattaatt
gtagaacgtcgaattaaagagcgtTAACTTTATGAATTAATTTAATGTAG
GCCTGTTTTAACGTCATACAGGAAAAGCATTACTAACcttttttattctt
cttgtTTTCCAGGAAGGATCACATCGGTCGCGAGTTGCTCGCACAAAGAA
ATTGGCCGCAGAAATGGGGATTCCTCTCCGATATCTATAAAGAGGTAAAC
AAGACTCGACATTAATTTATACCTTGATTCCCCAGCTTTTTTTCGTTCGt
taaaatttaaagttcggaCGAGAAAGATGATTTTAATCTTTCCACTTTAC
GATATTTCAATCTTTTTGAGTGGTTCAAAGTCGACGCAAGCCatgtcaaa
aatatcaaatgatcTTTCCCATTTCCATACCGAAGAGTAAAATAAACACT
CACGTCAGAACCAATACAATACCACAATTCcaattcattcattcaattca
ttttatttaatttttcattttgttacaGCTAGAACAAGAAACAAAAGAAG
ATAGCACAAGCCataatcataaaataaaaacaccgaaagaagaaacgaaa
aaatcctATCCCCGTACCGACGCTCAAATGATCGGGTGGAAGTCCGCCGT
TGCCAGACGTAACCCGTACGGCGTGCCGGAGGCTCACGCTCGTGGCAAAT
GTGAcatcttgaaaacttttgagtGGCCTCAAGAGGGCCAGTAAATCTTA
ATTGTCTGATCCAATCTTTGTTTATATGTCATTTGTAAATACTATTAATA
AAGTCATATATGGTATCGAAAACTGCAgtatttgaatttctttttcccaa
agaaaatagaaaattgttctttAACAGGTATAATGCATGTATAAAgtttt
ttaaacaaataaaggaaaaatatttacatatttttgcatattaatcaaaa
atttaaaaaaaattctagaaaatttCTAAACGATTTTTCAAAAGCTAAAG
CAACAGTTATTTTTCACAAATCTGGCATCTCCTTTCTGTGTGAAAGGGAA
AACAGCTTGCCTTCCAGCTCGGATAAAATTCTCAGAAACTAAGTTTGCAA
TTGACTGAGGGACGACGGACCTAAAGCTCTGTCCAGCCCAGTTCCAAATA
AATTCTGTAATTTAATGCCAGGGAATTTAAACGAACAAGGGATACATCTT
TCCACCTGCCAGGTAGTGATGGAAAATTATTCATACTCTTTAGGAGTCAG
TCATCCTTTCCTCATCTACTGATCAGTTTGTTTAAGGAGATTGAGCAAAG
TCTCTCGTCGGCACATTTTTCCTCCTTACTCTTTTATGAATAACCTGTCC
ACTCTTATTGTCACCCTTAGTAGCTGCTGCAGATTTACTCTTTGGTGGTC
CGACAGCTTTTGGAGGTTTCTTAGGAGCTTCCTCTGGTGTGGGTGGATCA
GGTTTTGACTTCTTGGCAGCAACATTTGATGAAGCTTTAGGCCGGCCTCT
CTTGACAGGCGGTGGTGGTTTATTCTCATCTTCTGATACAGCGGCTGCAA
TACCTCTGGCTGAACGTCTCTTTTTGGGGCTTGCTGATGGAGACTAAAGA
AAAAgcaacaagctagatgctgaatggacctacttgacgatgaaagttag
atagcaatgcaaggagaaaaatgaaaaaaatcagtcagaaaatatagtgt
TTAgggaaaatgcataacgcaataaattcatcattgattgttgatggggg
agagggaagggttgtagggaaaaaaatagatagaaagttctggtcgcaaa
agtcagttttattga
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006387TCONS_00006387Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006387-proteinTCONS_00006387-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000067supercontigsc0000067:113787..117551 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06	0.18	0.56	0.84	0.1	0.14	0.7	0.53	1.98	0.87	1.31	0.94	0.62	0.81	0.55	0.4	1.28	1.83	1.19	1.04	5.07	4.23	1.86	1.5	7.02	6.95	0.1	0.22	1.52	1.67