XLOC_003497 (gene) - C. hemisphaerica

Overview
NameXLOC_003497
Unique NameXLOC_003497
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000063:270587..280145+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003497 ID=XLOC_003497|Name=XLOC_003497|organism=Clytia hemisphaerica|type=gene|length=9559bp|location=Sequence derived from alignment at sc0000063:270587..280145+ (Clytia hemisphaerica)
TATTTTTCCTGTTTTATAACGTTTCATGCTGACCTTTGAAACAGCCGGTG TGtcaaaaatcatattttcaccGCTTGTAAAGGCAAATAAATTTGCGACC ATTTTGGTAGGTTGTGTGAGATAAGAATTTGTTAAAATATTGAATACCAA ATAAAGCGTGAGATCAGTTCACCATTACTGTTATTGGTGGAATTAGGAGT TTGGATTTTTCTAATCggaagtttttttggaattagaACATTCATTAGCA TATTgttcaaaaaaaaactcaagGTAAGATTTGATTTAGTGAGCATACAG CTGAAACTAAAGAGTTGAAATTTTAGATTCtatatttttgctaaaaattg gcAAGTAACTGCAGTAGCGCTCTCAGAGGTGTCggaaaatttatgatttt tatgacaaagcaattatttatttataacaTTAAAAGGTAATTACTTCGTA ACAAAATtgtgctctcctacacaaattatCCCTGAAAACACTACTGGTGA CATGATTCATATTTCAAACTCCAGCAGCACGTTCCGCAAAGACAAATACC CCTTTGGTAGGAAAAGTGGCAAATGGGTCTAGATTCTTGAGATTTTTATA TAGATACAAGTGATTAAAAATTGATTACTGTATGCTTGATTTGTCTTTTC ATGTGTATGTCAGATGGAAATGGTTATTCAGGTGTGCCGCATTGGGTCGC GATGGATGTGTACTAAGTGGCAGCTTTTACACTAGGCTTGGATAGTGGTA GTATTCGAGcatttgttttgaactatttcCATCGATGATCTTTACTATTG ATTTTGTcgtatatatatattttttggattGATTTGCTAGTTTTGGGTTC agttgttaaactttttcttttataaaggTGGTTTTTGGCCTTCATTTTAA CAGCTCTGTATTGCTTTCTTCATGTTTTCAATTCAGAATGACTTTCGACA TCGAATCCATCACTTCACAACAAAAACTCAACAAACGAAAATCAGAAAAG GTTCTCAAAGAACTCTCATTTCATAATGGACGTAATTTACTGACCATGTT CCCCCTTGAATTCGTTGAGCAGAACAAAAGCGATAGAGAGGATACGCTGG TCTTGGTTTTTCAATGCAGCAAGAAGGTCTCAAAAGATATATCCGGTAAA TATTAGTTCACTACCAAGATTTACTTACTTGAttgggataaatttttgcg ggattaaatttcgcggtttagctcatccgcgaaattttaagattttgtgc ggacttaatttcgcggatggcattatcaggagacaatattttcatgattt ttcgtCTTTTTACTGCCAAATTATGCGTACTGGTTGTTGAAATATGCATT AAAGCGCTTCTTTGATAccaaactattttaaaagtaattatctgacattt ttgagttttgttcaataaaatttcgcggatatTTTTTGATTGCATAGAAT TTGACTGTAGAGTTTATTTAAAAATCTGGCACGCTGAAAAAAAGATTCTG AAACAGCTTTCCAGCGAACCCAAACCtctcccagccggcacacaacgttg tttcaacgttcatctaacgttatatggacgttgtgaacgttagataaacg ttgaaagaacgttgtgtgccagctgggctcaGACCTTCTCTGCATTACCC AAAGTCGACAGAATTCAGTTTTAAGTTGCATTTTATCAACGTCGAAAcag cgttgtgtgccagctgggttttaTCAACTTTTACGGTATAGGAAAATTTT AcataatgttttttaaaatctaaaataccCTTTTGCAATACCACGTTTCA GGATATCTGAGTACAGCTGCGGACCAGAGGAGAAGATCAACATTGAGTCG AGCGCTAGATTTACAAGAGCAGATCAAAGAAGCAGAATTTTCAGAAAAAC AGCCTTTTAATGGAGAAGAGGTAAAAGAGATTTAAATACTCTACTTAAGT ACTCTAAGGTTTCTAATAGTAGgaagttttaaataaaaaggGGTTGGAAT TTGTACCTCTAGAAAACCTCAAAATaaggtaccttaaaggaagaaatttt ggcggaaagaaaattttggcggatttggcggatttgactgaaatccggca aattaagttcccgccaaaatttcttttttccgccatccgccaaattaaat tcccgtcaaattaaacattttgaaaataatatgatctcttttaaggtgtt gttgctattttttcgctgttttgacgccatcttaaggttaaatttttaag cgaccgccaaaataaattcccgccaaatttagttttttcgtccatccgcc aaattaaattccctctgaaaaaacttttttggccatccgccaaattaaat tcccgccaaaatttcttcctttaaggtaattaTAAGCTAAAGctaggcta tttagagcaatttAACTTGTGACAGCTGGTAAGGATATTTAATAAAACAG GAGTGGGCAACCTAATAAGAAcgacaattttttgaaaattaatcagcGGG GGAGACGTTTATTCGGAACCTAGAGAGTAGTCAAGTGGTTTAAGGCATCT GCACGATAGTCCAGGAGCAGTTCACTATTCCAAGCCCTATTCCTTCTGAT TTCGTGAATTTCTTAGTTGGATAACCGAGATGTCTGAGCGTGGACCTGCG CAAACAATGAATGAAAAGATTATCTGAAAGTCTTAGATTTGTGGTAAAAT ATCGATTCTATCCATCTATAGGAAGCACCAAGCACCGTGGTAGGAGGGTC CCCAGAGAATGAACAACCACTTGAGACAAATGGTTCTTGCGTTGATCAGC TGCAGTCAGTGATTTCTCAAGATTtgaaatcaaatatttcaaacattgAA GACAACAAAACAGAAGGAAAATCGTTTGACGAAGACAATCAAAAGGAAAT AAATTCAAATCCAAGGAAACAGAAACGAGAGGAAGCAAGTCAAGGTTCAA CAACTCAGAGTACATATGAAAACTTTCCGAGTCCGACAAAAGACCAGGAA AAGTCTTCAAGTCCAGTGCAAAAGTTCGAAGAAAAATCTTCAAGCTTGAC CCCAAACCaaaatcaaaagtcaaaagAGAAGTCGCTTAGCCTGAATAGAG ATCTAGAAGAAAAGCTCTTCAGTTCCAATGAAATCGAAGAGGAAACACTT TTGACCCCAACCCAAGATTCAGAGAAAACATCTTTTAGTCCAGCCCAAGA CACAGAGAAAATGCCTTCTAGTCCAACCCAAGACTCAGAGAAAACGCCTT CTAGCCCAGCCCAAGATTCAGAGAAAACGCCTTCTAGTCCAACGGAAGAC TCAGAGAAAGCACCGTCCAGTCCCGCTCAAGACACAGAGAAAATTCCTTC TATTCCAATCGAAGACACAGAGAAAACACCTTCTAGTCTAACCCAAGATT CAGAGAAAACGCCTTCTAGTCCAACCCAAGATTCAGAGAAAATGCCTTCT AGTCCAACTCAAGATTCAGAGAAAATGCCTTCAAGCTTCATTCAAGATTC AGAGGAAAAGCTCAAAAGCAAAAACCATAAGAAAAACGCCTTCAAATTAA AATTATCATCTTTCGAGAAAAGTATCGATGAATCAACCAGTCCATCTCAA AGCAGAGGAGAAAAATCTCCAAGCGAggacaacaaaaacaaaacgttcAA ATTGAGGCAGTCATCGTTTGAGAAACAGAGTAGCTTTGAAGAAGCTTCTC TGAAAAGCCCCTCTAAGCTTTCAAATAAGGAGATGCTAGCTTCAAATCAG AAAAGAAAAGCCTTTAAACTTAAGCAATCATCTTTTGAAAAACAGGCAAG CTTCGACGAAACCAGGGCTGACTCGACCAAGAGGAATGATAGTTTCAAGC AAAAGAAATCGTCTTTTGAAAAACAGGCAAGCTTCGACGAAACCAGGGCT GACTCGACCAAGAGGAATgataatttcaaacaaaagaaatcgtCTTTTGA GAAGCAGAGGAGCACTGATGAATTGAAATCACCAAACCAAACCTTACAAT CTCCAGAAAAGCAAATGTTCTATTTTGGTTCAATAGAGAAACAAGGAAGT TTGGATGGACTGGGAATCTCTTCAATCCCGGTTGATGGCAATAAGGACAA TACTGATAGTCCATTAACTCCAGAAGAATCCGAAAAAGCAGAAGAAATAA ATCAATCCAATATCGAGACCAACATTAATGGTGATGAAGACATTCAAGAA TCAAGTGTATCCGAGAATACAGAAAATGTTACCAGCCTGAACCGGAATTC TCAAATGTCTTCCAGACCTAGCAAAGATTCTCGAGAATCGCTTGAAAGTG CTACTTCGAAACCTCCAGCCAAAAGCCAAAAGATCAATGGTTTTAAACAA TGGTCTTTCGAAAAACAAAATAGTTTTGAGGGAAGGAAATCAAAGAGTCC TACAACTTCACCAGACTGGCAAACAAAACGAAAGGGCTTTAAACAATGGT CTTTTGAGAAACACACCAGTATTGATTTGCAGAAGTCGCCAAGTCCAAGT CCAGATTGGCAGACGAAGAAAGGGGCCTTCAAGCAATGGTCGTTTGAGAA GCAAATCAGTTTAGATAAAGAAGGTACTAGTAATTAGATTATTTACTTGG ATacgcgttttttttataagaaacgaaaAAATTTGGTTTAGGTTGGgtcg ttcttaatttttcgcaattttcagacttaaatgctcttaaaatggttATA GAATCTGTTAAAATCAGCACTGTCTTGGCCCTCTCTGAAATCTGAGattc agattgttcttaatttgttcttagctTTTGGCTAAgcttttataaaattg ttcttataaaaaaagcatgtaatATCAAAAAGAAAGTCTGTCACGCAACT CGAATATTCATATACAAATCAAATTTTGAGTAGATAAGACGTTTCTGAAG GTTTTGACCGGGGATTTTTATCCAAATTGGAATATTTTAGGGCTCGAACA ACCAAAGTAGTTTTATCCGAGTTTACACGAACCCTGTGCAGCTTAAATTC CGAATTTATCATTAGGTTTTGAGAGTTATACTAATTTGTTTTGTATTCCG CTACAGAGCCGAAAAAAGATACCGAGACAATCGTAGTCAACGAACACAAT CTAAACACAGATGCAAACATAGAGAAGTTTGAAACTCAATCCACTGAAAC GGTGAAAAGTGTAAAACCTGAAAACCTACTTAACGACAAGCTTGATGGGA CAAAGGAAGCTTCAATAAAAACTGAAGGAGAAACGCAGAAAGAAGGTAAG TTAAAAGTTCTGtccaactggcacacaacgtcgtttcaacgttcatctaa cgttcacaacgtccatataacgttagatgtacgttgaaacgacgttgtgt gccagctgggtgttCTTATTATTCATAGGCTGAAATTAAAttgtacccaa tttttactactttgacccctaaattgcttgaaattgagtaattctaGGTA CAtcgtttttcataaattttttccttatttttcgagAATTTGGAGCCTca ttgtttcttataaaagaaaaaagagtgtataCAAGTTTTCGAAATTTATC TTGCTCGAAACTTTCTTGAGTACGTATATCGTAAGAATATTagttaaaag attttcaaagtagATGGATAAGTCAAAGCTACCtcaaagttttttatttc tttgaaactTTAGAAACAGAATACTCTTCAAGAAGCGAACAAAAAGTTGG AGACATCAAGAATGATGTTGCAGTTGATTTAGTTGAACAAAAGGTTGGTT TTCTAAAGTTATGTTATGGACTTGGAAACAACTCATTTCTTTGCTAGCCT CGCAGGTAGTTTAATGAATTTAATCGAAAAGACTTTTACCACTGTTATGA TTTTTGATTCGCTGACTAATTTATTAAGTAAATCCTCTTCTGAGCAAAAA ATCGTTCATCCTGCAATTACTCATTTTTGAAAGGGAAAACTTTGAATGTT TCTTCAAGTGAGTAAGTTTGTAATGGTGACCTGGAGGCTCCCTTTTCTTC AcccctttccctggatttctccatcTAACCTTGATCGGTTTcgttagttg ctgagcatcaagcaccattttgggaatatttagTATAACCCGGCTGGgaa tcgaacccacaaccttgcgcaccgtagctggatacACCGTACCTTCATGA CCGGCTCACAAATGGGTCAGAAGTCACCACACCAGCGGGTTGGAAAGATG ATAAAAAACAAGTTTccaaaatttgccatttttcacATATCTCATCTCAT TCAACTTTCAGAACACACAAAACCTCAAAGAAGAtatcgttccgaaacga aaaCGGGAAAAATCGGTTTCATTTGACGACGAAGAAAGTAAACCCGATTC GGATTTACATCGACAAGACAGCGGTTTCACTACACCTGATGATGAGGAGT TTGTCTCATCAAAAAATGGTACAAATTATTTTATAAACGCAATCTTTATG AAGAACAAAAGGCTCAACATTTGTttgactagcaaactagtctgttaatt aatcatgtcagagggcgggaacataaaggcggcgggcgtttgctaaaaTA GGAGCTGCTCACGAGAACAATAGTCTGGCAGAATTAAAAGTTgaccttga aaaaaattccgcgtaaactttcttggtaccgttggaaACGGAATTTTATG AGGTTAAACATTCTCAGAGCCTCACGTCGAGGCCCTTGGGGAAAGAAATT GgtgaaagaaaacattaaagACCCATTTTGAATATAAAATACCTTGAAAA GTGCTATCCTTGCAATGGTATCTGCCTTTTAAAACACTCAatgtataccc ctgtctcaaaaatctGGGGGGGGATTTCCCAACAAACATTTCTGGAAACC ACAATCAATTAAACAGTGTCATCCATCATATGAAATGGGTCAAGTGCAAA GCGATAGCGATAGcgctgactttcaaagactttgaatagcTTTGATAGGT TTTTAGTATAGCTGATGACCAGTGTACTGCTCAAAAACGTATCTATTTTG GGGCAAAGAAGTACACTTCAGActtgattttaccaaaagttttccccaag gGCCTCACTCATcatgaggctctgagtatgacaatctacataaaattccG CTTCCAACAGTACCAAGAAAGTTCACCCGGAATTTCTTTCTACGTTCACC CCTGTTTTATTGTATTTCGGCCAGACTacaagcaaaagttggtgagagag tgctttcagcccttgccgccgacaaaatttcttcctatgCTTACCTAGCT CATGCGCTCACGTTCAACCTTAGAATAAATTGCAAAAAACtcacaaaaat tcatttcaaatccAAAGAGAGAAAAAGTTTTTGTGGCACACTCGgaatct gatttttaaaaatcgtaAAACTTAAAGactgactctctctaattcgacgc tCTTTTAATCGAtatgctccattattcgataatatggAAAATCACCTTCA ACAAGAAACTCACATAATTGACGCTCTACTATGCAATAAGCTCCCTTACT CGATGAATATCTACTCTCAGGTTAATTTACTAATTAccagaaaaaatcga aaaattaacaagcggggggggggggggggcgtttattcgtcacctaagag taatttcacaatgaaaattgaattcaattttcattgtgaaattactctta ggtgccaaataaacgcccccccccccgccccttctttttttttttttttt gttttttttaaaaaaaaaaaaaaaaaggggggggggggggcgtttattcg tcacctaagagtaatttcacaatgaaaattgaattgaatatctagATTTT GTTCTTCTTATTCGTTCAAGGAATCCCTAAAACAGGAAGCACCAATGAAG AAATTTATGTTCAGGACGAAAGTCAATCGAAATATGGGAAAGATTACAAT ATCACCGAAGCCGAAACTTATGGTTCGAGATACTCCAATTCAGCAAAAAG TAGCTCTATCAGATACGGTGCTGGAATGGCGGATATGACGACGTCGGACG TCTCGTTGAAACCGCTCGTGTTGACCGAAACCGAACGAGCGTATATAAAC GAAGCACGATCGTTTCACGGTCGTCAATGTCGGCGCCGACGGATTCGCCG AACGCGTGAAGAGGAAGGGGAGTATTTAGGATCGGATGACGTCATCACGA GAATAAGGGAGAAAACGCAAGCCCTTTTGGAAAGACAAAATAAGATGATG CGAAGCTATCAATTATATTAATCTAGATAAATCCGTAAAAAATTCACCTA TTTCCTATTGGCAGATTcctgtaaaaaagtcacgaaaaaacgtcgagtaa agctctgattggctgaaagaTGCTTagataaacatattttttttatctaa atatACAAAGTATGaggtactttaggcgtacaaactttcgcgagcagaaa ctttcgcgcggacgaaaaattgcgaaattcacgacatttactttcgcgaa tttaacggaaaaatatttttcgcgagcattaactttcgcgaatcaagacg taaaattgagttttttctggtattttcacatgaaaaaatggcttagaggg acgaATACTTCTGgtattggcttgaaacatttgtcctttgacttattagt cttttagcaggctataAAGTGCCattaaagttacattttattcaaagttt gaagttttacagattttatattttttcaagaatttttcgcgagcataaac tttcgcgaatggcccttcctagaatttttaaagacatttacttttgcaaa aaggaccaaaactcgcgaaagtttctgctcgcgaaagtttgtacgcctaa agtaatctTTGCATGTCTTAGGCAATCAGAGCTTTACTCAACGTTTATTC GTGACTTTgttacatgaatctgctaatcgGAAAACCATGTATTGGGCTAT TCCCAAAAGTTTTGTCCCCCCCTGTGTTGATGATCTTTTTTGGCTCACCT TGATtatgtttccaaattttcagGACCCTCTtgtattttttctcattttt tttggactgttttggaccaccctggactTTCGACcccattttactgacca ccttGAATTTTgaacctcattttactgaccaccagACCACCCTAGACGTC ACATCTCTTCAACATAGGGgatacagactatttctggaatgcGCCAATAT TTCCGAGCAAAGCTTACcttgtttttaaaatattgctaTATCAACAGATT CCAAGACGTATTCAAAAGAAGTTTACTGAATCTATTCTAAAGATTGAAGA CAGTAAAGGCAAGTCGATGCATTTGAAGTAATTTATGAGTTCCCTTCAAG GTAAACTGAAAATCTGTAGGTTTTACCACAACATTGCATGTGTATTTAGT TTGTTTAGTTCATATTTATAGTTCAttgtcattttttagaaaattttttc gaaactAATTATATTCTTTTATACCAGACTGTCATCAAGCCACACTAATT AACAATAATAGCCTCGATTCCAACATGAATAAACAATATTAGCCTGGATA TAcagctttttttaatttttgatgaatTGGTGTACCGCTGAATCTTCCTA TAGTGATCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006122TCONS_00006122Clytia hemisphaericatranscript
TCONS_00006123TCONS_00006123Clytia hemisphaericatranscript
TCONS_00006124TCONS_00006124Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006124-proteinTCONS_00006124-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000063supercontigsc0000063:270587..280145 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15 0.17 0.3 0.35 3.07 2.24 0.54 0.83 0.29 0.39 0.09 0.23 0.25 0.18 0.22 0.28 104.61 101.47 0.98 1.13 1.5 1.6 1.93 1.43 5.92 6.01 0.8 0.6 0.22 0.27