XLOC_003174 (gene) - C. hemisphaerica

Overview
NameXLOC_003174
Unique NameXLOC_003174
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000054:486954..494427+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003174 ID=XLOC_003174|Name=XLOC_003174|organism=Clytia hemisphaerica|type=gene|length=7474bp|location=Sequence derived from alignment at sc0000054:486954..494427+ (Clytia hemisphaerica)
AGACATTGTACTATCACAACCGACGTCAAATAACAATATTATGAcgtcaa atatatttttaaaacaacATCAAGATGCAGCTGaatgaaatttctttctt ttgtatCGTCCTTTTCGTGAGTATCGCACGCATCTAAATTGCAGAAGAGA AGATTTTTTTCGTACCGAAAAGGAGAAATCATTTATATCATTAATTGTTG TTTatcattgtttatttttattatcaaaatatattttatcatgGATAACC TCGCACCCGCAAACGTGGTTGCGGATTGTGAGAACAGAGACTACACTTTG GAAGAAGTTCTCGGACAAGGATCGTACGGAACAGTTTACCAAGCTTCTTC CAAACGGTTTGATCGTCCTGTAAGTTAATCATACTTTTATATTCTTTCTT ATAAGTTCTTTTTTTCTGTGCCACGTATATTGAAACTGAGTTTTTAGTTA acaaaacatactatctttccaaaaattCTTAAACGTCTATAGTGATTGTG ATTGTATTCAAAATCCAAGTATAGAATCTGACCATGTTTTCTTAAGAATA AAAAACTCTCTCAAAGTGTCTACTACTTAGGCGCTCTGATATAGTGATAA TGACCTTGGTTGCCACAttaaggttcgattcccaccgACAGTGGTTCACT TGTCAAGTAAACAAACCTTCGCCCAGGTCAACCCAGGGTTGCTACAGCAA GGTTTGATTTCCACTGACAGCGGTTCACTTGTCAAGTAAAGGAACCTTCG CCCAGGGTGCTAACGGAGCGTTCATTGAGtgcatctatagttgcgaaaat gggcctCCTGCAACTTAACCAAATAGAATAGAAAAATACTAAGGCTATCT ATACCTActttatcggccaaaacttagccggccttaattttagtcacctc gtcaaaatttaatcCCTAAGGGCCAATTTAGGctatttctaaatttacaa gcaaATAGGaggaaaataggagaaagcttaaaatagtggaaaataaggaa agcttaattataaacttttaatttggcccaaatttttagtcgtttcaaat tttagtcgggCCTTATTTTTAGTCggtcctaattttagtcaccaagccaa aatttattcACTTAGGGgggactaagttttggccgataaggtatatggAA TATGTTCCTTCAAGATGTACAAAAATTGCTTACATGTGTGAAACCCTATT TGAAAAGCATTTGAAAAGTGATAGATAGCGTGGGACAGAAACTTGCAACT TAATTTGAAAACGGAATCATTTCTTTTCTAGGTTGCTATCAAGATTATCG ACCCGAAAAAAGCTGGCGAGGGGTATATGGAGTATTATTTACCTAACGAA TATAAGAGTTTGCTGGCAGTCAAGGGATCACAATATGTGGTAAGTACTAG TAATTATTATAAATTAACTAGTTAATTGTAGACATAACCCATGTGTTATA TTTGATCGGGTAATCATATTTGACACCCGTGTCTCGTAGCACCGATGGAA CTTTTCCCATAGCGGGGATAAAAATTTTTATCGAAATTATTGTTCCAAAT TAAGAATATCCATTAGGGATTGTTTTAGTGTATTTTTTACATTGATTTTC GAATGGGGATGATATGAACGTCAATCTCCCGGTTGGGCTGAAATTATAGG ATATTTTCCCACCGGGGACAAAATTTTGGCCAAATTTTCAAATCGGATTA GGATTGGGATCGGAGGATTTGTGACACAGGGATGTTATATGGCCTGCGAG AACTTTCTGATTAAAACCTTCAGGTTTTTTTTTGTGTAACTATCGTGCCA AAGTCGAAATATCAGGTTCTTACGTTGAAATTGTATTGTTTTCTTACTAA AAATCAAAAACTTTTAACTCATACTTCCTAAATTTGAAAAATATTTAGAC AAAGATGTTTTGAGGTTTTTCTCAGGATAATAGAAGGATTCAGCATGCCA CATATCTCAATCCATCTGATTATATCTTAGATTTGGATGTTTCATGAAAC CTCTAAATAAAGTTGTGTAAATTAACGCAACACGCAATACACGCAACACG TCTTTCAAATGTTCAAAAGTGCCTTACAATGTTAGATTTCCATTAAAAAA AGAAAACCACGCCGTTGTATTTCGCTGAAGCTTACGCTTGCAATGGGCTC ACTACGTGTTCGTGCTCACATGTGTCCAAAATTTCAAATTAAAACATGGA GGCTAGTTACCAGTTCTGCTTTCGTTGACAGAAGAGAGTTTTTGAACAAT GATTTTTTTCTATAGGTACAAATATTAGACGTCTTCAGAGGTTCCACAGG AATCGTTTACTTCGTCATGGAGTGCGTCGAGGACGGTGATCTATATGAAT ATTTGGAGAATGAGGCTTTGCCTGAAGATGAAGCTCAAGACATCTTCAAA CAAATCTGCTTGGGGATCAAGCACTGCTTTGACAGGAATATTGTTCATAG GTAATTTGGAAGAATTTCTGTTTGCACTGGACTGACTTAGCCCTTTGGAC AAAGAAACATTTCGTTTTCTTACTTCCGAGCTGGCAAATAACGTTGTTTG AACGTTTACCTAACGTTGTATAGACGTTTTGAATGTTAAATAAACGTTAG ATATAACGTTGAAATAACGTTTTGTGCCAGCTGGGTTTATTTGACTGAAA TTAGAATTTTCCTTTCCTGGCTGCCTTATAACGGGGGCCCCAATAACTAA AAAGTTACATAAAGATTTCCGAGGTATTGCAAACTTTTAACTAACTGAAG AACTAGTGAGTCTTCATCAAGTTAATCATTATAAGCAGTTTTGAATCTTA TATTCTTGTACTCTTTCATTTTAATCATTCATTTATTTTCAATTTCAGAG ATCTCAAGCCTGACAATATTCTTCTTGCAGAAGATGGCACTTGCAAGTTA ACAGGTATATAGATTATATAGATTTTGAAAAATAAATTCAACAACAATGC TTTCATAATTTGCACAAATGTTAAGGTCGTCTTGATAATGACAAATATCT AAATCTAACGAGGCATTTTTGATATCTTGTGAAAACCATTCTGTAGTCTA AAAACGCTAACATGCTTTCCACATTGCGGCAGAAAAAAAGGATGCACACT ACTAAAAAATACTAACGAAAATTCTATGATCTGTTTAAAACATcatcatt ttgtattttttaatttaagattttggctTCGCAAGGAATGTTGGGGATGG ATCGCTCCTTTGGGATCGATGTGGCACCAAGGAGTATATGGCACCAGAAA TCATCAAAGGTGAAGCCTGGTATAATGGAAAAGCATCGGATCTTTGGAGC TTGTAAGTCTATTTACCCATCAAGTATTCTGATTTTATACGAGAATTGTG TTGGGGTACTCTGTATCAGAGTGTGTCTCACATTTATCGTTTCGTCGTTC CTCTacgaaaatgaatttttaaataaGCCGGATAAGATATCGGATCTATG TACAGACTATGTTGGGGGTGGTGTATGCTTTATTGGTACGGTATCTTCAA GTTAATTTTAGTTGGCTTTGATCAAGGTTGTCGTAAAAACTGAGTCCCGT GTTAACACATTATTCCTTCTTAAAAAACGACTTCAATTTaagtttgtgtt ttgaaaagaataacAATACCCTCCTACCGATCTATCTATTACTAAAGCCT GAANATGTTGGGGGTGGTGTATGCTTTATTGGTACGGTATCTTCAAGTTA ATTTTAGTTGGCTTTGATCAAGGTTGTCGTAAAAACTGAGTCCCGTGTTA ACACATTATTCCTTCTTAAAAAACGACTTCAATTTaagtttgtgttttga aaagaataacAATACCCTCCTACCGATCTATCTATTACTAAAGCCTGAAT ATACATCCATTCTGAGAGCTGGTTATTCATGTGAGTcttgggggaggggg tactagggttgcattttgggggggggggggggtgccgcccgaattttgac ccttggacccttaccgggactaaaaaggagaaaacaaaggaacattttct agattttacgacccttattgggacaattttgaccaaattttaatctttcc gggggtaaaaagttgaaatctttttatttcTCTGACTCTTAGCgggactg aaatttaattttttgacttttccaacccttagcgggactttggaaatcca aaaaaggtacccttaaggacTTCAAACAGTTGAATTGTTAAAGCCACCTC GTTCGGAGGATTTTTAAGCTGTCTTTTAAATTCGTATTTGTCTATTTTAG AGGGATTATTTTGTACGAATTAGTCACCGGTCAACGTCCCTTCGACAACG AAGATAACGATAAACTTTTTCTGAAGGAACAGCAATTGGGCCCAGCATGG CCACCAAGCATGTCTATCGGTAAGTGAAACTTAACAACCACAGCTAGAAT TTCCTATAATAAACAGAACCTTTTTCGGGGGTGGAGGAATTTAATCTTGT GACATAATTGAAAGTAGAAAACCTATAAACTCTTAtctttgagaggattg atatggTTGCCCTGGAAAAATACTTTTTGACTACAAAACGatgatgaaat ttgtaaaattcatTAGAAAAAAAGGGCTATTCAGCTGATTGACAAGAGTC TGAATAACGGGAAATCTAtttgtttgaaaagttttcagATTGATTGCTTC TTATTCAAGGTGTAAGTTTTCATTCACAACATTCTAATAACCATCACTTT TATTCTAGCATGCAAGAACTTGATAACATCATTGTTGAATCAAGATCCAG AAAGACGACCGTCAATTGAAATGGTTTTGAAAAGTCCATGGTTATGTGAA TCGAACTTGCCAACAGaaaaggtaattttgaataacatattgaaaataaa atagaatcaAAAAGTGCTCAagctaattttgaaaaaaatcgaacGAAATA TCAAAAAAGTATAAAGTAATAACTTGTAATTGCTATTACGTTGTACTACC AATATAAGGCTGGCAAAAATTAAATAGCACGGACATAATAAAAGATACAA AACCCCTTAGAAAAcaaaagtacacgttttttataagaacatctaaaatt tttgaagctttcggatgaTCTTTACATAGTCTTAGTGTTGTTCCTAAAAC CTAAGAAtacttttaacatgttcttatttttaccactTTGGAAGTATTTT CGTCCATTTTCCTAATAAATTGGGTATTTTTGAGACTGCAAAGACTtaga atgtttttaacttgttcttagaattttggcaatcgaagccttatgttctt atatagtttgctcatACAGtatagaaaattttaataacAATGTCAGCATA TAATactttaaaattaatttatttgtaATTTTCAGAGCACACAACATGAA AATGTTTCATACTTACATCGATCAGAAAAAGTTCCTTCTCATATCAGTGA TAATGTTGTCAATCAACAGTCAGAGAAATCAGCTGTACCAATCACTAAAG CAGGCCACAAACACAAGTTGGAGGATTTCATCGACGTAGACAAATATGAA CAAtccaaattgaaaataaaacgacaaaaaaattcGGACAAGATTGGGAC AAACCGTCTATATATGGACGCTTTTACTTGGCAGAAAATCAACCAACAGA TTTGTTGTACAAATCgaataaaatatcattttatcaACGAAACAAGCTCA GAATGCAACAGTCATTACAGAATGGCTAGCCAAACCAATATAGCCAATTC AAATAGCAAAACACATTATGGAATACCACCCCCAACTAATAATCACCAGA CGAGATCGGCCAATTCAAATAGCAAAACACATTATGGAATACCACCCCCA ACCAATACTAGTAATCACCAGACGAGATCGGCCAATTCAAATAGCAAAAC ACATTATGGAATACCACCCCCAACTAATAATCACCAGACGAGATCGGCCA ATTCAAATAGCAAAACACATTATGGAATACCACCCCTAACTAATAATCTC CAGACGAGATCGGCCAGTTCAAATGGCAAGACGCAGCATGGAATACCACG CCCAACTAATAATCACCAGACGAGATCGGCCAATTCAAATAGCAAAACAC ATTATGGAATACCACCCCCAACTAATAATCACCAGACGAGATCGGCCAGT TCAAATGGCAAGACGCAGCATGGAATACCACGCCCAACTAATAATCACCA GACGAGATCGGCCAATTCAAATAGCAAAACACATTATGGAATACCACCCC CAACTAATAATCACCAGACGAGATCGGCCAGTTCAAATGGCAAGACGCAG CATGGAATACCACGCCCAACTAATAATCACCAGACGAGATCGGCCAATTC AAATAGCAAAACACATTATGGAATACCACCCCCAACTAATAATCACCAGA CGAGATCGGCCAATTCAAATAGCAAAACACATTATGGAATACCACCCCCA ACTAATAATCTCCAGACAAGATCGGCCAATTCAAATGGCAAGACGCAGCA TGGAATACCACCCCCAACTAATAATCACCAGACGAGATCGGCCAATTCAA ATAGCAAAACACATTATGGAATACCACCCCCAACTAATAATCACCAGACG AGATCGGCCAATTCAAATGGCAAGACGCAGCATGGAATACCACCCCCAAC TAATAATCACCAGACGAGATCGGCCAATTCAAATAGCAAAACACATTATG GAATACCACCTGCAACTAATAATCACCAGACGAGATTGGCCAATTCAAAT AGAAAAACACATTATGGAATACCACCCCCAACTAATAATCACCAGACGAG ATCGGCCAATTCAAATAGCAAAACACATTATGGAATACCACCCCCAACTA ATAATCACCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NCAACTAATAATCACCAGACGAGATCGGCCAATTCAAATAGCAAAACACA TTATGGAATACCACCCCCAACTAATAATCACCAGACGAGATCGGCCAATT CAAATGGCAAGACGCAGCATGGAATACCACGCCCAACTAATAATCACGAG ATGAATTCAGGCACGTCGCATGGAAACAGGAATGAAGGGATAGCCGGTCA AACCAACAATCTACctgatataaaaaataaaaacacaaaaaataccAACA GAAATTTTATTGCTAGAAAAAAGCAGTttattactttgcttttttTCGAT AAAAATGTCATTAGAAAATATCGATTTGTTTACATGAAACGACAAAAGGA CGTCCCTCCGACAGATTTAAGATCAATGATATCAGAACTGGTACCAAGCT TGCGTCCAGATAGAAAACCTCCCTGGTATTgtacaaaacaaataaaaatc gTCAATTTACACCATCTTGAAATGCAAAAGATTATTGAACTTTAATAACT CGTTTGTAAGACTAATTCCAAGGCTTTGGTTAAGTATCGCAAGAGGAAGT ATCACAAGAACCTCGACAATAACAGCCGTAGCTTTGTTGATTTGAAATAT AAAGTCATATAATTGTCTGGgctg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005590TCONS_00005590Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005590-proteinTCONS_00005590-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000054supercontigsc0000054:486954..494427 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.13 0.13 0.08 0.03 0.05 0.06 0.03 0.1 0.02 0.06 0.02 0.02 0.29 0.2 0.04 0.05 0.04 0.03 0.76 0.63 0.14 0.15 0.07 0.36 0.15 0.27 0.02 0 0.03 0.03