XLOC_003100 (gene) - C. hemisphaerica

Overview
NameXLOC_003100
Unique NameXLOC_003100
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000053:758445..767993+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003100 ID=XLOC_003100|Name=XLOC_003100|organism=Clytia hemisphaerica|type=gene|length=9549bp|location=Sequence derived from alignment at sc0000053:758445..767993+ (Clytia hemisphaerica)
ccattttttaactcACTTAGTCAAGAATCTCGATTTTAGTCAATTTCCCT TCCTTTGTTACTAAGCAATTTAGAATACTTTCAACCCTCgaaataaatat tcttataaaataaaacagtTTTTATTCTCAATACCAGAATTTATAATGCT CTCATATTCATCCTAAATGAATTAAAGTTTTCATAAATAAATTGTcggta aaaaaataatattgtaatatcgggaaaattttatttttaatatttttgct aTTATCATACTGCGAAGTGAAAGATTTGGTTTAACTTAACAATATTTTTT ACCCACTTGCGTGGAGGTACcatttttccttgtattttaaCTTATTTGTC ATTCTGGTCGATTTGATGCAATGGTTCAAATGAAATGTGTAATATTTTTC ATCCTTCTTGGTGTAAACTATGGTGAGTGatgattattttcatttttaca tttttccacAAAAAATATTTCGTAGTCAACCCCGTAGTCTTTATAGGtcg tacaatcatggtcgtaatattgtagaagaaagaagaaatatattggtatt ttcaaaaccacaaacgatttggaagtgctctaagttaggttggaaaggta gagttttaactctgagttttaacgctaattttgaccatgattgtagtcaT CATTCAGTTGAAATATTGACCGGGCTTTACCAATAAGACCTCGCAAATCG GTACTTGATCTCTCTTTCTACTTGAAgctaaatagaaaaataataaaaac caGGGAAAGAAGCCGTGCCATTGCCTACCTTTGGGCAGATATCGAAGAAA GCGGCCTTTGGGACTCCCCTGATTGTGGCTGCAAAGCTACTCATTTAAGC CCCTTGTAGAAAAACTCTTACAATTTCGAATGTATGGCTTTTGATACGCA GATCGAAAGTACGCGAGTAGAAGGAGTCTTAGAAATACAGTTTTGATAAT AAAAGTCTCttgaatacagttgactctctcttattcgaactCGAAGAGGT GATCTAATTTGCTCGAATTATAGAGGgactcgaattatagaaagttcCTT GAAGAGGAAtgatataccttaagggaagaaattttcgcgagaagaaattt tcgcggaagaaattttcgcggaatttaatttcgcgaatttgggtgtaatt cgcgaaatttaatttcgcgaaacacaccaaaattgttaaatcgcgaaatt aaattccgcgaaattcgattttttttcttcttcttttattttgttgtttt tgaccaggtattaccaaaaaatatggacacaagtggtttttaagcattat aacgtgtatttcttatcaaatataaacaaatatagaTAACTCCGTGATGG TTAAAAGTTAATTtaagttgataacttcttcttaatcgcgaaattaaatt ccgtgaaacttttgaaatcggctcattcgcgaaattaaattccgtgaaac ttttgaaatcggctcattcgcgaaattaaattccgcgaaatttgccattt tgaaactgtgattcgcgaaattaaattccgcgaaaatttcttctcgcgaa aatttcttcccttaaggtatcattcgaattatagaaattatAGCAAGAGT CATCTGTATGTGTTAATAGAaggatttgataaaaaattgcaGGGGTCACG AAAACCTGCATTATAGCACGTGGGAATTGATCAGTACTCATTCATGACTT CTTTGAGGTCATACAgatagaaattttcttttcaagtaCAAGCGTCAAAA GCTGATTATGTGACTAAGAATAAGCATTTTGCGAGTGCCTTTTCTGATAA TCTGAGAATCTTGAATTTCAAGTGACTACTAGTATGAAATTTTTTCTATA AATCTTTGAATGAGTTATCAAGGTGTGAAAATGCTCTGATTcatgaaaaa tgtaaattttagtaaGGTCAaacctagacgatgctatcatCCGTTAgaag gtcagtaaacgcgggaaataTATATGCGCAGGGCGTGTCAGGGTGGTTTA CGGGGGAAAAAAGTagcggtagagtttggaacaaacgctgtaaacatctc cgccactccTTACTCCGCCTCCGGGCCAACCACCGTTTTCAAATTCAACc ctttttttagtgatcttgtgcaGACGATAGGATCCTCTAAGGCCAAAcct tgatatttttttctttaaaatgtgAACCTTGAAATGACTTTACAGAAACA TTCCCTGCACGTCGTATTGAAATTTTAATCATAATAATAGGGTAATAATA ATAGGGTCATCagatttcaaaaagtaaaactcTGCCTTTGGGTGTCAAGC TTTAAAAGAAAGACTCCTTTAACACCTCGtacagatttttttctggaatg ggcctattaaagattttgtttttaaataagagtgccatcgtttgtttact catcaattttaatttataagctttttgatattgaattgacacggatgtgg agcaagactggttagaaagagaaagaaagaatttatttgtgcttatatca gcacagtATAACAGtagacagacactgtcctgacaTGAAACGTTTGTCTG ATATGCAACGGgaacacttgtgtaaaaataaaacctttgaaGCAATGTTC TCCAGTGACCTCTTTTgcataaagaaaaaatttttaggtCGAAGGgttag agtagaatctctaacctttctcaggcaagtgaagccacttatttcctatc cAAAAAGCGAGTAGAACGCGCCTTAATCATGACgatggattgtatctagc ggttcctttgtttttgaggactgtatCTTTTGAAATCTAACGATTGATTT TAGTtttaatccggcgtttgtgtgaaaaccacgcgtgggcgttctggatg ggaaataagtggcttcatttcccatccaggaatcctgagtctagcccttc gggttaaTCAATGAGAAAACCCTTGTCAGATTACTGTATTAATCATAGTC TATGATTAACACCCGCTATTCATTAAACCAAaaactaattattttttttc aaatttcaaacagTTCACAGTATTGAATGGACAGAACCTCGTGATCGAAC AGTGTACGGCGTAAACGGTCAACCCTTAACACTCAAATGGGAACTCGAAC CAGCCTCATATCAAAAGTTCTGGGCTGCCGAATGGCAAATTGCTGAAACA GTGGATAGTACAACAGCTAGGACCATAGTTCTCGTTGACAATGATTTAGG CATCATAACTGATCAACTGTATACTACTTCatcaaattttggtgaaatca CAATCAAAGCTTTAGATTCGGGATTTATGAACTTCATCATTGCCACCGCA AAAGACGAACCGTTGAATGTGGCTAAAGATGTTGTCACAATCAAATATAT TGGTATGTGATCGTTTGATACTAATTTTCCCAAACTGAAATAAAAGATAC CCCGTTTCTTACTTCTTTTCAGTGGACtccatttttaggcaaaaaagaaT TCACCggtgtaatttttttatttgtcggtccataaaaaaaacaaagcaaa acccctGAGTTTGAGTTGTCCTATACAATTTAGTTTTATGGCGTGATATA CTTGGCAAATCAATCTGCCTAGCCAGGGTGCAGTaagcagtgctgacgag tcctaataaggatgaaatgcatatgctgctctgccacccaaatctctaCC ACccgaatttcttcacatatatgtAATTCTCTCGTTTACAAAATGTTTAT ATCAACATAGGACCtttcttttagttttttaagaacaagtaaattttgac tcggctgattttttctttgaaatttccaaGGATTAAATAATAATCTAACA ACATGTGATTGTGAAGCATGTActtaaatgctccaagagagGCTTAGAAT AAATGTTTTAGTGATTTTTAAAACAGAATCGACATATTCTTatgcattct gtgaaaattttagcatcATGGACTTTATAAAAGTTTTTATAAATGTTAGT GCTTATTGtataaaatcttcttttttttcaaaaggtgaGGTAGCCACATT CAAAGAGACCAACATGGAAACGGAATACAGTATCAATGAAAATACTGAAG CTGCTCGAACATTTAACACCTCAATCGTGGTGCAAGGTGACCCACTACCA TCTGTCTTTTGGACATGGAACGACAAAGATGCTAAAGACCATGGGTTTAC AATCGTTCAAACAATCTCACAAGAAGGCGGTACGTTTTTTGTCAATAGTA CCATCACTAAATCACTGACACCAGATGATAATGGCGTGCTCAAGGTCGTG ATTAAACATGGACAACTGGGAGATGACGGACCTTCGCAAACTAAAGAATC AATTCTCGATTTGCAATGTAAGAAAATTCTTTTAAGTGGAATCTCTCAAT CTTAATCAGACGGAGATATCGGTTCCATTTCGTCCGTCCTTGCTACACCT ATACACCCCTATCTAACAGCCCGggtcaaactttttttcctcagtgggga taaaaattcctattgaaatcccgatTGGGATAGCacttctattgttccaa ggattaaaaaattcagttggaTGGTTTTGGAAGGCAATTTTTAATCATTG AATTTCGATTTGGGGaggaaatcaaagtcaattttccagtggagctgaaa atgtagggtattttcccaccggagaCGAAATTTTCCAGGGCTAGGgctcc agtgggtctgtgacacagggatgtacCTATCTACTCAACGCCACAATAAT ATTGAGGTTATTGATTTTGAGAATGATGACAAtgcattaaattttgaaat tttaactttGGTCAAATCAAAGCAACTCCCCTTTCATTTATTAATTTTGC GCAAAATTTTAAGCTGGATGTACATTTCCCCTCCTTATTTTGAACTTACT TCTCTATACTATGTATCGCAAGAGGATGTTTTGGTTTGTTTCGAGTTCGC GATAAAGAAAGAACTACTACATGacgttttataagcatacaaaaatttga aaacaggctatcggagatgcttaggtcgagggcttgacaaggctgaaaaa tgcttataaGGATGGCAATATCCCaagcaaaattttgtgaaaatttcgaa aatctgtaaaattccagccaaaatcaggaaaaaacatATTTCATAGGCTC AGGTAATGCTTAgtatatgcttaaatttttgccatatctgaggctagata tgcttataagacaATGCATAAATGTATGTATAAATGTTGCGAACCTACGT TgataagtgttttttttttgcatatcATTATGGCCTCCACTAATCaacta attttctttgaatttgtcCTCGTTTCTAAATGAAACAGTCTCAATTGTTT TTCTATGCTgcaattattgaaaattaatttttatttctttttgcactctt caaaacaaaagccTGAGTTGATATAATGAGGCTAGGGATACaatgacaaa aaattattttatcccCTTTTATTTCAGATTCGCCAAAAGACATTACCTTC AACCATAACATTACTGGAGGCACAATGTATGACAACGGCTATGTCAATCT GACTTGCAAAGCTGACAGCAATCCACCAGCCACTTATGTTATTGAAGAGA ATGAACAAGTCATTTCCCGTGGTGATGAACACAGCATTGTCAGACATATT GGTAATTTCCACCACAAAAGATCAATCAGTTATCGTTGCATTGCTAATAA CTCGCTCGGTGAAAGTTCAGCTAGTTTGGACATTAAACTCAGAAATGGTG AGTATGGCTATTCACTCTAGACTGCACGCATCCtttctgatatgttttga tataaggTGATAATCGTAtctaaaattcccgtccgagagttaccctaAAT TTgagataattttcttaaaacggCTCAGAAATCCAATGATTGATCCAACC TCTTgctattcaaatttttaatcaaattacTTACTCACCAAACAAGCTAA TTAACCTTCTGCAATATTCACCAAAAATCCAAGAACATTGTGCTAATTTG CTGTCTAGAATCCATTTTGCCTCTCTGACGAAAAACCTTACCTTGACCAC TGATACATTCATCCAGTATCACAAGGCGAATCAATTTTGCACTAAAGAAC TTGGATTTTCGATGTGGCCACTCTCCATCATTGGAGCTTAGCATTCTTCC TTTATCCAAAAATCAACATGACTTCAAATCcggaaaattttgttattttc gcTTGCGTTAACTTATTGTATTGAAAATCATATCTAATCTTTCATGTTTC AGTCACCGTGCTTTCCAAACGAATTGCTGACGAAGGTATATTAGATACAT CGTTTCCATATTATTAGACTCTTCTCTACCGACTACATGTTACAActatt tatgatatgcaccattgcaatgtcttctgagattacatcacggacccaac agctgggTTGactggttgtaagtgacgtaaaatcagtcaatacgtcactt acaaccaatcagctgttgggtccgtggaagacattgcaatggtgcatatc atgaatacacattttttattcgTGTGACAACAACAGTCTATGCTCACTTA CCCTAGACGAACTGATGAGTCAAGGAAAGGACAAAACAATATCTTCCAAA TAGATATACACTTTTTATGAGAACGTTTCTTATAAGTACACAAGACTAAA ATTTGGTCAACACTTAAGAGCAATCCGTGCTTCAGATTTCAGATTACTGA GAAAATACGTGTATCAATGCCGTTTTAAGTATGGGCAGAACACATGGAAA CTAAACTTAGGTCCGACATCTTTTACAAATTTAGAACAGCCAGAATGcac aggaaaagttttttatctGTTCCTTTGTCCACTGAGTGATATTTCTATTC CTTTGCTTTTAGATACTGATTGGTGGGTGTACTTTGGAACAGCTGTGGCA ATTGGATTATTAATCTTCATTGGATTTGCAATCCTCCTTTGTATTCATCG CAGGTTTGACAACAAATTAATTTTATGAATTGTTAAGTCGCAGACCCCcc ccccactggaaaatttggaaaatttttttttcccgaATAGAGGAAATACT CTATACTCTTTTTACTAATTTCTGCTGNAGTGGGACCCTCTCCCCccccc cactggaaaatttggcaaatttttttttcccgaATAGCGGAAATACTCAA TACtcttttttactaatttctgctgacgtcatcagaattgatcgacttta gtgagatacatctttggagaaagtttgaagacaattggaaacaatccttg agaaattcaatttgttagtttttctgacgtcatcgattatgacatcataa tcagtttttacggtttttcgcgaaaatcagcggaaaatcaattaggttac acatcaggttagaaactacatcatagtaccatTCATGtgcagtcatttgt ttggtcattatCTGTCGGCTAATGTGATCTAAAAagtatggtaattttaa gacatgtcATAACATACCCAAGGACTCGCCCTAAATTAACTTTATTTTTA TCCTAATTTTAATGGGAAATTTTctacttcaaaaccatcccactggatcT TTTGACTTGAGATTAATTGAATCCCACGAAATAAAATCCACTGGATCAAT ACATTGATAAATATCAAAAGTAATTGCTTTACACGAGCTTTTACataaaa accagtaaattttaGTTTAGGCTGGCCTGTCCTCTAAAACCatataaatt tcattaaaatatcaaaattgaagcaccgtattacttcgaataaacaccct GGGTGTCTATTATTTCTTAGTGTTTGAGGAGTGGTATTTCATTCCAAGGG CATTTAAAAGGAAACACCCTCCATGCGTTTATTCAAAGTTCATTAATTAT TATTCTCGGTTTTtctaatatttgaaaatgaacaGTTGGATCGAAAGTCG TACAAATTCTAGCGAAGAAAGTATAAGGTATTCGATACTGACCGctattt cttcaaaattaaaaaaagaaattaatgtTCTTGTTTTCTTTAGACGTGTA CGTAGCTTGAACCTACGTAGCGATATTGATAAGATGAAAATGCGTACGGA ATACGGTGACGGTCGCAACGGAGCGCGATCGAATGGCGCTAATCACGTAT ACGATATGAACGAACGGGGACTACGAGGCACGGCAACACGCACCGCTACT CAATTACCGCAAATTGATCAATCAAAGAAAAGACCGGAAATACCGTATCC TTCGGAATCAACCCGATCAGCTAGCGGTCAAATCAATGACGGGTTTGATC TTAGCGTGTACGATACcattggaaaataaaaacaacattatttttttatg ttGAAGGAAAAATCTCGTACTTAATCTACTGTGGCAGTGTTGCggtaggc tgcacacatcccctctgataagttttgatataggggatgcgaatcaggct cacaaaaccgttccgaacttagcaaaaaatctgctaaccataaaaagagt tgaatgatagagaactttgattgacagtttgtcgtcttttgttatcttga gagttttgtttgctaattcaattaatttcgataaacaaaaagaNAGCTTG AACCTACGTAGCGATATTGATAAGATGAAAATGCGTACGGAATACGGTGA CGGTCGCAACGGAGCGCGATCGAACGGTGCGAATCACGTATACGATATGA ACGAACGGGGACTACGAGGCACGGCAACACGCACCGCTACTCAATTACCG CAAATTGATCAATCAAAGAAAAGACCGGAAATACCGTATCCTTCGGAATC AACCCGATCAGCTAGCGGTCAAATCAATGACGGATTTGATCTTAGCGTGT ACGATACcattggaaaataaaaacaacattattttttatgttgaaGGAAA AATTTCGTACTTAATCTACTGTGGCAGTGTTGCGGAGAGTTTTTTGCCAT TGGTCAGTAGATAAGATGCGTCCGTTGACGATAGCTACGATACAACGACT GAGATCTTGTCCATGTTTACCCATGTATGGTTCTGTTCTAATTCAAAACA CAATGAagaatttctattggttgaaaataATACTTGAAATTGAGGAGCCA ACAAATAGATAGAGACAAAGAACTTTAGCCAGGATCACAGTTGACGCTTT TTCATTTGATTCTCAAGTAAatgggaattggattttcatcgaataagggc gtaacaaatagtagagcgtcgcTTATGAGAGTTTATTTTTGATGGTGGCC TTCAATATTACCGAATAatggagcttatcgaatagtagaacctcgaatta gagagcgtcaactgcatAGTAAAGTTTCAGaccttttctttattttttgg gaTAATTTGGAGACAGCAGAaccattatttttattttgaaattctcGGAT TGTAAATAGCATGTATATAAGATTTTAGAGTAGCCTTTTGtttaaagttg attttataTCCAGGCTAACTAGCATATCAAGGGAGAATCGAGGCTTTTTG GGTTAGCTTTATGAATTTTAAAAGcaatttcatttagaaattcCAATCTA TTAACCTCTCTTAGTGACATTTGAATGAAATAGAAGGAAGATTGCTTGTT TAATCGCAAGCCCTCCTCGTCTGAATTTTCCCTTGACCCTCTCATTATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005441TCONS_00005441Clytia hemisphaericatranscript
TCONS_00005442TCONS_00005442Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005441-proteinTCONS_00005441-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000053supercontigsc0000053:758445..767993 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12 0.19 0.14 0.06 2.19 1.39 0.66 0.33 1.03 0.71 0.62 0.61 8.86 7.01 2 2.16 1.27 1.49 8.45 11.3 3.88 3.67 1.43 2.81 4.18 6.77 0.62 0.4 0.57 0.28