XLOC_003030 (gene) - C. hemisphaerica

Overview
NameXLOC_003030
Unique NameXLOC_003030
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000052:127321..135418-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003030 ID=XLOC_003030|Name=XLOC_003030|organism=Clytia hemisphaerica|type=gene|length=8098bp|location=Sequence derived from alignment at sc0000052:127321..135418- (Clytia hemisphaerica)
CTGATATGATCAATTAAAAGCCTTTTTCCTGCGATCACGTGACTAAAAAA ACAATTGTTTATGAATGGACGAATTTGATTGGCTGTTTAGAAAACACACA ACATAAAAGTAAAGTTGATGGATGATTATAAAAAAAGACAGAAGCGTCCT TTCGGTTAATATCAAAACAAAACTTTGCATCGCTCGGTCATAGTTTTAAG AAAAGAGGCTTAAAAAGCACAACCTCGCGATTTTTGTTTATATTTTGAAG TTTCAGTGCTGCTGTCTTCACTACGTACGTTTTGTATTGCAATCAGATCG TTATTAAATCAAGATGGAGTTTTATATGATTTGTTTTTTGTTGTTTTCAA CGTGTTTATTGGTTGTTGTTTCCAAGCCTGCAAAACCTAGTAAGTAATTC ATGTAGATTTACATATTGTATCTCTGTATGGACTAATGCTTGAACCCTAG CCCAAAATAGTCTTTTCAAGGCTTGCTAATAACTATTCTTCAAGCCATAC AACTATTTTTGTATGGACTAATTCGTAGCTTGATGCTTGAATCTTAACCC AAATTAGTCATTTTCAAGGCTTCCTAATAAGCTAATAACTACTCAAGACT TACTCCATACAGTATAGCATTTTTGCAGAACAATTTTGTAGTCTGAAACA ACGTTAGGATACTATGCTATGGCCTTGGTGAGAAAGATGAAGGATTTTCT TGGCATGAATTTGAATTCTTCAAGAGATTAACCAACGGGGAAGGAAACTC GACATGACTGGGTCCTAGCATATGATAAAAATCTCATTCCATCCAAAACC GTTCTTTTAATTTCCTGCTAATTTCTATTTTTTATCAAAATAAAAAAAAC TTGTCATAAATTGCAACATTTAGAACATTGTTACAATACATCAATAACAT GTAATTAACGTTAACTGCGTTCATCCAAGCAAATTGATAAAAAGCTATTG CATAATTTCTTAATGTTTTGTTTAATATTGACTTCATAATTAATTGCAAA TAAAGCGTGCTGTTTCTTGCACAGTTCCCTTATGTCGGGTTGGCTTTTCC AACCCAACCTTATACATGGTGTCCGAGAAAAAAAGTATAATAGCAAAACA TGTTTTGAGGACTAAAGGTATTTTATGTACTTTGTATTATTGCGTATTAA CAAAAGATAAAGAGAGAAACAAACTTTTTTTCCAGACACCCTGTACACGT TTTTTTTTATAAGAACAAACTATATAAGAACATAAGGCTTCGAGGCCCAA AAATTTAAGAACATTCTAAGAACATTCTAAGGCTTTGGATACTTAAAAAT ATGCATTTTCTTAAGAAATTACATCAAAATGCTCAAAAAATACTGAAAAT AAGAACAACATTTTAAGAACATTTTTAGGCTTCAAATCCAAAAAACTAAG AACATCCGAAGGCTTCGAAAATTTTTGACGTTCTTATTAAAAAAAAAACG TGTAGTCAAATTCGAGGTAAAATTCAACATTTAAAAGCGAGGGAACCCAT TTTTTTGTCTCAACCAAACCTTTGGGAAGGGTAGCGGAAAAACTATAAAA ATGCTTTAAAAAGGAATATCTTTTTCATTCAGTTATGAACGGAATCTACA CCAAATCACAGGAAACACTCAGTTTGCGCAATTTATAGATCACAAAATAA AACATCTTTTCTTTGGTTTACCACATGAGGTCCAAGCATCAACGATATAC TTTTCCCACAAAATCCCCTTTCTTCTCTAAAGCCCTCATTTTAGCATTTC TACCTAATCCTTTTTGTATACACGAACAAACTATATAAGAACGTAAAGAC TTCGATGGCCAGAGAATTAAGAGCAATTTAAGAACACTGCAAACCTTTGC AGACTCTAAAACACCCAATTTCTTAGGTACTCGCACAAAAAAGAGTCACA AAATGGTGAAAATAAGATCACTTTTAGGTTTCAAACTAAAAAAGTTTAAG AACATCCAAAGGTTTCAAAGATCCTGGACGTTCTTATAAAAACGTGTACG CGATGTACAAAAACAGGTCTGTATAAAAGAAGGTATGAATGAACGAATGC TGTTAAAATTTGCCTCTCCTCTATGTTTTAAATGGAGAGGATTTAGTACA TCAACGTTATATCAAAATTGTTTCTGCTAACATCCGTTTCGTACCTCATA TATACAAAACAACAAAAGCTTTATATTAAGAAAATGTTTTGTTGTCTTTT TAGATAAGTATAGGGAAACGGTGTATATTTTTGAAACAAGTGTTTGGGGA AAGTTTGTTTTAAGATTTTTCATCATAATAAAGAGCTATCAAACTCATTG ATGGATTGTTGATACGGAACTTCTCATAAGCTACGGATGTCCATTGTATA AGTAAATCCTATTCTCAATTTCCCGATAAACCCTTCCATTGTGACAACAA AACTTCATTGATCGCTTCTGTAAAGTGATCCCACAAAACTGGATCAGGAA GTGCTCACATATACACAATCACAATGACAGAATACAGCTTCTTAAAGCTG AAAAACCTTTATTTGATGGCAAAAGATTGAGTTAATCTCGTTTGAGGTAT ATCAATCTCATGCAAGCGCATTGACTTTCGCAGGGTGCATTTTTCTTACC ATTGACGTCAAAAGAATAGAGCCCACTTCCGGACCATTGCAAAGTCGCCC TACACTGCATGCTATGGTTTATTGACGAGAGCCTCCAATGTTATATAAGG AAACAGGATCAATGTTAAAATTTCCAATGGGTAATGTATAAATCAGACCT TAAAATAGACGAAGAAAGTTTGTGATTGTTTTAAAAAGTTTGATGAAAAA CGAAAAACCGCTAAGGCGATATAACGATTAAACAAGGGTATTAAATAAAA AAAAATATTCTCACTTGGGAGACTTATCAAAATGTAACTGTCCAAAAATT TCATTTTTTATTATCTGTTGATAGAGTGTCTCACCGTATATTTGAATAAC CAGGAAAACATATATCATTTTATCATCAAAACATCAAAACAAGTGAAATT GATAGCCCCCTCTTAAAGAAGATTTATCAAAAATATCGTGGGTAGACAAG AAAAATCAGCAATAAGATTTTTATCATGTAATCTTTAAAATGAAATCAAT ATCTTTATGTTTACCAAAACAGTAGAATTGAAAATAAAACGTTCCCCAGA TAACGGAAGAATTTCAAAATATTGGACACCCAGGCTAGTTGTAAAACATA TGATTGTGTAAGTTAGACCATCGGCTAAATACTTCCTAAACGACTTAACT TGACCTTTACGTATTTCACCCGGATTAATTTCTTTTAAAGTGACAGTTAT TTTTTTTACTTTTTTCGCGGTGTATTAAGAAAAAAGCGGCGAATCTTAAG AAGCTAACGGTCTTACATGAAAAGAATGATTTTGAAAAATGGAGTGTTTT GATCCCCTGTCAGTAAGTTTGAAAGAGATGTCAACTTTTTTATAAAGTAA GAAAAATCATTAATAAGGTGATGACATACAGCACATTCAAACACTTTTGC GACCATGACCACAACGTTGTTTTAACGTTTATGTAACGTCCATAATGTCC ATGTAACGTAAGATGAACGTCCAAACAACGTTGTGTCTCGCTAACCATAC TGGACAAGTCGCAGGTCATGAGATTTTTAGCCATTCTAGAAATTATTCGA TCATTGTTTAATTCGGGAAATAAAAAGTCGATAATTCGTGGATGAGGGTA TTTAGTCAAAAGAAAAGAAAGCAATCAGCTTCATTTGTTGAAAGACCACC TCTGGTTAAAATCAAATAATCTTATTAAATGTCGAAAGAGACTTGAAGCG TCCAATCTTTCCTCTCATCCCCTAGGTAATCATTTTGCATGAACAAGCAA AAGTCTTAACTACTTCATAATCCTACCAACTGGTATTAACATTCCATTCC ACTTTCAAAAAACTGTCTGTAAAAGTCATCATCAAAAACTTGATAAGCCA CTAATAAGACAAATACAAGTTGTGACCTTTCTACTATTTGAAGTGACCCT CGACTGATTAAAATACTGCTTTCAAAAAACTATATATTTCATGTATTTTT GAAGGAAAATCCATCTCCAAATCCTTAGAACACAGCATGAATAAAGACAG CAGCAGGATAGATTTCATGTATTTTTGAAGGAAAATCCATCTCCGAATCA GACTCCTGAGTGTTCAATGAATTCATTGTTTAAAGGGAAAATCACGTGAA AAAGTAAAGAAAATATGTATTTTTGAAGGAAAAAATATATAAAATCGCAT TTCTTTTCTGTACGGGAAAAACTTGTTAATTTTGAGGGGGAAGAAGAAAT CAAACTAATGACACATTTTCTTTCATTTTACAGTTCTCATCGAAGGAGAC ATCGTCCTCGATCCGAAATTACGAAAGATTCGCGCTAACGCCATCATTCA CGAAGAAGGAGAATGGAGTTCACATAAACGTGTCAAACGGGGCAACACGC TCACCAACAAGAAACCTCATGAACATCGATGGAAAAATGGTTTCATCCCT TACAAACTATCATATGAATTAAGTAAGTTTTGGAATGATACACGTTTTTT ATTATAAAAACACATAAAGGCCCGGCGGAAGCGGGGAGACTGGGGAGACT TCAGCCTCCCCACTTTTGAGCAAATGAGATTTTTTTGCTCGAATTCCTAG CAAATTTTATCTCATTTTGAGCCTTCAACACACTTTAACGGTTGTTCCGC CGGGCCTGAACATCCAATATTTTTGAAACCTTCGGATGTTTTGTATTAAC TGTTTTGAGTTTTAATCCATAAATTGTTCTTAATATGTTCTTATTTTCAT CNTTACAGTTCTCATCGAAGGAGACATCGTCCTCGATCCGAAATTACGAA AGATTCGCGCTAACGCCATCATTCACGAAGAAGGAGAATGGAGTTCACAT AAACGTGTCAAACGGGGCAACACGCTCACCAACAAGAAACCTCATGAACA TCGATGGAGAAATGGTTTCATCCCTTATAAACTATCATATGAATTAAGTA AGTTTTGGAATGATACACGTTTTTTATTATAAAAACATCCAACATTTTTG AAGCGTTTGGGTTTTTTTTATTAGCTGTTTATCCATAAATTGTTCTTAAT ATGTTCTTATTTTCATCATTTTGAAAGTATTGAGAAGAAGAAATTAGGTG TTTTAGAGTCCTCAAAGCCTTAAAATGTTCTTAGCTTGTTCTATATAAAA ACATGCTAGACAGTTATTTCATTACAGGACAGACTAAACTTTTTAGTCGA AACAAAAATCTCTCGAACAATCTCGTTTAAAAATGACAGTAAATCGTCTT TGCGAGATAAACATCTTATATGCCTATTGTCAGTCTGCGATAAGAGTGAA AAGCTGAAAAACGAGGAATCTTAGAGTAATCACCTTATCTGGGTAGTAGC TTAGGAAACAGTTAGAGGTGACGTCAGCAGACACACGGAGTCGATAAAGG TCGACTTCATTATACATTAACGGTAATTGTAATTAATGATTCGAATATTC ATGAACTATTTTTTCCTTTCTTTCTGTAGGTGACATAGCAAGAGAATCAA TCAAGGAAGCATTTTACGAAGTTGAAAAATACACGTGTATTCAATTTTCA CCGTGGAAAGGAGAAGATGACTACGTGGAATTCGTAAAAGGCGTTGGGTA AGTTTCAACATCATACATTTGTAGTCCCTAGCCTGGGACCTTTTCTGGTT TACCGCCTGGTTTTCCTAAAAGATTTTGCATTCAAATACCAGAGACAACG CATGCGTACTTTTGATGATTCAAATATTGCACAAAGATAAGAAATGACCT ACCCTGGTAGGCATCTCTAGACCAAGCTGTAAATAACAGAAATGTCAAAA TAAGAAAATAATTTACAGCTCGGATATCCATGCTATATATGTAGTCTCTA GTGTGGGTGGATAAGGTGTGAAATATGAGTGCTCAATATTACCCCTTGTA CAAATGATCAAACACTGAATTTCAAAATGGCACTGGGAAATTTCTTCAAA AAAGGGCACAGTTATTTGTCAGAAGTGCAAACCAAACGTCAGTTTTAAGC TAAATAACATACCTAAATCAAAACAAACTCCCTGATATCTTTCAATGCAA ATACATAGAGCCCAGTGGTCGAACTAAAACAAACAAAATTTGATCTTATC TTGCGGTTTGGTGGTTGTGACACTTGGTGACAGCCAGCCACGAGCCCCTT CTAATCGCACTCTTGACTTGTGACGTAATGAAATGGCAGAACACTTAAGA GGCCTGTCTATTCCACTTCAAAACACTCTTGAGTTGCGGGATTTCATCTT AAGAGCATTTTATTTTGGTTCCTTCTACGGGAAGCCTTATCTTATAGCGT GCCGAAATTTCGCTATCATCTTCTATTAAATTTTCGCTTAGAACTGCTAG GCTAGCATGCTAGACCACTAAATCAGACACAGACGACTCCAGTCTATAAC AAATTATTAATTCTCATTATAGATGTTACTCCAGCGTTGGAAGACAAAAC GGGCGACAAGTCGTTTCAATTGGTGAGGGTTGTGAAACAACAAAAACTGT AGTTCATGAGTTACTTCACACTGTGGGAATGTTTCATGAGATGAGTCGAT ATGACCGTGGTTTATACGTCAAAATCTTGTGGTGGAACATACAAAGAGGT GCCGAGAAAAACTTCGCCGTCTATGATCACGGTGTAATCGACTCAATGAA TTTTCCGTACGATTTTGAAAGCGCAATGCATTATTATAACAACGAATTCA CTAAAAATGGACATGACACAATCCAGTCTTTAGAGAACCCCAAATTAAGA ATCGGTAATTATCATGGCATGAGTAAAATGGATGTCAAAAAAGTATACCA GTTTTATAAGTGTTACAAGAAGAAGGAACGTCCGCAAAAGAACGAATGCA AGGACAAATATAATTGGTGTAAGAAATATGAAAATCATTGTTCCACACAG TGGTTTNCAAAAGAACGAATGCAAGGACAAATATAATTGGTGTAAGAAAT ATGAAAATCATTGTTCCACGCAATGGTTCGCTGAAAGTTACTGTCAGAAG ACATGTAAAGTTTGTTTATAGAATCCATTATAATCAATTATCATTTATTT TTAATTAGGTAGAATTTTTCAATTTTAAAATCTGAAATAGTAGTACTGGA CTTATGAGTTTTAAGATTCGGTTAAGCTTCAAAAGCTTTTTAAATTTTAA AATCTTTATTTTCATGATAATCATGACGTAATGTTTTATACGGAAGCACC CAGATTAGCCAGGGCGTTTGTCATTAGTTTTATTGTATAAAATTCAAAAT CAGTGGCGAATACCCAGTCTTTTTTGGTTGCTGCTATATAAAACATTACG TCATGAATATCGAGAGTAGTAGTACTGAACTTATGAATTTGAAGATTCGG TAGAGCTTCAAAAACCAATTCTTAAACGCAGGTCATTTGAATTAAATGGT GAAAATATGCGTATGTTGTGAAATCCCAGCTGGCACACAACGTTGTTTCA ACGTTAATCTAACGCTCACAACGTCCATATAACGTTAGATTAACATTAAA ACAACGTTGTGTGCCAGCTGGGATGCTTTAACTAATGTTTGCGTTTGCTA AAAGTTACCATGACTACTATCGTTCAGAAAGAAACAATTTAATGTAATAT AGAATAATGTAAATATTAAAAAATATATTTAGAAACTATACATATGGAGA GATTTGTACTATATCGAGAAGTATTGTAGATTTTATTGCCTGGTATCGCC TATATGGGTGTCGAAGTTGATATTTTTAAGGCGACGGCATCTATCCACCA AAAACACACATCAAATTGTTTTGGTGTATGGCTTATTTTATTTATGGAAA AGAGATTATACATTTATATATGCTTTGTAAATAATATCGGGTGCTTATAT AAAAATGAAAACAAGTTGGACAAAAAACACAAAAGAAACATTACAATTGA TAATTTGCGCATTTTTTATTGTCCCCTTTTGCTGAAACTACTGAAGTGGG AACAACCTTAGTCTGGAGCTCCATACTCTCTATTCAAACTTACACCGCAT AAGCAAAAATCCCATCAGAAGCTACTCATTGAGAGTATGGTATTTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005326TCONS_00005326Clytia hemisphaericatranscript
TCONS_00005325TCONS_00005325Clytia hemisphaericatranscript
TCONS_00005324TCONS_00005324Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005324-proteinTCONS_00005324-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000052supercontigsc0000052:127321..135418 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.18 0.27 0.21 0.26 0.37 0.2 5.45 5.13 9.25 9.86 3.23 65.39 14.29 12.02 7.05 5.92 10.49 12.75 19.31 19.83 17.23 15.71 7.63 13.88 7.31 7.19 25.57 19.75 19.69 10.91