XLOC_002836 (gene) - C. hemisphaerica

Overview
NameXLOC_002836
Unique NameXLOC_002836
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000050:478067..480456+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002836 ID=XLOC_002836|Name=XLOC_002836|organism=Clytia hemisphaerica|type=gene|length=2390bp|location=Sequence derived from alignment at sc0000050:478067..480456+ (Clytia hemisphaerica)
cgccgaccgaccgaccctctttttgggGTAGCTTgacccgtaaaacaaca
aattaaatttgtctcgcctaatatcataataatatatgaCACGGGTTAAA
TGaacattatatttatttttaattaattgtgATGGATATAGTGTAAAAGA
TGGTATTATTTACAGTTTTTTAATCATTCCAATAAATATAAAGatcagtg
gcgtggtggcaaGGGGGGCCAGGTGGGCCAGGCCCCAccagcggagccct
tttgagaaggggcgccAAGAAGGATTTTCCAGACGCCCCTATCAAAAGAT
TGGCAACTGAAAAGCCAAAAATCGCGCCCCTTATCACcttaaaatttctt
tggctcgcttcgctcgcacactctTCTACTAAATGTATATAGAGAGAGGG
CaccgaaaacaaaaaaatctccaaaaaggGCGCCAAATTCTGCTTGGCCa
ccccagaaaaattttcccaccacgccactgaaAGATTCTTGATAATATGG
GCCAATTCAAgttcgaaatggatcatgggtaatcagagCCGATTCCACAC
TGGGCAGGTGAAAAAACTACAAAATGTTTAACCAATAGGAAGAGACCATT
GGTCCTGAttccctttttttcttttctaccgTGAAATTCAATTCTTGATA
ttgatgacgtaatgttttatatggAAACACACAAAAACGCGTATGACAAC
AGTTTCATTGTTCtaaatcaaaatgtttttcGGGTGTTcggtataaaaga
ttacgtcatgaataacAAGAAGTGACCTGTAGCGAATAGCGTCTAATAAA
GATGGCCAAGTACTGCAGTTGgattctctttaactcgaacctgtATATAA
CTCGAACGTCTCCTTCACTCGAGAAAAAGTTTTATCATCCCTTCTGTTAA
CCAAGCATTGTGTACAccttccataactcgaaatttccttaactcgaaca
aaattGTGTTCCcagtgcgtgttcgagttatggagactccactgtagtaA
CCTAGtgattactctcgggtacctaatagtcgGGAGGGTTGGAAtaaggg
ggggttggaaaaatctcaaaacttaataagcagggggggggtcggaaTAG
AAATTATGGGTGGTAAATCTTTttaaaggaggctaatacaacAAAAGAGg
ggactttcaaaaatattttaataagcgggggggtttggaataacaatgtc
ctgggtggaaaattttcgaataaTCAGCGGGGgtgacggctattaggtac
ccccAGAGTAAAACGACGAATAGCTGTGTTTTTAGGAATCAATTTTATGT
TTGATACCCAATTTGATAGCTCGTATCATCATTAAATGTGTGTCTGTAAA
ATTACTATTCTGAAGTTCCGGCATCAACGGTTGTAATTCTCTGGCTGGTT
CCAATAAGGTTTTTCGAGGAGTTGGTAAAAGTGTTTTACGTTTCTGGTAA
CTTTGGTGTAATAAATGGTCCTTTATTGATAATTGAGATTCTAAGATATG
GTGATTGTTGTGGTATGGTAATAATGTCTTTGGTTGCTTCCAGTATGGTT
TTCTTTTGttgatcaattttttaaaagtttgaatCTTTTCAGTGTAAGTG
CTCGTAGATTCTCTTTGGTTCTGTTGTGAGTATCTTGGATGATGTAATGA
GTTTGATGAATGAACCTTTACGGAGACGATTGGTGAATGCGTTGTACTGT
TTGTTAAAATAGTATGTCCAGTTTTAGAATCTAATAACGTCCGAATTTTT
GAGTAACGGTTATTATTTCCATGTGAGTATGTTGTGGATTTGGAAGCTTG
GAGACTTGTTGACGTTGAGTTAGTGCATTGTNCATCTTGGATGATATAAT
GAGTTTGATGAATGAATCTTTACGGAGACGATTGGTGAGTGTGTTGTACT
GTTTGTTAAAATAGTATGTCCAGTTCTAGAATCTAATAACGTCCGACCTT
TTGAATTCCTGTTATAATTTTGATGTGAGTATGTTGTGAGTTTGGAAGTT
TGGAGTCTTGTTGACGTTGAGTTAGTGCATTGTTTATAGTCCATTGTTTG
AATGGCGCTTGTTTCTTGATTTTGTATAGCGTTTATTGAAGATGGAAAAG
AAATACAGTTTTTCACTATACGGTTCAATGGTTGTTGTTTCTCATTTGAA
GGAGACTTCTTGGTGGCTAAAGACCAAGGATCTGTTACATTCAGGTTTGA
ATCTTTATCATTGCCAATCTCCATGGTGACACCAAAAATACGAGATTGAC
AGACAAAATATGCCTTCCAATGGAAGTAAAATATTGTATCTTCAATTGTA
TCAGTTCTAGTGTATCCTCAAGAAACAAACTCTCAATTTTTAATCCATAG
AAACTTCCTAAAGGAAAGTAAGTAACTTTTATCTTTATCc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005003TCONS_00005003Clytia hemisphaericatranscript
TCONS_00005004TCONS_00005004Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000050supercontigsc0000050:478067..480456 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.38	0.41	0.56	0.52	0.8	0.72	3.08	2.84	1.61	3.1	1.72	1.03	1.02	0.96	0.07	0.17	6	6.09	0.27	0.31	3.89	4.11	1.37	1.97	3.45	4.71	0.5	0.46	0.27	0.56