XLOC_002790 (gene) - C. hemisphaerica

Overview
NameXLOC_002790
Unique NameXLOC_002790
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000049:645162..655628-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002790 ID=XLOC_002790|Name=XLOC_002790|organism=Clytia hemisphaerica|type=gene|length=10467bp|location=Sequence derived from alignment at sc0000049:645162..655628- (Clytia hemisphaerica)
CCCTGCGGGGCCCAAGGCGCCGAGTATGCACCCGGCACAGTGACAAGCCG TTACTAGCAACCCTGACCTAAACAATCCCAAACAGCAAAACCCCCGGAAA ATGTAAAATGTCGGAATGAGCAATAGCCGATCACATTTTGGAGGTTTGTC TTTTATGTTTTCCTTTGGGTAAAAGTGGAACGGAGCCACCCAAATTCATT TCATAAACAAAATTCAAAATGGCGTTCTCTGCAGCAAGATCACATGGAAA CCTTGTGAGCATTTTGAGAAGTACAGTGTCAAATCTTTGCTTGCTTCAAA AGGTTGAGAAGACAGCAATCGTCTGTGGATGTAGCTACATTCAGACACGT AAATTTAGACCTTATTCTGTCATACCAAAGAAGTATTTGAAGCGAAAAAA TAGAGACAAAAAAGATAGAGATGATGTTTATTTTTTGACTGACCAGGTTG ACCCAACATACTCCGTGGATGATGCTGTCAATATGATAAAAGCTTATGAC TTGTTTGGTAATGAAAAACTTGATCTATTGCTGAATATGAATCTTGGAGA AGGGAAGGTATACATAGGTAGACTTTTCTATAGTTCTATAGACCTTTTCG CCTTTCCATCCCGCCATCTATCTTGCAGTCTTGAATTGTATGCAAAAGTA CAGGAACAAAAAAGCTGTAGTTTCTATTTCTATTTGGTTGAGTTGCAGGA GGCTTTAGAGGCCTATTCTCGCAACTATAGACGCTTTCTAATGAGCGTCC CGTCCGCACTTTGAATTGACTATCACCCAATACACCGTTTAGGAGTCTCG CTATTTCACGGTACTCCATTGCAGAGGCCCGGTAAAAATGGTAGGTAAAA ATGCGCACTTTAGTACTGTGAAAGGTTANNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNAAGAGGAAAAGAAGTTATGATTAA AAGGAGTTCTTTACCTACCGTTTTTCTGCTATGTTTCCTTATGAGAACCA GATGTTTACCTACCGTTTTTTTGCGGAGAAGAGTGAATTTTCCGTGATCG CTAAAATCAAAACAATGGAAAATTGGATTGACGCGTGCGCAGTCGACACT CCTAAACGGTGTATTCCCCTCACATACGATGTTCGGGCCAAGAGACCCTA TCAATTCTTTTGGCCCGAACATGACCCTAGTCATTCAGGCCATGTTCGGG CCATGTTCAGAAGATTCCATATTTAAATTGATTCAGCATGTCCAGTCAAA CAAAATAAGATTTGTCTGTTTTGTTTATATCACTCAAAAAAACNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGAGAAACCAA GTTTTTCTCAAAGAAAATGTTAAAAAATTCAGTCCTGAAATTACACGCCT GTTTAAATCATGTTTTCAAAAATTGGCCCGAGTGTGGCCCGTGCGTGGTC CGCGTGTGGCCCGAATTCTCGGGCCAGCTCAGGCCATACTCGGGTTAACC CGGGCGAAGGAACGTTCACTTGCCAAGTGAACTGCCGTGAGTGGGAATTG AACCCTGGCCGCCTGCACAGAAGCCAAGGTCGACTACACTATACTACGGC ACCTTTTTTGGTTGGATTTAGTTGGAAAATATGCAAAACATATGCAAGTT TACACAAAGATTAAAAGACAACAAAGCATTTTATAAAGAAATATTACAAT TATTAGAACAATAAAAGATGGAATTTCGTAATCCAAGAAGAAATATTTAC AGAACAACAAAAGCCTTCTAGAAATTTGTTTTAAAAGACAGCATATTCTG TTTTCATGCCATTAAAAAATTCCACGATGACGGAGTACACACATCAACTT TCAAAACACGCAAACTGAAAGCAGTAATTATCAGGGTGGCCACTAGTCCT GGAAAGTCCTGGAAAGTCCTTGAAAGTCCTGGATTTTGTTTTAGTCCTGG AAAAGCGTCCTCAGAAAATTGGTTAAAGTCCTGGAAAAGTCCTGGAATAT TTTTCCTTGTTAGTCCTGGAATTTTACCTTTCTCTATAAGCGATCAAGCG TGAAGGAATTTGTATTCTAATCAGATATTTATTGCTTTTATTTTCTGTAT TCTAATATCTGTGTTTGTAGAAGTCATAAATATTGTCAAAATCGTCAAAC ATAATGGCATACTCTCGGGTACGGATGGACGGGGTTTGGAATTAAGCGGT TGGAAAAAATCTCAAAATCTAATCAGGGAGGTTGGAATTAAAATGCCTTG GGTGGAAAACTTTGGAAAAGCAGGCTAATACAGAAGAATTAGGGCAAAAG AGGGAACTATCAAAAACATTTCCCCAAAACTTAATTAGCAGGGGGTGGGG TGGAATAAGAATGTCATGGGTGGAAAATTTTTCAAAAAGTTAATTAGCGA GGGGTACACTTATTAGGTACCCAAGAGTAGTTTGGCTAAAAGCCAAAAGC ATTATCGTCTAAAAACTGGTTCCTACATGAGACACTTATAAAACACCAGC TTTATGAATACACCCATTGAAGTTTTTCAAAATATCACGTCCTATCTTCG AAAATATTATCTAGTTGCGTTTCAAAGAGATAATCCTATGTTTCTGTTTC TAAAAAAGTGATATTTTCCAATTGTTGATGAAAACGATGATGCACCACTA AAATTGTTTAAGTTGGCTTTTTGGGGGGAGAAAGNATATTATCTAGTTGC GTTTCAAAGAGATAATCCTATGTTTCTGTTTCTAAAAAAGTGATATTTTC CAATTGTTGATGAAAACGATGATGCACCACTAAAATTGTTTAAGTTGGGT TTTTGGGGGGAGAAAGGGGAAAGGGGTGCCAAAACTTTTTTGTTAAATCT TATTAAAAGTTGGACTTTGTGCGTCTTAAACTGCGCCCTGAAATCAATTT TGGTGAAATAAGTTTTCAAATCTTTCATGCTCGCTTTGCTCGCAATAAGA TTTTGGTAATTTTTTTGAAATCTAGTTTTGCAATTTTTTTTGACAATCTA GCAGTTTCGAATGGTAATCTTAATGTGCGCCCCATGACCAATTAGCTGAA TGCAATTTAAAACATATAACCCAATTTTTTTCACTCGAAAAGTAATTCGA AATCCGTATTGGTTACTTTAAAAACAAAAATACAAGAGTAATGTACGGTT AACTCTCACTTTACAAAATCTTTGTCGCCTCAAAATATCCTCAACAACTA AGACAATTTGTAAGATTCTTTTTAAAGCTATGTGATTGTCTATGCAAATC TTCTTTATTGGCCCAGCTAGCTTTAGCGTAGTGGGCCTTTCATTAGCANN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAAAATTTGG CTGAGCCTGGATGTGCTTATTTTTTTAGCAATTTTCAGTCTAAAATGTTC TTAAATGCGTTCTTAATTTTTCGGACTACTTTAAATCGACAACATCATGC AAAATAAAGAGCTCTTAAAGTTGGTAAAATTTGGACAATATTTGACTCTC GATTTTAGAATATCCATCCCTAAGTTTGGTTAAAACTGCTTGAAAAGAGG AAAGAATTGTAGTTTCTTGTCATTTTTTTCCAAACTGAGGCTGGGCATGT TCTTACGATGTTCTTAATTTTTCGATGAATTTCAGCCTAAATGTTCTTAT AAACTGGGTTCTAATAAAGAAAAAAACGTGTAGTACGTTTTTCTTCATTT TAGGAATATGTTCTTTTAAAAAAGTTGTTTTTACATTTCTCTATCATGTG AACAGTTCAGTGAACAGTTCAGTGTTCAGTTGTTCACGTGCTAGGAACAA AACACTTCTGTATATAAGATTAAATATTTTGATTTATTTCTCATTGTTGC TAATAAGAGATAGGCGAGTGGTTTAAGGCGTCTTTGGCTTGTACTAGCGA CTTTAGGCTCAAATCCTCTCTGTTACTTAAGTCTTGTTCAGTTCATATTT TTATTCGCTGGGCCTTCATGCCCTCTGGTCTTCTTTTCTTCTTGGTTAAA ATCAAATTGGCCCATTCTCTATTTCGTTGCTTTGGAGCAAGTTAGAAAAA GCTTTGCACCTCATTTTTGCGTTAATATTTTTCACATACATAGCTCAGTT CCGAGAGAAAATGCTTTTCTTTTAGGATAAAAAGTCCTGGAAAATTTTAA AAACATCCTGGAAAATTTCTTGAAAAGTCCTGGAATTTGACTTGATTTTT TGAGTGGCCACCCTGAATTATGATGTCACACATTCAGCAGGTTCAGATCA ATGTTTTGATTTGATCGTTTGGCGGTTCTATTCCCAGGAGAATAATTTAC CGTCAGCCGAATAAGGAATATTTTTGTACTTTCGCAGGTGATTTTTCAGC TTGAGTTTATGTCTAATGTTATGGTTTTTTGAAGTGCTTGTTCTAAAGAC ATGAGCGAATTTGATTATTTCTAGTTTTCAAAAGAAGCAGATTTATCTTT CTTCTACAAGATTACACTTTAATATAATGCCAATTATGCATGTAAGTTTT ATAATAATACTTGCTTTTTGCATATATTTTGCATACTTTCTAAGGGAATT TCACCATGGCCACCATAATTTTTGCATACAATTCAATATGGCAGATGGAA AGGTGAAAAGGTCTTTTTCCATACTATTACTGACACACAAGTGTTACGCG TAAGCCAAATCGCGTACTACGAACAACCTCTAAACTGCCGAGTACAGGAG AAAAAAAATTGAAATTCAAAATAGCGGCCAAGCCCACGCTGATAACTTGA AGGCAGCATAGATCTCAAACCTCAAATCTACGCCGGAGATATCCGGCGCA CAAGCCTCAATTTCCAGACTGGATTGCAGCTCAATAAATCAATGAAATAA TTTGAAATAAAAAGTAAACAAACCTTGAACCTTTCATGAATCCAAATAAA TAAAAGTATTCATCTAAAGTGAAGATTACATTTCAAAATAAAACGATTTT CAAACCAACCTAAAGTCAGTGTCTGCCAACTAAAAATTTCTCTGCGGGGT CACTGGCAAGGAGTTACGACTTCTGGTATAAGTCTAAAATACCAATCAGT TTCATTCTGGAAATAGAGCAATTATGGGCTCAAAGTGTCAAAAAATAAGA ACAGTAGACAGCAGTAGAGCCTCTTCAAAAGTTTACTGGTTTTCGTAAGA AATAGCTAATGTTAATTTAAAAGATGTTGGAGGAGTTTCAGGGTGAAAAA ACCTGCCTGAATCGGATACCAAATTAGCCTGGGTAAAGTAATTGGGTTTT ATGTGCATGAAGATAATGGTTTCTATTGATTGTTTGTTTCAGAATAAAGT TGCTGTCTTAAAAGGTCTTGTTCATCTCCCAACACCTGTCACTGAAAGTC AAAAAGTTCTTGTATTCGCTGAGGTAAGACCAATTATTCTCACCTTTCCT GATTCAAACAGTTAACTCAAAATGATTTAAAAGTAATAGACACTCTGTTT GTAGAAGACAACTTAGTTTTTTCTGCTTGTGGATTATTTTAAAATAGTTT TGGATTCCTGTCAGGAAGAATGAATAGAATTTTTTTTTTTTTCAACATGG ATCTGTGCTAATGTGAAATCTTACTAAACGATTTGTTTTGGCTTGTTTGT CTTAATTGAAGTTAGTTGTATGATTGTGTTGTTAGGGTGAAGATGCAGTG AAAGCAAAGCGAGCCGGTGCTACGTTCGTCGGTGGAAAAGAACTTATATC CAAGGTAAGTAATACCCCAAGGTCACCAAAAGAACAAGCTGTTTGGTTGA AAGGGAAGGGTTCCAGTCTGATCACTGATTTTAGAATTTAATCTCAATTA TCTGGAAAGAATTGCGGTTAGAATGTGTATATAACGAACCTATCAAATAT AAATCAAATAAAAAAGACACAATGTCTATGTTAAGGTTGCTAGATGGATA ATCCAATGAATAACATTGGGCGATTGGAGGGAGCTAATTGAAAATGAGCA ACTTCCCTCCAAGCGATCTCTTTATTTCAAATCTTTACAAAATGCTTTGA ACCTTAAAATTCAAATCTGGAAATCTGAGGTCACGGAATATCTCAACATA CCTTCGATCCCTTCATTCGTTGACCTATGAAAATTAATTGAAAAGGCTTC GAATGAGATTTTAAAGACTAGGTTGGAACTTGTTGTTTTACTTTTATTCT GAAAATGAGATTTTTCCCTCTAAAGAACATTTGATTTTTTTGCAGGTTGA AGAAGGAGAACTGGAATTCGACCATTGCATTTCCACTCTTGATTTTCTTC CCAACATTAAACATCTCCCAAAAATACTCCGCAACAAAATGCCTAACACA AGGCGAGGTAATGCATCTTTTAATTGTTTAACCCTGTTTGTTAATCTTAT GACGGCTTACTGCTTTTTAAAGACACAAGTTTTTAACAAATTTCACTTTA ACCACAAATATAATTTTCATGAGATTATCATTCGGTGAAGTAAGCGTCAA TCGCTAGGGTTATATTAAGATCGTCTCATCTTCTTTGGAGAAGTTGCATA TGAAAATCCCTCAATTTAGAATTTGAGGGCAAAAAAAAATGTTATGTGAC GGAGGGACGGTAGAAATGATATTGTGTATCTGGCTTTAAAATATTTTGCA AAGCACCACTGCAGATTTGATATCAGACGACGTAGATACTAAGCAGAGTC TATTTATATCCTATTATTTTTCTTGTACCGACAATGATTGGCTCTCGGTC CGGAGTAAATACCTTTGCGTTTTTCCTTATATTTGCTGTCTTATGATTAT ATCTCCATTAATATAATATGTCGATGTTTTATGGGTAGAATGTTTTGAGT TGTTTACGGAAGATTTCCTTATTATATATGCAGGTACTGCAACAAATGAT ATCGAAGAAGCCTTGAAAATCTTCAGTCACGGAGAAACGTATATGGCGGA TAACACTGGGAAAATGAGACAAACTATCGCTCTTGTAAGTTCTTTCATCA TTATAAGTTTACGAGTGAATGTGTGTTTTGAGCGGTATTCTTTGTAGGCC TTTCTTTATTTGAAGATTAGTTTCTCTTGGAAGTGGTGTGTCCAAAACAA AACTGATTTTGTTTTTCTTCGTTGTTTTAGTTTTTTTATCATTAACAATT TCTTTCTATTTTTCTTGTAGTCCAATTTTTCGAAAGAAGAGATCGAAGGA AATTTGAAAGAAATCATGAAAGCTGTCGATTCTCACAAAAAAGCTGCTTC TTTAACCACAGGTACGTAACTACACCGTGTACACTCGCCATTGCAAAGCG TACTATAATTAAGGCGAACCCCTAAATTTCGATGTTGTGCCTAAAATGTT AAAAGGGGAATCTGCGATATACATAGTCTAGGGATAAACGTTTTTTTCTG CATTTTTAAACGGCCTGTGCAAGCAATCGCTGCTCGTGTGCAAGCAATCG CTGCTGACAGAGATTACTAGCATTATAATAAAAGTTAAAATCTTTTTCTC TTGTTTTTTCAACAGAAAAATTTTACAAACATGTCAGCTTAGCGTTGCCC GCTGGCCCCAAAATCGATTTGAAAATTTCTGAAGTCACTCCAGTGTAAGA AAAGGTATGTGATTTCGTTTTTCATTTGAAATCAACGTAGATATATGTTT TGTTTTAAATTTTTAAATTTTTCCAAAGCAAAATTAGCGACCAATTTCTA ACAAAGTATAGTAAGGATTGATTATTAATTTTTTATTATCGTAAGCATAA ATTGAAAACAAAACAAAAGTAAAGACTGCACTTGATAGACAAGGAGCCTT GTTTAGACTGCTTTTTGCGGATTATACTCAATTACGTCGTAAAACAAGAA AACAAGTTGTTTGATAAGTTTAGTTACTTATTTGCTGCATGATAGTGAAA GTTTGTTGGAAGTGTTTCATCAGCCTTCAGTTTGTTTCATGCTCAGCAAA CACGTATCTTTACTCTGCTTGTAATACGTGTAACAAAACAATGTTTGGTC GACGTGTCTCTACCGCCTTCGACGCTGGTTCACTTTATCAGTGGCCACTG TTTCGCACAATATCTCATTTCTTGGCGAGGTAACATCTCTTGCAGTGGTT GTTAGATAAGAAGGAAAATGAAGAGTTTGTTCTCGTTATTTGCACTTTGT GTGTTGTGTTGTTTTGTTCGTGGTGAGACAGAGGAAGTCACCATTGAAAC TAACGAGGATGACGGACCACAACCTTTAGTTCTGGACCCACAAGTTGCTG ATGAATTACGTAAAGAACGAGCTGAAGAAAGGAGACACCATAAAGAAGCA GTGGCTGAACACAACAAAACAACTGAAGCAAAGCCTGAAATCATCACATT GTACCGGCCAAAGATTTGTAAACGACAATCTAACCGTGGTGATTTAATGG TAGTCCATTACACCGGATGGTTGGCCAAGAGCGGACGCAAATTTGACACC ACTATTGATCTGAGACGTCGTTATGCACCCTTTGAGTTCGTGGTTGGAAC TGGTTACGTCATCAAGGGATGGGATAAAGGTCTTATGGACATGTGTCCTG GAGAGAAGAGAAAGTTAGTGGTACCACCATCGTTAGGTTATGGAAAGAAA GGACTGAGAGGAACTATCCCACGTGAGTTGTTGTTCACATTCTTTTCTTG TTTAGTAGTTATAGAATTNGGGGGGTCCTAATAAGGTCCAGGGGTTTGGA AAAATGAAACAAGCGGGGGGGCGTTTATTTGGAACCTAAGAGTATATGGG TTGGAGGGGGGACTTCGAAAACAAAATATTTTAAAGGGCGCCAAATTTTG GCTTGGTCACCCCACCACGCACCCCATATTACAACAATCTAATCCTCATT CGAAATGAGGTGACAAAATGTCCTTCAAGATTGCCCACCTGCTTTTTTTG CTTATTGATATTGACTTTGGTATTTTGATTCAAACTTTGTTTAAACCCTC ACACGAGTGACAGTGCATTTTTCTTGCATATTTTCACTGCTTCCATAAAT CTTTCATCCCCTTACTTTCAACAGTTATTACGGGATTTTTCAGTAATTTT TCTTCTTCCTTTTTTTCTACAGCCAATTCATCGTTGATTTTCGTTATTGA CTTATTGGACTTGCGTCGCGCCACACCCAGTTACGTGCCCATCGATCTCT TCACATCACTCGATAAAGATGGCGATAAAGCACTGTCCCGTGACGAAATC TCCGATTATGTTCGATACCAATCGAAGATTTATCGAAAGAAAGACGCACC GATGCCATCGCACGACGAACACGAGAAGATGGTGGACGAAATTATGCAGA AAGAGGATAAGAACGGAGATGGTGTCATCCAGCATAACGAGTTCAGTGGA CCCAAAATCCCTCATGGTGGTGAACTATAAACATTTTTTTCTATCTTAGT CTTTTTTTGTGTGTTTGTTTGTGTAGTTTGATTCATTTTGTATACTTTCA TTTCGATTTTTGTATTTTTTGTTCACTTCATCAAAAAAAGATATCAAATG TTAAATCTCAAGATTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004930TCONS_00004930Clytia hemisphaericatranscript
TCONS_00004929TCONS_00004929Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004930-proteinTCONS_00004930-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000049supercontigsc0000049:645162..655628 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
92.35 88.23 52.38 48.55 76.09 68.03 193.95 204.19 107.14 47.14 216.33 221.82 167.42 151.46 165.02 277.3 200.22 188.54 18.88 14.3 132.21 126.89 123.84 108.26 100.1 122.88 26.86 15.57 25.85 29.04