XLOC_002761 (gene) - C. hemisphaerica

Overview
NameXLOC_002761
Unique NameXLOC_002761
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000049:546875..557984+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002761 ID=XLOC_002761|Name=XLOC_002761|organism=Clytia hemisphaerica|type=gene|length=11110bp|location=Sequence derived from alignment at sc0000049:546875..557984+ (Clytia hemisphaerica)
TTTCTTCGTGTCCCTTTAAAGTATACTATGCTTCAAAATTGTTCTATTTT TCTATTTGATATTGCTCAAACGAACATTTGATGTGTCAGTAGTGCGGGCG AGCGGGCTGACGACGAATGCAAACGAAACACATGGTCTAAAATCTCACTA CGATCTCTGTTATTTCTCTCTCGCCCTTCAATATTTTTGATAGATATATT TCAAGATGACTTACATCGAAAATTGGGAAGATTTTGCCAAAGCTGCCGAG CAACTGTTTATTGAAAATCCATCGCAAGTAGGTACTTTTTCTTATTGCTT TTTTCCagccaacctcgttccctgcgtacNaattttaacaaatgacccct catttttctcacaaaggtaaggactttcaaatgaaattagtttggttttc aaaatttgaggggaaaattttgacctGTCCACCCTAACTTANTGATAGAG CGCTAGATAATACACTGGCATTGTCTGCTTTTCCAATGCGTAAGAGAGGG GGATCttgcatcagccaacaccagggtattctctggcgtcaataaGGGGg caatctaaaatatgttctgttcgtGTGGCCAGACCGGACGTCGACTCACC TTCACAAAACATTAATCTCGAGTCAGACAAGTcggaaaaatgtcagaaaa gttttttgatagcTAAGCACTTCTTTGAATATCATTTGCCACAAGTTTTT CTTTANttcccctcaaattttgaaaaccaaactaattttatttgaaagtc cttacctttgtgagaaaaatgaggggtcatttgttaaaattggttaaata gttccaaagttattccattttcaaaccacgaaaaaaccaccttttcaaGG AATCGTCTCCCTACCACGCGCAACCAAGAAATGACCTTTGGACAGCACCA AAAAACAATNgaacgaggaagaatttacaaaaatgaacttcaatgcatta gtacttacctttaaatcatccaaatctgttcattcttttttttaaatcaa ttagGAATTATCAgagaaacaagtaaaaaaaactgcatccaggtatctat tttctttccaaagatattcatgtttttcgacgtcaaggtgaaaacgcgat ttagcgctgaccacggcaccgNgttaaactttagcttatcgctaatgagc tggaaatgatagctaaaaacaaatttcaccactagaaagctgaaatcctc agctttcagatggtgtatggtgcttaaacgaaaaaatccgcaatcttatt aaaaaaacgcaatttcttcttgtttttcaaaattccagacggcctgtaga ttttcaaataaagcactttgtgatagattgtagcctaatcttaccctggg tttactaaaaaaacNNNNNNNNNNNNNNNNNcaagaagaaattgcgattt tttaacaagattgcggattttttcatttaagcagcatacaccatctgaaa gctgaggattttagctttctagtggtgaaatttttttttagctatcattt cgaGCTCATTatcgataagctaaagtttaacagccatcgggccgattttc Nttcaatgtgggtcgagaattttccggtgccgtggtcagcgctaaatcgc gttttcaccttgacgtcgaaaaacatgaatatctttggaaagaaaataga tacatggatgcagttttttttacttgtttccctgataatttctgattggt ttaaaaaaaagaatgaacatatttggatgatttaaaggtaggtactaatg cattgaagttcatttttgtaaattcttcctcgttccgttCAAAAAATCNa gatttggatgatttaaaggtaagtactaatgcattgaagttcatttttgt aaattcttcctcgttccgcgcaaaaaatcccgacgagtgcgcaccctact tAAGGGGTCGTCGACAttcgactttcgaattttttaacggcatttggccg ttaaGGGGGGCAGGGGGTCAACCATGTGCCGTTAAGGGAAGGTAGAAAAT CTCTTTAGGGGTCAACTCACCACATATCAATTCTTTTCAcctgaaaatat tgatttttgagacgtttattccatacaaatgttactttcagttagggaaa ccatccaggatcctgtcattctataagccagcaaaaactaaatgacactt gtaaacttaagtttcttaccattttccattgaaaacaaccaaaaacattg ctacttcccaaagccagagaccaaaacaaattatcttccaagattatggt gcccttttggatctattgttaaggccaacatggaaagagttgcggaaaga caaaggcgctcgctgcgtcgagggtggtaacgccaaaacgcccaatatga tcttcaaacagaaggcgagttagttgccgcgcgagttacgttgTGCACTC CACCACAGCGCATAACGAAGCGTGtttaaatgaatatcattaattataag aatatcttatgtgcttactttcagtaaacttcgagtgcttcattaaagat gaagaaggtNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATAAAAAATGcac tggataattttcattgtaacagtttgatcaatcatcgctgaaagtttgaa aaagtttttccgacgcaaaagaaattgtcagccaattaaaaaagcacagt gtgcttatacttactatgtttgctacatcgtctaggctaaaaaaagtgcg aaaagacgccattttttattgagtgacgttatgatttttttgattgcggc cgcgtacaggaactcgccaaatgttcctaactgactttccatatttcttt tcctccttttatcaACTAAGATCTGCTAAAGTCACATACCTCAAGTATTC ACTTCgctattttttagaataattttatcCAAAACAAACGACCCAATGTT TATGTTTGTGTTCCATTTGTTTAGACGGTCTGcgcggcccttgaatttcg cagacggtcggtcttttttctttgaaatgccgCTATTCTATTGATTATga ttacggagataattaattcacgcaactttcagaaaaaagtttagaaatta tctccgttatttttaaaatgtaaactgagcgAAGCCGTAGCGATATTAAA GATGGTTGACGAAACaatgatgaaagtgaaggagaaaatttggagtttca tcgatttttgacaattttttaactttagagaaTTTGATGGCCGCCGTTAA CGtagaggggggagggggtcagaaccataacggccaaatgccgttaaaaa attcgaaagtcgaatgtcgacggcccttaacccacattgagtcccgtttt agtttttttatgtatatacccttattgaaattttcaagtcggAATTCGGC GATTCAgtaagtaacgtaaataaagcctgggatacactgGGACAAGGTTG GCTTTTTTCATACCTTTTTTGGtcacaaaattttgattttgcctCAAACA TGCACCGTTGAAGCTATATACAATTTTGAATTAGCGTTATTGAAAGATAA ATATATATTAAtcgtttttaggattttataGTTTTAGGCATACTGTATCG AGGGGGTCAGAGTTCagcccaaaaaaatttcaaatttccagATGTGggtg atgaaaaaaaaaattcccctgGTGGgtcgcaaatttttttcttcacatta ttagattttttcatgatattcatgacataatgttttctacggaaagaccc tgGTTTTTGTCAGTAGATATTTAATTTAGATAGATATCGATTTTATTGAT TACAACCGtccccgggggggtactagggttggcgaatgaggggtatgtgc ggacgggacctccgaaaaccaactgatttttgctgaaaaagtgaccctta gagagactttttgaatttttttttccgatttttgaaaaaagtcataccct tagagagactttattacaaatattttctatggaaatcaaaaaatttccta aaaatcctgaattttccgacccttagagagactaatttaaaactttctga tttttccaacccttagagagactttgaaaggtgaaaaaaccgaccgttac cgtccgcacatacccatcatccatttttgccttttggtctttccgtaaaa aacattacgtcatgaatatcatgaatattcagtttgaaaaattttttttc ctgacagcacaaaaaaagtttcttttttgcggccatttgactttcaaaaa taaattcaccCGGCTGATTTCCAGAAGATACCTAATTTGGAGAGTAGTAA TCAAATTAGGAGATGCTAAGGAGTATGCTAAAAAGAAGAGCAGAAACTTT GACCTAAATCTTTTCAGGTATTGCTTCGATCAGCATTCAGAAGactaaag aaactttttcttagtCAAGATTTGAAccattgaccaaaatttcaagtaat ttctcTGGCGAGTTCTCTGAAAATTAACATCCTCAATAATCTGCCATGCA GAGactaaaattttgcaaacacAAGCCAAAATTTTTCTCCACGAAGCGGC GCCCGCTAGGTACAGCACAAATTTCAAATTGGGACTGGCTATTTTTCGTG CAAGAAAAAGCATTTCATATTTccatttggttgagttgcaggaggcttta gaggcctatttcgcaactatagacgcttactaatgagcgtcccgtcagca ccttgaactgactacccaattcccctcacattgCATGGGTTAACCCGGGC GAAGGAATNtggatttcattttggtaaaatcgcgatcttaaaatcttttt ttgatccagagttataaccatttaaatttcaaaacaaagttcgtcttatg actCTTANgaatgttcacttgccaagtgaactgccgggagtgggaatcga accctggcctcctgcacagaagccaaggtcgactaccactataccacggc acCTTATGGTGTGGTAtgctaccttaaaggaagaaattttggcaggaatt taatttggcggatggccaaaaaagttttttttagagggaatttaatttgg cggatggatgaaaaaactaaatttggcgggaatttaatttggcggtcgct taaaaatttaaccttaagatggcgtcaagacagcgaaaaaatagcaaaaa caccttaaaagagatcatattttcaaaatgtttaatttggcgggaattta atttggcggatggcgggaacttaatttggcggatttcagccaaatccgcc aaattttctttccgccaaaatttcttcctttaaggtaattaGCACATTTT GAGTGGTTTTCCCTCAGCCAAACTCGATGAAATTCAGCACAGAATCTCAC TTGCTTATTAtttacattttgaaagtgataagATGNaactgaaaaaatca catttaaatttacttttttatcgatatttttacagaatttaggatttaaa gagttaaaatcaattccaaaaaaaatcctaagagacttttttagttcgat ctattgggaacatattattgaaattattttttcaaaattcaaaagctatg ggtgactttaacttctttaaNTCTCTggtaagtgaagaaattttggcaga aatTTGAATTGGAGGATCAATGAAAAAgctaatttttgcaaaaatttaat ttgacggatgACGGATTTTTAAATCCAAAATCAAGGTGAAACCATCCTAC ACAAACACCCTATTCAACAGACCCAAGGCTGTCTTTAAATCCCTCAAAAA ACAGGGGAGCGGTCAGTATTAAGATCTCAAATATCGCGCTTAGTGACGTT GTGGTAACACCgggaaattatttttagtttcatcCTGTTTCATCaagtac taaaataccaaaaaggttGCATGCAcaggaaaactttgaaaattattgGT TTACTTAacgtatgtgtacaccttttttccgattttttgttaaaaaaatt tttttcagtcaaagtggaagaaaagttactggatttcattttggtaaaat cgcgatcttaaaatctttttttgatccagagttataaccatttaNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaattcttaagattttaa ttatatcctgcccagttttttaaattcagctgaaacttttaccattagaa agagaatattattggctttcagaaaatatatactttttatatattattat ttattGTGTACTTTTTAtacataaaaatttgttgttctaaagatatgatc aattaaagagaatgtgaacacataccttaataaTTCACACAATTCTTGCT ACGTATCTTGCTATCGTATCGTATTTTTTCTCTTCAGGCACGGTTTTGCA CCAAATATCGACATTGCGATGGGAAGTTGGTCATCAAGATGACAGATGAT AAAGTTGTAAGTACCTTTTTAAGTTAACTTTCTGCAATATTGTATTATTG GTTCAAAGCGTAACTTCCTTGAGCCAAAAGTACTTCAACTGGAAAagatg aaaacttttaaaatttctactcataatacatgttttttcttttataagca ttgcacttataagcatatctaggctcagatatagggaaaatttaagcata tggcaagcattacttgagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttacggattttcagtattt ccctaaatttatgctttagatttaagcatcccctcaagcatttttcagcc ttattaagctttcgacctaagcatctccgagcctgttttcggatttttgt atgcttataaaataaaaacatgtagatattgacgtcaaaaaggctcattt ttccaaaaatatgaatgacgccaaaattcgcaaaaagGTTGCTAATTGAA TCTCTCCTTCCGTTTTTCAGTGTTTGAAATACCGTACAGACCAAGCGCAA GACGTGAAAAAACTGGAGAAGTTGAATAATGTGTTAATGAGACATATGAC ATCCAAATGAACCAATGGCTGTAGAGAACTGAACGAATCATTCTAAACGA GGCGAGCAGCGGGATAGTGTGAGATTCCCTGCAAATCATTTGACGATAGT TGCCGCGTGTTTGCTGAATCATGATTGGCTGGCTGGGTGTGTAGTTGGTA TGAAATCACCGAAAGAACCAAACAATATTTTATATCTTTTCTAGGGAGTG ATGGGTGTACATAATTATTTATTTCTTTGATTTAAAATCTGCTGAAATCA CgggaaaaatattcaaaattgcTTTTGTCTAAACAAATTCTTATCCGTTG TTAAAGTCTGTTCAAGAAAAATTGGCAGCCCagacattttttaaacattg ttcTTGAGAGAAAGAATCCTCGCTAATTCAAACatttattattcaaattt ttatttcagt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004875TCONS_00004875Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000049supercontigsc0000049:546875..557984 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
114.92 109.53 84.06 84.87 92.48 73.68 140.4 144.79 63.61 66.92 38.7 38.17 32.63 31.97 43.86 40.58 66.82 51.72 19.31 26.56 44.53 41.63 102.57 78.51 27.03 33.24 40.73 35.44 74.36 75.12