XLOC_002748 (gene) - C. hemisphaerica

Overview


Name	XLOC_002748
Unique Name	XLOC_002748
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000049:203050..214916+

gene from alignment at sc0000049:203050..214916+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_002748 ID=XLOC_002748|Name=XLOC_002748|organism=Clytia hemisphaerica|type=gene|length=11867bp|location=Sequence derived from alignment at sc0000049:203050..214916+ (Clytia hemisphaerica)
TTTTGAACTTTTATGACTTTGGTTGGCTGTTTACGAACAGAGTGTTGAAC
AAGGGTTTTAGAAACATGCATTTGACATGGAAATTAAAGCGAAAGCTAAC
AGTATCGATTGGCATAATATACCAATGTCTTTATTGCTTTGAGTACTCAT
CGACTGCAATTTCTGCTTTATATTActataaaaactctttcaatgTCGAA
AATCCTAAATTTTATTATGGATGCTCAATGGCAGCAATATTTCTCAGCGC
TATCATTTCAAACTACATATGTGGACGAGTGATGGATAAGACAAGAGATT
TAAGGAAGGTTGTATTGAATTTATCGTTATGCAACATTCTTGGTAATCTA
ACATATACACTGACTTGGTCGCCCTGGCTCNATGGATAAGACAAGAGATT
TAAGGAAGATTGTATTGACTTTATCGTTATTTAACATTATTGGTAATCTA
ACATATACACTGACTTGGTCGCCCTGGCTTCCTGTTTTGGGCCGCTTTGT
GTGTGGTATTGCAACTGGAATTGGTGCTGCAGTTACAGGTAAATAATTGA
TACTCGTTGGGTATCATACTTTcaacccctgtctcagtgacccggaaACG
TTAAAACCCACCGGGGTGGCTGTATGAAAATAGTAAATTTCACCgggtct
gaaaatttctatcatCGGGGTTAGGGTCAAAATATGCCAGAAATTTTGTC
ATCGAAAATAGTTCCGTCTATTGGGTGGTGTGTTTTAACATCGATGGTTT
TAAGTGAATTTCCACTTCTTTCTGCACCAAAAAATAAatgagttttattt
tttgatgcaGTTTGATGGCTCCctgaaaattctttgaaaaaaaacaacat
acaaGTGGCTTGCACCGACTGGAACAAATCTCGAATTGATTAGAAGCATT
TTTTTAAAGGTATCGAAAAACTGAAGTTATATGGATAAAAAGATGCCTGT
TTTGGGCCGCTTTGTGTGCGGTATTGCAGCGGGAATTGGAGTTTCATTAA
TAAGTACATTTTaagggaaaatttcaaaaatgaaattcacTTGGCATAAT
ACCTTTAGGATGGCAGTTCAAACCTAAATAGTCTTGCAAAGTTCTTACAC
CGGTTTATACAGTCCCCGAGCGAAACAGTCAAGTCGGTTCGTGGATCCTT
ATAATCCCGGAGAACTAATGAGAGAATACTGTCTAAAATCATCCTAGAAT
ACTAAGAAAATTATTGACTCCATCGATTTAGCCCgaggtccacttaaagc
ttttttatagactggatagCGCGATTAAGGGATTACTTCACTGGActcgt
catcaaaaattattagaaagcaaagttcagccagaagtagactctagtct
actaTCGATTTAGTTTTACAAAATACTTCATTTATGTTTCATTCTTCTTT
TCCCAGGAGAGTTCAATCGCATTTATAAGAAGAAGAAGGAGTTGGCACAA
ATGCTATCGTTGAAAGAACTTATCTCGACGACCTGTATGGCACTCGCACC
ATGCACGCCTTTGTTTTTCTATGGCATTCATTTCCAAATCGGTTCGTGGA
AAATCAATCAAGATAATTTCATTGGCATATTTCTTGCTTCAATTACGTCA
TTCATGTGGATCTTCTCTTATTTCGGGCTACACAATTTGACCAAGGATCC
GGAAAGTCCTTTCTCTGATTGTAACACTATAAACAAGAATAATAGTAATG
CAAAACCATCCAATGATGACAAACTATGGACAACAAAGGACATTCTAAAG
GATCGACATCTAATGTTATTGTTGGTCGCTGAAGGGTTTCTAGCTTTTCA
ATACTTTCAAATGGAGCTCGAAATCAATTTGATGGCAGTTGAATATTTCC
ATTGGCCAATGCTGCAACTTGGTTTAATCACAAGTATTGCTATTATTGTG
TCTACTGGAACTTTGTATTTGACTCAGAAGAAACTCATGGGTTCTGCTTT
GAATATATTCTTTCTCTATGTTGTTGGTTTGGTAATTATTGGAGTTCTAG
AATCCATTATTTTATTTGGTACTGTTACAAAGTTCGATAAACCATTGCAG
CATGCAGTTATCTTCACCTCCTTATTCTTTAACATCGTTCAGGGTTTCGG
ATCGACAGTTTACTGTCAATGGTTGATGTTCTCCATAACTCCTTCACATT
CCTCGAGTATCGTCGAATCCCATCGATATATCATCGCCAGAGCTTTGGCG
TGCTTGGCTTTTTTTACTGCCAGTTatgtttatgatattttgaagTATAT
AATTCCAGTCTATAGTTTAATtacttatattttaattttgttattgttgt
cgAATCGGTTTTACTATGTGGAAAGAAAAAGTACAAAGTGATCAACAAAC
TTtgattatattcaaatttaacTTCTTACAACTGTTGATGTGTGGCAATG
AACGAATCAAACTATTTTCAGAATTAACTGTACTGGCATTGAAGAGTAAT
TTAGCTAGGCTACACgttgtaaaatttttgaagcattaggatgttcttaa
ctttttgagtttcaagcctaaaaatgttcttaaattaaaatcttattatt
ttcaccattttgtgaccaatTTTTTCCTTAAGAAAGCCATAGTTTAATTa
cttatattttgattttgttattgttgtcgAATCGGTTTCACTATGTTGAA
AGAAAAAGTATCATGTGATAATAAACCTCCTTATCATTCAAATTTAACAT
CAAActatttccaaatcttttccGAAGTGAAAGGGACCTTTAAATTCGGT
GTTTCTCCTCATCAAGacaaaaatgtgaaagtttGGTCGCCCGATTCGGA
ATTAAATGTTCGGTGGATCGGGAAATTATTTTCCGCGtaaattcttgcat
aagccGTTTTATCTCTGTTATATTACGCCACGCAATAGTAGGGGGAAATT
TGTAAAATCGCTCGATTTTTTTAGTcaaagcacttgttatacatttttgg
aaagctaaggggtaggggaatcaaaataacttgggtgccaattttgcttc
ggacactttggtgtgatctTCTGACAAATACGACagtctcgggcaaaaat
catagggtgaaaaattagtgaaaattttagcttgagaaaacggaaacctg
ttgtatatttttggaaagctctcaaaaaNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNattcccctaccccttagctttccaaaaat
gtataacaagtgctttgactaaaaaaatcgagcgacctcaaaaaaacgaa
caaatttccccctactaaaacTTATCAGATAGTATTTGCGGTATATAGAT
TCTAATTAGCTCCGTAGTATTTAcacaggaaaagttttttgattcCCTAG
GCTATGGAAATGTAtatttccagatctggaaatcTAGATTTTTCCCTAAC
CAATCCCTAACTAGGGAAGGTGCAACAGCTCCCTAGTTACGGAAATGAAA
TTTCCCGATCTTATGACTACCTAGGGATGTTGAATTTCCCTATTGTTGAA
AAGTGCTTTTCTTGAGCGAACCCCAATAAAACCCCATAGGGTTACCCATA
TTCACGAATTAAATCCTGATTTATAGAACGAAATTAAGaaagaaataatt
aaatgtattcgatcattctgtgagcattggttcgatagctctcattcgtt
ctgacatgtacttgcgctactttgagaatcccggcacttttgtcaatttt
gtcacaacagtgaagctgcactagagagccaacttaatgacctcaaaccc
ggctcaccgatccactgagcccttgcgacgcaagtccattgcgaacgaaT
GAGGCCGCCCTGGCGGGACGCCTCCCCTTTAGCattgtgttacacactga
tcgaatACACCCTTATAATGGTTTGCTTCACATACGACTCGAAcactttt
gagtgaaaaatcacttgtggttttttctCGCGCATGCATAATACAAGTTA
GGGAAATCAATTTTCCctaaactgaaaataaattccCCGAACTTAGGCTC
TAATTTGTGAcagtttaaatttttgaaataagttCTGATTTAATTAATTG
GTTAAAGGATACACTCAAAATAAAGCGTTCGGGAAATCGAATTTCCCATT
CTGGGAAATTTTATTTCCCTAATTCGATAAATCACATTTCCTGATCCAGA
GAAAGAATAGAATAAAGCAAGCAAGGTCACAATTCGTGATATTTCCTTTC
CCTAGCTTGTAGAAAGTGATCATTTTAAAAACTCGTGATCTCTCTTTTAC
CGACTCATCCATAATCAGTTTAGAAAAACTTGGAATTTTTGATTTCCGCA
TGCCATTCTGAATGGGCAACTAGAACgttaaaaatattagttttccACAT
GTGGAAATCCGTTTTCACTAACACATTGGTAATGCACTTCCAGCATTGGA
AAATAGGTTTCCCTAGTTTCCTTACTTTCACTAACTTAAAATTCTAGACT
AATGTGATCGAATAAAAAAACACATCTGAAAATGAACAACCCCTAGGCTA
AggaatcaataattttttcctgtgtattgTTTCAATTACTCGAATTGAAT
CTATGATAACAGTTGATAGCATGTCCCAACCAATCACGCACTGCATATGG
CAACCTAACCAATGTATTAATTGCCAGATCAAGTTATACCATGAATTTCT
TTAGCTACAATTAGCAGATTTGAAGTGAAACAAAAGAACATTTATCACCT
AAACGCTAAAGCAAGATTTGATTGATGATTCACCGTTCCAAGACGAGTAA
TTTTGTGTAACCATTGCGAGTATTGACTTAAAATTTCTTGAACAAACATA
CAACTTAGATTATTGTTTTCTTCCCCCAAATGTTATCTATTTCAAGGCAA
ataaattcccgtcaaatttaatttttcaagctcGCAGTCATATTAAAATT
GCCtccaaaattttttacttttgttaAGATTACTTCAACTGTATTATTAA
ATTTACTAataatttattgaaactttctagcaacaatttttaaatatttc
ctatctatctatataggaaatatttgttaaaacggtaatttttctccttc
tcctcCTTCTCCTTCcttcttcaagtctaacgccggttttggtcaatttc
gtgagtttgtaaatgagtctctttttagatcaagctccggcggtaaaaaa
agtaggatgttcttttttcgaggcggtaAATATCggtacggcgctctatt
ctccttgtcgatcgggcaacgtcggccgtttcagaagcgtattgtNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNaacaaaactctcaagataacaaaa
gacgacaaactgtcaatcaaagttctctatcattcaactctttttttggt
tagcagattttttgctaagttcggaatggttttgtgagcctgattcgcat
cccctatatcaaaacttatcagaggggatgtgtgcagcctacattgaata
tggatgtaaataatttgaaatcacctcacatgtacaattaaaatttttct
tgaacttggagatttgcttccccgcgtgcattttaaaacgtggaaaactt
tagttgtgaatcTAGAGATCTTTTGCAACATGTGTTTTAAACTAGGAAAA
TTTTatcatgaatttggagattttcttaccgtcaactgctccagcTTGGG
aatatctgacaaaacatgggacggcaatttggccaccatttcaccgaacc
tccaaagtcatttgatttgagttaatgaacggcgtattaaaaaataNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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ttattttaacatttgtaaaggaaatatttatccgcatctttgcggctctt
gtttatTATACAAACAAGAAACATGATATGATTAAGTGACCGTCTTCAAA
CTCGAACTTTATAAATTGAATGTGTCCTTAATAGTAGGggggaatttgta
aaatcgctcgatttttatattcaaggcacttgttatacatttttggaaag
ctaaggggtggGGGAATCAAAGTAACTTGgttgcaatttttttcggacac
cttggtgtgattttcggacaaatacgaagatctcaggcaaaaatcatagg
gtgaaaaattaatgaaaattttagcttgagaaaacggagacctgttgtat
atttttggaaagctctcaaaaaagtAAGACTGgtccgaaaaaaatttggc
aaccaagttattttgattcccctaccccttagctttccaaaaaattataa
taagtgctttgactaaaaaaatcgagcgacctcaaaaaaacgaacaaatt
cccCCCTACTATAGTAACTTGGAAGGTTTTTTTATTCCTTCAGAACAAAT
TTAAGCTATTTTCACCTATATCCTAATgttagtttaaaaaaattataact
ttCTGAAAACCTTTAAGATTTTAGGGATGACAAAAGAATATTATATTACA
TATTTGTTtctgaagaatatttttcaggCTGATTCCaatctcattttatc
ttttctaaTATTAACTTAAAATCCACTTCAGCCATTTTGACATTAATGCA
ACTCAAAAGCACATTGCTTTTTAACGATTTGGCACATTCGCAAATCACGT
GTTACACTGTTAAGCTTTTcgtgttttacttttttcaaacgtTTAAGCTC
TTCAAGCTATTCTATTCAggcgaccttccagcgcagctagTTCATTAAGN
TTTcatgttttacttttttcaaacttttaagctCTTCAAGCTATTCTATT
CAggcgaccttccagcgcagctggttcaTTAAAATTTAAACACGTTACTT
GAGGACGCCTTCAACGTGCAATATTGCAATTTATATTATATACTCCATAA
ATccaattaaaaaagatttttgtatgGAAAATGCGATAGTGTAACATGAT
ATTAATGTAATTGGTTCAAACCTCTGTAATTAATAAgaaatcaatttatt
ttcaaattttatgactttggTTGGCTGTTTATGAACAGAGTGTTGAACAA
GTGTTTTAGAAACATGCATTTGACATGGAAATTAAAGCGAAAGCTAACAG
TATCGATTGGTATAATATACCGATGTCTTTATTGCTTTGAGTACTCATCG
ACTGCAATTTCTGCTTTATATTactataaaaaatctttcaatgtCGAAAA
TCCTAAATTTTATTATGGATGCTCAATGGCAGCAATATTTCTCAGCGCTA
TTATTTCAAACTACATATGTGGACGAGCAATGGATAAGACAAGAGATTTA
AGGAAGATTGTATTGACTTTATCGTTATTTAACATTATTGGTAATCTAAC
ATATACACTGACTTGGTCGCCCTGGCTTCCTGTTTTGGGCCGCTTTGTGT
GTGGTATTGCAACTGGAATTGGTGCTGCAGTTACAGGTAAATAATTGATA
ACTTACAATCTGAGGAATATgctatctcaaaatcgtaaggaccgcgttcg
tctaaaaagACTGGGgacgacaacaaagttgcgtgattgtgtttacgaat
agggcgccgtatcagtttttaactttctggCGCACGaaaagattcttgtt
gtaaaattttccgcgggaggactattttcctcagctgtatgattttcaag
tgccttcagaggtttaccgtgcacgtaagaaaataatgaacagctgttat
caggttacacCGGGGTGGCTGtatgaaaaaactaaaatttcacTGGGTCC
GATTATGATTATGGTCCGAAAATTTCTATCATCGGGGTTAGGGTCAAAAT
ATGCCAGAAATTTTGCCGTCGAAAATAGTTTTAAGTGAATTTTTAACTTC
TTTCTGCACCAAAAAATAAACGACTTTATTTTTGATGGCTCCCTGAAAAA
TCAACGTCGGCTTGCACCGACTGGAAAAAATCTCGAATTGATGAGAAACA
TGTTTTAAAAGGTATCAAAAACCGAATTTATAAGGTTAAAACTATGCCTC
AGTTTTGGGCCGCTTTGTGTGCGGTATTGCAGCAggaatttgagcttcag
taatAGGTTAATTTtaatggaaaattttaaaaataaaattcgctTGGCAT
AATACCTTTAAGATGGTAGTTCAAACCTCCATATTTTCTTACCAAGTCTT
GCAGAGTTCTTATACCGGTTTATACAGTCCCCGAGCGAAACAGTCAAGCC
GGTTCGTGGATCCTTATAATCCCGGAGAACTAATGAGAGAatgaaaatca
tcctaaaataccAAGTAAATTATTGACTCCATCCATTTAGTTTTACGAAA
TACTTCAttcatgtttcatttttcttttcccaGGAGAGTTCAATCGCATT
TATAAGGAGAAGAAGGAGTTGGCACAAATGCTATCATTGAAAGCATTCAT
CTCGACGACGTGTATGGCACTCGCACCATGCACACCTTTGTTTTTCTATG
GCATTCATTTCCAAATCGGTTCGTGGAGAATCAGTCAAGATAATTTCATT
GGCATATTCCTTGCTTCCATTACATCATGCATGTGGATCTTCTCTTATTT
CGGGCTACACAATTTGACCAAAGATCCGGAAAGTCCTTTCTCTGATTTTA
ACAAGAATAATAGTAATGCAAGGATATCCAATGAGGACAAACTATGGACA
ACAAAGGAAATTGTAAAGGATAGATATCTAATGTTATTGTTGGTCGCTGA
AGGGTTTCTAGCTTTTCAATACTTTCAAATGGAGCTCGAAATCAATTTGA
TGGCAGTTGAATATTTCCATTGGCCAATGCTGCAACTTGGTTTAATCACA
AGTATTGCTATTATTGCATCTACTGGAACTTTGTATTTGACTCAGAAGAA
GCTCATGGGATCTGCTTTGAATATATTATTTCTCTATGTTGTTGGTTTGG
TAATTATTGGAGTTTTAGAATCCATTATTTTATTTGGTACTGTTACAAAG
TTCGATAAACCATTGCAGCATGTAGTTATCTTCACCACCTTATTCTTCAA
CATCGTTCAGGGTTTCGGATCGACAGTTTACTGTCAATGGTTGATGTTCT
CCATAACTCCTTCACATTCCTCGAGTATCATCGAATCCCATCGATATATC
ATCGCCAGAGCTTTGGCGTGTTTGGCTTTTTTTACTGCCAGTTatgttta
tgatattttgaagTATATAATTCCAGTCTATAGTTTAATtacttatattt
taattttgttattgttgtcaAATCGGTTTCACTAtgtggaaagaaaaatt
atcaagtGATAAAAAAC

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00004850	TCONS_00004850	Clytia hemisphaerica	transcript
TCONS_00004851	TCONS_00004851	Clytia hemisphaerica	transcript
TCONS_00004852	TCONS_00004852	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00004852-protein	TCONS_00004852-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000049	supercontig	sc0000049:203050..214916 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.57	5.73	1.49	0.87	0	0.04	0.04	0.28	0.23	0.05	0.13	0.08	1.51	1.69	1.48	1.26	0.49	1.05	1.78	0.88	0.74	0.57	10.28	7.92	0.99	1.02	5.63	5.04	3.43	5.34

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XLOC_002748 (gene) - C. hemisphaerica