XLOC_002680 (gene) - C. hemisphaerica

Overview
NameXLOC_002680
Unique NameXLOC_002680
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000048:51595..55582+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002680 ID=XLOC_002680|Name=XLOC_002680|organism=Clytia hemisphaerica|type=gene|length=3988bp|location=Sequence derived from alignment at sc0000048:51595..55582+ (Clytia hemisphaerica)
GAATATTTTAGTATCTCCCAGCAGATCCTGGCTATAATGCAAGCTTGTAC GTTGTAGAACACTAGAGTTACCACTTTGATAATTTTactatgttcttatt ttcaagataaaaacactcaatcaaataattaaaaaatctatACTTAGTTG ACAAACAAATAAAATCACGATGGCAGCAGGACCCTACAATTATTCTTACA TCTTCAAATACATCATTATTGGTAAAGTCTTTAGCTTtgaacttcatttt tgatgAAGAAAGTACCTTGTTACTTAGCTTTCtcaatttattttaaaaga agGCTGAATTATTCACGAAAATCTAGGAACAAATGCTGAACAATCACCAT TCTAAGATTCTAGAAACGGGCTAGAAAATACTGATTTCTTAAGCCCCTTT TTATCCAATAGTCGAATAATGTAAGCATATTAATAACATCCAACACCCCT AACTAGCCGAAATTCATTGGTACTTATATAAAAGTGTCAAATAATAATTC AGCGTTCACTTAACTCTTTACAGGTGATATGGGTGTAGGGAAATCCTGTC TTCTTCATCAGTTCACTGAAAAGAAATGTAAGTTAAACTTCACGAAGAAC ATATATCATAATGCAGCTAACATATCAAAGTGGTCCAACTATTATCTGGT TGAAGTgtatttataatcaaataacaCTGAATAACTTTGATTTATTTAGG CTTTTCGCCTTGTACTCTCTTCCTGACTCTCTTTCAATCTTATGTTCTCA TGTTCTTCCTGGTTCTGTACTTTAAATGAGTTTTATGGTTACAAAGTATT TTATATTCTGCTCATTATACAAACGTCTAGAAATCTAActactttttttg acattttcaacaGTCATGGCAGATTGTCCACATACCATTGGTGTAGAATT CGGGACACGTATCGTGGAAGTAGCTTCACataaaatcaaattacaaaTAT GGGATACTGCCGGACAAGAAAGGTAAAGATCTGCCTTACTGCGATATTCT AATCTCTTTCATTTTGGAGATCGCATCTTgttgaaaaaatcaataaaaat cgtAGCTCCTTTTTTCATAAAAGTAGATAATGCGAAATTTGATTTCATTA TACTGAAAACTTCGTGGTCATATCAAATTAATGTTGACATGTGTAATATT AAATCAACAATCAGCTATTCCTTCATCTGCTTCAactgtattcatgatat tcatgacgtaatgttttctacggaaagaccctggtttttgccagtagtgg cgaatttaaactagacaaaagttgtataaaatttgacactactggcaaaa accgagGTATTTCCATAAAAatcattacgtcatgaatatcatgtaTAACG GCATCATTTCATCTTTGTTGTCAGATTTCGAGCAGTGACTAGAAGTTATT ACAGAGGAGCCGCAGGAGCACTCATGGTTTATGATATCACAAGAAGAAGT ACATACAACCATCTAAGCAGTTGGCTAACTGATGCAAGAAACCTCACCAA CCCTAATACTGTATGATTATTTTTGGATTAGTTCCTTAATGCAAGGGGAA AGCTCTTCAGACAAAGCTAGTAAAATCTCGAGGTGCCTTGAGATTAAAAG TCGACAAAATTTATATGTGTACTGGGCGACCAACCCTGACTTCAAAAGCC TAACTTGAGCTGACTTGAGAACCGTTTTAAATTTTCCTTTACTGTTCAAa tggaaaaaatcattttttaaaaatatcattaGCCTTACAAATCCTTACAT TTTTTTGGGTCAGTCGGTATGCTTGCCAGGAGGAATCAGCTTTACTAGTA CTACAGCATGTCATGACGtgtaaatattttgtatttttaatgcTTTCAGG TCATCATAATGATTGGAAACAAATCAGATTTAGAAGCACAGGTTAGTCAT CggtttgttgttttgtttgctTCACTATTCGAATATCATCGGAATCTGTT GTTTCTTTTCTTGTTTTGCCTCACCGGCGTCGAATTTTAAAGAAGTAATT GTATGAATTTTCATTAGTCATgtcaatgtttttctttttcataaccAGTA AATAAAGGTgtgcttgaatttttttttaacagagAGATGTAACAtatgaa gaagctaaacaattCGCTGACGAAAacggtctacttttcctcgaagCTAG CGCTAAAACGTAAGTTGATAGTGCTTATACACTCCTGGTTGATAGacaga gtaggagttttacgccaGAATAGAAGCAAGATTTGACGTAGCCTTATAAG TTGACGGATGATTTTCGAAACAGTTTCATCTTCACAGACTTATTTTCCCT GgtcaatatatttatttttctaccTATAACATTTTAAGTAGCGTACCCAC GTAATAACGTACGCAATCTCAAACTGGTTACACTTAATGCCCCTCGTAAT CAATACTTGAGTTGACCTGGACGGATGTTTGTTTTTCATCAAGTGTAATT CTACAACTGAAAATCGAACCTCGTTTGACTCCACAATGTTAATAGACATT GATGGCCATCTTCACCTCGGCGCCACGACGTATCGTTATGTTTTCCCATC TTCTAAACTTCTCAAAATGTTATAGTACTGACCCATGATTCTTTTAAACT ACTAATGAATTGAATTATGAtcagaaaaatttgttttattttcattttag gggCGACAACGTAGAAGATGCTTTTTTAGAAACGGCCAAGAAAATTTTCC AGAGCATACAAGACGGAAGGTGAATAGAAATTGTTCTCTTTTATTTAGCT TGGTGTTTCTCCCAAAGCAATTTCGTTTAATGTCTACGATTCATCAAATC TTATGTCACATGTAAAATTTATATCCTTAAAATACCCCAAGTTTCTCAAC TACTGTGCAATAGCGCTGCTTGgtcttatgtttttattttgattgattgg ttacattttaatgtttttgttttgacagtttGGATTTGAACGCAGCAGAA TCAGGTGTACAACACAAACCGGCCAAGAAAGGTGGCCCCAGCCCCTTCCC ACAGGAGAACCCGCAAGGAAAAGACAGTTGTAACTGCTAGTCTACAATGT TTGGGAGGAGACTACATTGTCTTCTTCTTCAATAAAATTGTtgtttagta gttttgaaataatttctttgtatttttgtacCATACCGTTGGATATACTT TTTTTGGAACGAATGAATGactgaatgaatgaattttttgttatgAAATG GACGAAAAAGAACTTTCTGACACTGGTTAGAGTGAGCGAGACAAAAATGT GAAGACTTTGATGGCGGCTGGTAATCCATAAACAAAACATACGAATGAGG ACGATAAGAGTCATTGTTAGGTATATTATTTGAATTATCACTTCCATCGT TCAATACCAATCCCTTTGTAATCGACTAACAATTTATACGTCAGGGGAGT TTTTTTATTAATAAAAtgattattattatatttttttgttttggatttgt ttgattttgcaaaaaatgggTTCAGGTATCTTTTTAGTTTTgcctttttt tacttttatctaTTATTCCCAAATcaatttattaaaaatcatcaacacaa tggaacgaaaaaaattaatttattatttCTTGTAACTCTTTACGCTTTAT TTTTTTCGTTTGATCCGTTTCTGTTTCAAATTTTAACGTACTcttaattt ttatcaaaactgaAAACCCTGCGATCGGACTTAGTATTTGAAACTCTCTG TTTGGTCTAGGTGCCAATGGATTATAATGTCACATGAAAGAAACTTTAAT TCAATTCTAATGCTTTTTCTCAGACGCAATTCACATAATAagatattctc aaatttctagaGGTCTACTAAACTTATAGAATCTACTTATTTTAGTTCAG AAAAAAATGTAattgtatgtcaaatttaatTGTATATTGCCAAGGTTATT ATTACGTAATCACTTGCCGAGTAATTATAACTACCTTTCTATACATTTTA AAGATAAATTAAACTAATAACTTTGTCATGGTTTTATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004732TCONS_00004732Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004732-proteinTCONS_00004732-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000048supercontigsc0000048:51595..55582 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RAB14ras-related protein Rab-14 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
105.48 104.88 168.33 169.83 120.88 93.8 118.64 125.37 101.71 102.09 96.83 97.63 104.88 106.47 94.72 102.48 88.01 98.48 93.79 89.79 88.14 86.09 77.36 76.76 94.29 105.47 88.43 73.93 83.53 78.59