XLOC_002454 (gene) - C. hemisphaerica

Overview
NameXLOC_002454
Unique NameXLOC_002454
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000044:58470..67322-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002454 ID=XLOC_002454|Name=XLOC_002454|organism=Clytia hemisphaerica|type=gene|length=8853bp|location=Sequence derived from alignment at sc0000044:58470..67322- (Clytia hemisphaerica)
AACGACTACTACAGCTGCACCAACGACTACTACAGCTTCAACAACAACTA CTACAGCTGCTCCAACGACTACTACAGCTGCACCAACGACTACTACAGCT GCAATAACGACTACTACAGCTGCACCAACGACTACTACAGCTGCAATAAC GACTACTACAGCTGCACCAACGACTACTACAGCTGCAACATCAACTACTA CAGAATCTGCTCGTAGAAGACGTGATTTAGGGTCTGCAGGTATTTGATAT ATAATATAAGCTTAAATTCATGATACAATGTTTCTCAAACCTTTCGTTTA TCTTTTACAAAATCAGATTTAAGATTTATATAATACGTAACCCTTGGAGC ATCTTTGAAGGGGAGACAACGCTATCGAGACCGGCTAAATATTGCCATTT TTTGCATTTTCGAGGGATGTCTGATAAAATTGGTTGCATTTATATTAGCC CACTCTTCTAGAGCTTTAAATCTTTATCGTGGTTGGCCGCCAATGCGCCA TTGGAAAATCAGATAACAAGGAGCGCATAAGTACCGCACGAGATGAAAGT TCGATTGGTTCGATTGTGTTCACCGTCTTGTATTATATTTAGTTCCAAAA AATTCTTCATTTAAAATTCATATATATGTTCATTTTATGAAGGAAAATTA TTTTATTCAAGGTTGACAGCATATCAGCTTTGTCAGTATCGGTGATTAAA AGTGATAAGCTGGTGGATGAATCATGTAAATGAAACGTCGTTCGTTCACT TTTTATTTTGGATGTATTGTTGACCTTTTTTGATATTAAGACTGACGTTT AGTATTAAAAGTGAACATATTATCATCAAGAATTTATTTTACGAGACTTA CAATGAAAGTCATGATATTTGAGAAAAAAGGGAATTTCCCACGAAATCTT TAGGGTAGTGTTTTGGCATTAGACATAAAACTTAGCACCTTTAGAATCTT AAGATCCAAAAGTCTAAGAATGGTCCAATAGGGGTCAGAATATAGCCTGG AAATCTATAAATCCCTCCCAAATAATGTAATATTCAATTAGATTTAACAA ATAGCCGAAAAGCGACTTTTTCGTTCGAACTTTAAATTGCTAAAAACGAG AGATTAAGCAAAGTTCTCAATATATTTTGACCGAGATTGTAGAGAATCTT TAACTCTTTGAGCCTGCTTGGTTTTCAGATTTTTATTAATCCAACTTTTA TTTAAACAGGAGTTGGTAGTGTGACCACCACCCGTACTACCATCACCACA ACGCCCTTATACACCACAACATGTGTTTGTACCACGACCACTCCCGCCCC AACCACGACTACACCAGATGTGTTTGAAGAACGCAATATTGCAGAAGAAG GTAAGTTATTGATTTTTTTTTCATTGAAAGAATTTTTCATTCCTTCTCCA TTTGAGTTTAACTTTTATATGATGTTATTATCCATCAGCAAAACATTTTT GGTCGCATTATCATGGGTAGAATCTCTTCCCATAACCCTATGTTTCTTTC GCGAGAGATTAAAACACCTCTTTTTTTAAAGGTACAGCCATTTAAATTAT TCTTCATATGAAGTAATTTAATGAAGCTGCTTTAGCAAGCTACTCAAAGT TAGGCTTGGTTGGATCTTCTCACGGAATTCAAATAAAATATGGGCATTTT TAATGGTTTCTATCTTCAATTTCTATTTATAACAATCTTTTAGAGCAATG TATGTCCATATGTAACACCCAGCGTGCCACGTTTCAAGATACTAAAATGT TAGTTTTAAACGAAAGCCAAACAGCCGAGACAGAACTCAGATTGAACGCA CTTAAAGATAGTCCAAATTCAATGAAGTACAACGAATTATATTTCACAAC TACCAAGCCTAAAGATTCAAATGTGACTTGTGCACAAGCACTTGACGATT GGTAAGTTTTCATTCTTCTTTTTCCTACTCCTTGCGAAATAGGATTCCCT CCTTGTTTAAGTTGGAACGCTTACACCGCTGGTTCTGAACACGCAAAACA CAGATACTATGATGCATAGTAATGACACTCGAACCACGCGGTAGACCATA TAACTAGTCGCAGGCGCAGAACGGGAGTGATACCACACGTCACAATGTCT GGCATATCTCCCACACTCTTGTATAAGAGTAGTGGTACCCAGTTCCCCTC CCATGGTATTGGTTGACCTAAGCGAAGTGTGTTCACTTGCCTANGCCGAA AAGCGACTTTTTCGTTCAAACTTTAAATTGCTAAAAACGAGAGATTAAGC AAAGTTCTCAATATATTTTGACCGAGATTGTAGAGAATCTTTAACTCTTT GAGCCTGCTTGGTTTTCAGATTTTTATTAATCCAACTTTTATTTAAACAG GAGTTGGTAGTGTGACCACCACCCGTACTACCATCACCACAACGCCCTTA TACACCACAACATGTGTTTGTACCACGACCACTCCCGCCCCAACCACGAC TACACCAGATGTGTTTGAAGAACGCAATATTGCAGAAGAAGGTAAGTTAT TGATTTTTTTTTCATTGAAAGAATTTTTCATTCCTTCTCCATTTGAGTTT AACTTTTATATGATGTTATTATCCATCAGCAAAACATTTTTGGTCGCATT ATCATGGGTAGAATCTCTTCCCATAACCCTATGTTTCTTTCGCGAGAGAT TAAAACACCTCTTTTTTTAAAGGTACAGCCATTTAAATTATTCTTCATAT GAAGTAATTTAATGAAGCTGCTTTAGCAAGCTACTCAAAGTTAGGCTTGG TTGGATCTTCTCACGGAATTCAAATAAAATATGGGCATTTTTAATGGTTT CTATCTTCAATTTCTATTTATAACAATCTTTTAGAGCAATGTATGTCCTT ATGTAACACCCAGCGTGCCACGTTTCAAGATACTAAAATGTTAGTTTTAA ACGAAAGCCAAACAGCCGAGACAGAAATCAGATTGAACGCACTTAAAGAT AGTCCAAATTCAATGAAGTACAACGAATTATTTTTCACAACTACCAAGCC TAAAGATTCAAATGTGACTTGTGCACAAGCACTTGACGATTGGTAAGTTT TCATTCTTCTTTTTCCTACTCCTTGCGAAATAGGATTCCCTCCTTGTTTA AGTTGGAACGCTTACACCGCTGGTTCTGAACACGCAAAACACAGATACTA TGATGCATAGTGATGACACTCGAAGACCATATAACTAGTCGCAGGCGCAG AACGGGAGTGATACCACACATCACAATGTCTGGCATATCTCCCACACTCT TGTATAAGAGTAGTGGTACCCAGTTCCCCTCCCATGGTATTGGTTGACCT AAGCGAAGTGTGTTCACTTGCCTATAGTAGACCGTATTACTACAGTGGGA ATCAAACTCGGACCTCCCAGACGGGAGTCAAGAGCGATGACCACCACACC ACTACCTTTTCGAATATATAGAGAGTTCTGCATTATTGTTTGAACAATGG AAAATGGAAAAAAAGCTTCTTTTTACAAATTGTAACTTTTTTGGTTGGAA ATTTTTATTTCATTTAACTGCCGTATTTTTAGGAGGTTAAATGAATTAGA TTCGAGAGTGAATTGTCCTCGTTTCACCTCAATGTCGGTGGCCACCAGTG TAGTGCTAGATCCTTCAAATGCAGCCAATGAGATCACATCTATCCTCATT GTTTTCCATGGTGATTCCATCGTCGATGACAACTGTGAATCCAATCCAAT GATCGGTAGCAAAACTGAAGGTTGGTATTTTAGTTTTCGCCGACCAAAAC CGGCTTAATTTTTCTACCAATAACCGACACCAAGCCGTTCGTGCTCTACA TATATTTGTTGTTGGGCGGTCTTGCCCGTAGAGCAGAAAATTTTTCGTCT TGGCTAAAGCCGCTAATTTATGAGAAAAAAATCTGAGAACAAGATATATT ATTGTCTTTAGATGGAATTGCTTTATCGGATGAAACAGTGAATAAACCTA AACCTGACGTAACAAAGTCTGAATCAAATGGTCTGGTCTTCCAAGCATCT CAATACGTCTTAAATATCGTTTTCTTCCAAAACATCATTGTCAGGTTAGT TGCTGTTTAACACACAAAATATTATAGTAAGAATGGTAAGAAAGTCATAG AAACATCAATATAGAACATTAAACTACGCTCCTTAATAATATGGGTTGAA CCTCTTCCTAAAGTCATTCTAAAGGAAAATTTCGGAAAGAGAAAAGGGAG GCCTCGGGTTTCCCGAGGCTGTGGTCACAAACTTTACTTACTTAAGAATT AGGATGCTAGATTTCTACACCTCTGTGTCAGTCTAATAAGATTTCAGTGG CCACCCTTGCCATTGACATTTATAATATTTAGATGTTGATTGACGATTTT CCCAGCTAGTGCACAAGGTTGTTTCGACGTTCTTTTAACTTTATATGGAC GTTGTGAACATTAGATAAACGTCGAAAGAACTTTTTGTACCAGCTGGGTT TTAGCCCTTTCCTTCTACGGGGAAAATGTAGCTGATTTGGATTTGAGAAG AACAGACAATATGAAAACGAAAATCAATGAATTCTATTTCAGGTTTATTG ATTATTATTGCTACACATTACCAAGCCCCGGTGCAAGTCCACCAAGATCA TCAAATGGTTATTCCATAGCAGCTCTAAAAAATAATCCTGATGGTATTTG GCATTGCGCAAGGGTAATTATCAGCTACGAAGTCCAATTCGTCATCCCTG ACATTTATATCGGTGAACATCAACAACGACAACGACGGAGAAGAAGGGAT TTGTCCAGCCTTGCTGCCCAACTTGGAGGTGAGAATTATTTGGTTGTTTT TGGTCAAAGTTTCTTGGAAGAATGTTTTTTACTCTGGTCCGTGAAATACA TGGCTACCCCACAACCTAGCCCAATTGGCTACCCTGCTTTTTAGACCAAA TCGTATTGTTAATAAGTATCAAAACGAACATTTACATAAACACTTAAAAT AAAGGTTGTCTTTTTATAATTAAGTTGGAATTTTTAGGCTATTAAGATGC ATGAAAACACCTATTTAGGAGGTTTAAGGCTTAAAATTTTCTTTGTTATC CCTTTCCGAAGGCAAGAACCGCTGGGATGGAACATATTGAAACAAACCTC AGACCGTCATTTCTAAAACAAACATCTGCCTTAATGCTCGTTCCTATACT GCTCGGGAGAACAAGCCAATTTTGGGCGCCGTTCTCAAAAAATTTCTAAC GTTAGTGGAAAAGGTTAAAACAACTAAAATTTTCACAAACATTTTAACTG TAAAGTAGCGTAAACGTAAGTGCAGTAGACTTCCGGTTATTTGAAGCTCC AAGGGGGATAAGAATTTACTTCGAATAACCGGGAGTTCAAATAACTGAAA AATTCATTTTCCCGCCATATATTCAACTTAGCCTTAATGGGATGGATTTT TCTAAAGTAATTGAGGCATTGTAGTTCATTTGAGCGTAATAGACACAAAG AACTTTTACTTTTTGAAGAAAGAACTTACTTTTGAGAAGGGATTGAGGTT TCCCTCTCTGTTTTAATTTTCTGAACCGAAAGAGAATATTGAACTTTTGA AGAAATAGGTTGAAGATTGTAAATAGCCATGAATATTGAACTTTATTCTT GGAAGAAAAAGGGTTTTAATCGCAAAAAAATCAATGTTCTCATTTCGACG AACTCCCAATGGAAAAGATTCGAATAACTGAGGGTGATTTAGCCTATAAT TGGCCCCAAGGGGAATAGAAATCGCTTCGATAAATGAAAAAGCTCGAGTA ACCGAGAGTGTTTTTGCCTGTGTTGAGTAAGCAGATCCAAGGGGAAATCC AACTCACATCGAACAACCTAATTATTTGAATAAGTTGGAATAACCGGGGG ATCTACTGTAGTTTAATTTTCTATGTCCACAAACTGTTTTGTTTTGGCTT CTTTCAGACGTTGACGACAGGATGCTGGATGCGGATACGTCGTATATGAT CTTTGGAGTAGCAGTAACAGAGGCGGGTGAAGCCATTACTACGCCGTGGT CTGATGAAGCTGTTACACTACCCTCTGGTGTTGAGCCTGGTATGTTAATC TTAATTCAAACGTGTAGAAATAATTTTCCAACATTATATACGCCTTACGA CAAAAACGATAGTTACCTATGGTCCATTCGCTATATGCACTCATTTCTGA TAACATTATTAGACTTTGTCATCGTAACAAGACTAATTTTCTTTAGGGTG GTTTCTACATGAAAATTGAAGTCGAAGTCCTCGTTTTCAAACAGATTTCA TTGCTAATGAAATTGTACATTTAAACCAATTTAAATTCCCAAAAGACAAA CATTAGCTCTAAAACAAAAGTACTTGAAATTCAAAATGTCTCATGAGGTG TAAACAACACAATTATCATTGTGAATATGTAATTTAATAGCAATGAAATC TGTTTGAGAACGAGGACAACAATAAATTTATGCATCTCGAGAAGAGTGTA TTACCTGAGTACTGAAGGGAAACAAAAGTTTGTGTTGTTAGTTTTTTCTC GGAGGAAAGTGTTTGCATGCGTTTAGTTAACATTGTGTACCCCTTTTAAA ACTGTTCGAACTTCGAACTTTCGAACTTTTTTCGAACAATCTCCCATTTT TTGGTATTGCTATCCTCAAAAAGAATATCTGAATTTCTTTATTTGCAGGT GTGATGTGTCCCAGTGTGAAAAGTTGTTCATGTTCCAATTATACCGAAGT GAACAGCACTACTTTAAGTCAAGATATCGCTTATATTGGTGTCGATAAAA ATCAAGTCAATGAGACTCTCACTAACCTTGGCAAATGGGATGTGGAAGCT ATCAAACTCCTCTGTAAAGGTACAATTTTGAGTTTAGGAAAACGTTTTGA AGCAAAAAAATGAGGAAATACTATAGTTAGTACAGTAAAGTCTCCATAAC TCGAACGCGCTCGAGACGAGAAAACTTGTTCGAATTAAGGAGACGTTCGA GTTATAGAGGTTCAAGCTAAAGAAACTCTTCTGTAACCTTAAACAAAAGA TCTGACCCTGTCAGATACAGAATCTGATATTTCTTTCCAGAATCAACCCT GAAAGTGGTCAAAATGATCACTTAAAGTCAACCCTGGTAGATATTTCTTA AAATTTAGAATTATTTTACAATGAGCACCACACGGCCTCGTACTTCATTT GACATGCCAGGAAGACAAAAAATCTTCAGGAAATATTCAATGAATTTTTT AATTCCTTTTTTCTCACTGCTTTTAGATGCAAATTGTGACGCTACTGCAT TGCTTGCTGCCACAACCGACATTCAAACAGATATTGATTCCGTTCAAACT AACATCGATTTGAGTCAAACAGCTCGCCTCAATTTAAGAAAAACCATTGA TTGCGCCTTCAACAACGGTAAGTTGGTACTAGTATCTACGCGCCACCTTT TGTTAGATGATGGAAATGAAATTATGATTCTCTTTTACAGAACTGCGGCT GACCTTATTATTCTAAAATACTTATTCGGCCAAAACTTAGTCGGCCCTAA GTCACTAAATTTTGGCTTGGTGACTAAAATTAGGGCCGACTAATAATTAA GGCCGATTAAAATTAAGGCCGACTAAGTTTTGGCCGATAAGGTACAGTAA ACTTTCCCGGTGTTATTCTAATCACTAGTGAATCAAGTCTCCACATATCT ATCCGATGCCATACGGCTGTCAACGTCGTTTACTCCAAATTACCAAACAT TTGATAAAATCCTAGTTATGGTTAATAAAAGTGTCGTGTGTTTCACACAT TTCAATGTTTTAGTTATTTGAAGATAAAGATGATGTTTTTGTTTTTATTC AGGGACACGAGCAGAACTGTTTGAGAATTATGAGAATTTATGTGGACGGT TGATTTACATGAAACAATCTATCGAAGACTTAAAGATCAAAAAGCAAATC ATCAAAAGAGAAGAAGCAAGATGCTCAAACAGAAGTAAGTTCTAACATTT AATACAGTATTTTAATGCTTCCCAATTCGGCGAAGATGGTACTCAGGCGA ACATTCTTCAACCCTGCCAATAGTTTTTAGTGTCAACCAAAACATGAGAA AGTACTACTGTACTTGTTTTTATCCGCCTATGTTTCATACTTGATGTACT TGAAAGAACTCGAGTTGATTTCCGTAAATTTTGAACAAGTAAATTTATCA AACAAGTAATCGAACTGTTCGATTATTTTAGCCTCCCTTACAAACTATTC ATAAAATTTTTCAAAATATATTTCCCAATGTTTTTGTAGAAAATCTTATG TTTTTTTTTCTGTACTCAGGTTGGCTTCGATCAATTTTGGATAACATGTG GCATAAAGGGTAAAAATTAAGAAGAAACGAAATCCAATTCGTCAGACATG ATTTTTGGAAGGACGTTTGAGAGATTGAACCTTTACTATGTGTAGTCTAT CTAAGAAAAAGGCAATAACGTTTACCAAATAAAAAGCTGGTCACGGCCTT TTCTGAAGAAATTGGATTGCAATTGGATAACATTAAGAGCAATATAATGA ATGGCTGGACCATAGAATAATATTCATCTGTGTGCTTTGTTAATTATTGT CAACTTTATTGTTTTATGTCATTGATTTTGTACTGTATAAAATAACTAAT CGTATAATTTAATTAGGCATTGTATATTAATATGTACTCATCGCATACAA ACACACAAAAGAAGCAACAATTTCCGCGCAAACAAATTTGAAAAATTATT GATTGCTTCCGGCTTTTGTTGTGCATGTCCATAATGATAGTGGTTTTAAT GTTATAGGAATTCAAAGATTCATTCACCCTGCGTTTACGATTAGATAAAG GATTTTAGTTTTGCCTGTTATTCTTCAAACTTTCTTCTAGTTTTCTGAAC ACG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004388TCONS_00004388Clytia hemisphaericatranscript
TCONS_00004387TCONS_00004387Clytia hemisphaericatranscript
TCONS_00004386TCONS_00004386Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004387-proteinTCONS_00004387-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000044supercontigsc0000044:58470..67322 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.47 2.7 1.33 0.69 0.31 0.18 0.13 0.1 0.05 0.09 0.02 0.01 12.14 14.79 0.02 0.05 1.18 1.26 17.21 55.66 2.56 2.28 0.64 0.67 0.27 0.22 0.21 0.15 0.14 0.21