XLOC_002375 (gene) - C. hemisphaerica

Overview
NameXLOC_002375
Unique NameXLOC_002375
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000041:291047..296803-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002375 ID=XLOC_002375|Name=XLOC_002375|organism=Clytia hemisphaerica|type=gene|length=5757bp|location=Sequence derived from alignment at sc0000041:291047..296803- (Clytia hemisphaerica)
TTGAATTACATTCAAATAAGAAAAGTTTCAGTTAGCAAAAGTCCAAAGAT TTTTTAGATAAAGTATTGTCTGGTATAAATGTGATAACCTTACATTAATA ATTATTTTCATATTTACTTTAGATGGATAAATAAGTTTCAGTAAAGGAAA AATGAATAACAGAACTCAAGAGAAAACTCAACAGCATCTGATTACCAAAG AAAGTCTACGCACATCAATATCAACCAGAGCCAAAACACCTTGTTGTGGA TCCACTACCACCAAAGAAAATAATGATCAAATAGGTGACTCAACTTTCAG TCTTGTATTGATAACATGATAGATATTGTATAAACAAATAATTCACAATG CAGGATTTTGCATTGCAAAGCAACCAAGATTCTGGCCTTGGGGCTGGAGC TGCATAGCATTTTTGCTTAATTTCTAAAAACTTTCTATAAGCACCCCTAA TCATATCATACCATACCATTCAACTGCTACTGTTAAAGTTTTTCCTTTAC AAGATAATTAAAGAAATTAGCAACCTGGTTACTTACAAAGAAAAATGTAT ATATTTGAAATGTTAGAACAGAAAAACTTTTTAGCTGAAAAATATTTTTC CTTTAAAAATACAAGAATTTCTATAAAGTGTTATAGTAAGAGCTGGCAGG AGATATTGAGTTTTATCACGTGCATCATCATTCGTTACTATGCACACCCC TGGTTTTATTTTAAGAAAAATTAAAGGCACTGTAAAAAACAAATGATTGA CATTTATTTTTGACAATCTCTGCAATGTGTACTGATATTGTATAAGCAAT GCAAAATATTTCTTTTTTTCCATCAGAAATGTAGGCAATTCGTTTCTATT CTTATTCAATACTTTTTTATAGCAAATCGTTCTAAATTAATGGTCTGTAT TATAGAATTTAAGAGAGTTTGTTTTGATGCTTCTAAAACTGCAATTTTTA TTATATGCAAGCTCGGTACTTTTTCAAAGCGATTAAGACCTCACTATTAA TGACAATCTGGCTTTAAACTTATTTTTGTTCTCTTGCAGCTTCTTCCTCT ACAGCTGAAACAGAGCCAGCGACAGTTGTCAATTCAGCAACAAAACCAAG ATGTCGGAGACAGTGGGAACAGTGGAGTTGGGAAGAGAAAAAATGCTTTT ACGAGGGACTTGCAGAATATGGCAAAGATTACAGCAAAATCCAGTCTTTC ATGAATAAAAAACTGAAACTGAAGAATTATAGTGATGGCAAAACAAAAGA ACAGATCAGATTTTTTTACCATAGGACTTGGAGTAAAATTGCCAAGAAGT TGAACTTGCAGCCTGAGGAGGATAGTAAGAAAGCTTGTAGGAGAGAACTC CATTATTTGTTATGTCTTGGAGAACTTCGAAAGAAGCAATCTGCTGGCTT TGGTGCAAAAGTGATGAAACAATTGGATGAACTTGCCACAAAAGGAATTA CCTATGTCAGATTGAATGGTCGCAATTTACGGGTGAGACCACCCAATCGA TATTTGCGCAAAATTTACAAAGATATAAGTGATTCACCAGAAATACAGCT ACCTAAAACAGTAACGATAGAATTTCTACCAAACTCCAATATGGCTTTCA ATTTTGTACAGAAACATGCTTTCAACCCACGAATCAGGTTCACAGGTGTT AGTATTAATGCTAGATTTTCAGAAGTTTTCGAAATGCTTAACAAGAGGTT TATGGACGTATATACAAACACAAACTTGAACTTACAAATTTATCCAATGC AATCAGATACAGATTTTTCAAAACTACTTTCGAATGCTATTGAATTGTTA GCGACGTATGATAAAACACAAGTGACTGATATTGTTGTTGAAAAAGATAA ACCCAAGGATAATCTCCTTGTAGAGGACGTCACAATTGAAACCACGTGCA CCGATAAAGAGCACCATCAAATGGAATTAGAGCAAGTTTTACCGCAAATA TTTGCAAAACATGGAGAGAAAGAAACACCAGATGGTGGTTCATCTGAAAA AGGCACCACATTAAAGAAGAGTAATTCTTTCCCAGGGTATTGGACCTATA TTGATGCAAAGGAAATTTTCTTGAGGACGTTATTTGTTGTGTTTGAACAA AAACCAGTTTTTAAATTCAAGTATGAGTGGAAACAGTCTGTCGATGAAAG TGTTGACAATTGCACCTTTAATAAAATGGCTTTACAAAATTTAGCCAAAT TGTGTGATGTGAAAAAGGAAGAGGACAGTGTCCCTCAAACTGATTCAAGA ATGAGTGTGATTAGCCCGCTTCTGCAAAGCCCAAACTTTTTGTATGCTCG AAAACCAGGCGAGGGGGCAATTTCTACAACTCATCAGGATGGACATGGTT TAATGAATGGTACTTCTGGAAAATGGGTTTTGCCGAACAGACCACGCCCT GGAAGAATCAACAAATCACGACAACAACTTGGTAACAATATTGCCGGTGT AACTAGTCCTTTGTTAGCTCTCTCTAGTGGTAAGGCCCAATGTAAAACTG TGTTGAATAATGCTGTAGCAGTTAACTTAATCCCACAACATCAACAGAAT CTTCTACACATGGCACATTTGCAGCACAATTCCAACAAACTTGTCAACAA TAGCGCTTCAACTGTTGTTCATGGAGGTTTGTTTATTTTCTGTTTACTCC AAAACAATTTTGTAGCCCATTGCGTTTTTTTGTCTTTTAATATTAATAAT AAAGTGAGAATCCTATCCCAAAATTTTCTTGTAGATTTAAAAATTTCTGG TATGTATCAAAGAAAAACAGGTTACCTAGCTAAACATTTGCATTGTTTGA AATTGTTGTTTCAGTTCAAGATGAAGTAATTGCTGAGGGATTTCAAGAAC ATTATCAAGCACTGGCCAACATGATCAAATCTTCAGCTCTGGTCAAAGGA CAACGAAACAATGAGAACAATAACTTCCTCAAAACTCCTGTCAAAGTGAA TCCGATTCCATCTAACATACCCGCTTCTCCGAATCTGGAATGGCTTAATG AGGTTGGTTATTACTGGTTATTACCATATTTTAAAGTTATCAGGGTGTAA AAAAACTCGTCCAGTTTTCTTAATTTGGGGCCTGGAATTCCCGAGTTATT TTTCCTAGTTATTTTTTTCCGAGTTATTTTTCCGAGTTATTTTGCATGTG ACGTCATAATTACAGTTTTGTGCCGTCATTATGACGCCATAACAAAAATT ATAACTCAATTTTTTAGCTTTTTTTAACTTTTCAAGTTATTTGGTGTTTT TAAACTCGGTTTTATTTCGTTCCTTTAACTTTTCGAATTATTTGATAAAT TTTTAACTCGGTTTTTTATCGTGCCTTAAACTTTTCGAGTAATTTGATAA ATTTTAATTCTGGTTTTTTTTTCATGCCTCAAAGTTATCAAGTTATTTAT ATTATATTTTTATAGTAGATATTCGATTTATGGAAAATTCGACTTCTTTA TTGGGTTTGTTACCTGAAGGGCAGATTTTTATTGAATAAATCAAAAAATA ACCCGAGTTTAAAAATACCAAATAACTCGAAAAGTTAAAAGCTCAAAAAA ATTCGAGTTATCATTTTTGCAGTGACGTCACAAAAACTGAAATTATGACG TCACACACAAAATAACTNTAGCGCTTCAACTGTTGTTCATGGAGGTTTGT TTATTTTCTGTTTACTCCAAAAAGATTTTGTAGCCCATTGCGTTTTTTTG TCTTTTAATATTAATAATAAAGTGAGAATCCTATCCCAAAATTTTCTTGT AGATTTAAAAATTTCTGGTATGTATCAAAGAAAAACAGGTTACCTAGCTA AACATTTGCATTGTTTGAAATTGTTGTTTCAGTTCAAGATGAAGTAATTG CTGAGGGATTTCAAGAACATTATCAAGCACTGGCCAACATGATCAAATCT TCAGCTCTGGTCAAAGGACAACGAAACAATGAGAACAATAACTTCCTCAA AACTCCTGTCAAAGTGAATCCGATTCCATCTAACATACCCGCTTCTCCGA ATCTGGAATGGCTTAATGAGGTTGGTTATTACTGGTTATTACCATATTTT AAAGTTATCAGGGTGTAAAAAAACTCGTCCAGTTTTCTTAATTTGGGGCC TGGAATTCCCGAGTTATTTTTCCTAGTTATTTTTTTCCGAGTTATTTTTC CGAGTTATTTTGCATGTGACGTCATAATTACAGTTTTGTGCCGTCATTAT GACGCCATAACAAAAATTATAACTCAATTTTTTAGCTTTTTTTAACTTTT CAAGTTATTTGGTGTTTTTAAACTCGGTTTTATTTCGTTCCTTTAACTTT TCGAATTATTTGATAAATTTTTAACTCGGTTTTTTATCGTGCCTTAAACT TTTCGAGTAATTTGATAAATTTTAATTCTGGTTTTTTTTTCGTGCCTCAA AGTTATCAAGTTATTTATATTATATTTTTATAGTAGATATTCGATTTATG GAAAATTCGACTTCTTTATTGGGTTTGTTACCTGAAGGGCAGATTTTTAT TGAATAAATCAAAAAATAACCCGAGTTTAAAAATACCAAATAACTCGAAA AGTTAAAAGCTCAAAAAAATTCGAGTTATCATTTTTGCAGTGACGTCACA AAAACTGAAATTATGACGTCACACACAAAATAACTCGGGAATTCCAGGCC GCTCTGAATTTTACTGAGCGTCTGAATTATTAGTTTTTATTGAACAAATA TTCCTCTTACATGAAACATCTTCACTTGGAATGTATAGACCGTCACTTTA ACTGCTAAAACATCTCTGGTGAAAAATTTTACGCAAACAGGAGTATTTAA AAGGCCGCCCATGACAGATGACAGTACATACAAACATAAGATTATTTGAC AACTTTTATTTATTTTTCAGACTGTCGACATTTCGATGACCAGCTTTTTA AATGTTTGTAAGTTTCCTTTATTTCTTCTCTCATATTTTGGCTTTAATTT TTTTTTCTCGGAAGTCTAACAAATGTATTTGAGAATATTTTCAATTAATA ATATTCGTCATCTCAAAGAAGCTTGACATTTAAAGACACGTGTGCCCTTC TTGCCTCTAAGTGACAGTTGTTTCTCATCTTTGATAAACGATTTTTAACT TTTATCACTCCTTAATTTTCAGGTGACATGCAAGCCCTTCAAAATAAGGT ATGAAGTTTTTCTAATTTTATGTCTTTTCTCAACGAGCTAGAATTTAACA ATATCTGTCTTTCCGTCCGAAAACTTTGGGAAAGCCTGGAGACTTGAAAA TGGTCAGTTGGTTGAAATTTGGCAAATTTCTTCCTTGTGTTAATACTAAG AAGTGTTTTTTTTTTCATTTCTCAAATTTTTTTGTGTTTTGGGCCTTGGT AGGAGTTTTTTACAAAACTGAGGATAAAACTTTTTATTCGACTGGATTTC TAGAAGCCTCTGAAATGACTGTCTGAGGAACCTTTTTCTTTTTACAGAGA CAAGCAATGCAATCGAAAAATACGGCATCATCACTACACAATAATCTGAA ACCAAATGTCTCGCTTGATCCTGTCTTACCGAAGTTCGAATCCAGTGAAA TTTCTCAAGGACCTCTTTATGATTTGGCATTCGAATTGTCGAACCATGCT ACTAAATCAAAAGATCAATACACNCCTTTATGATTTGGCATTTGAATTGT CAAACCATGCTACTAAATCAAAAGATCAATACACTGTCACGTGACACATT GTCAGTTTGTTTTGGTTGTCATGGTAAGGACAAGGGATATTTAGCAGAAC AACCAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004276TCONS_00004276Clytia hemisphaericatranscript
TCONS_00004275TCONS_00004275Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004276-proteinTCONS_00004276-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000041supercontigsc0000041:291047..296803 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.37 8.91 3.05 1.8 12.24 9.4 6.96 8.46 4.21 5.22 5.62 4.29 3.41 3.59 3.3 5.02 6.03 4.81 1.77 1.9 4.47 3.53 13.55 12.32 6.57 6.78 2.57 2.07 9.22 10.09