XLOC_002294 (gene) - C. hemisphaerica

Overview
NameXLOC_002294
Unique NameXLOC_002294
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000039:389860..398234-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002294 ID=XLOC_002294|Name=XLOC_002294|organism=Clytia hemisphaerica|type=gene|length=8375bp|location=Sequence derived from alignment at sc0000039:389860..398234- (Clytia hemisphaerica)
ATCGATTGTGGTTTCAAAATTTCCCGGGGGATTTCCCTTTTTTCTCAAAT ATTACGACCATGATTGCAGATAAAATCCGTTCATGGGGGGTGGAGGATGA ATTGTCCAGGGGTATTGAAAAAATACCAAAAAATTGCAATGTCCAGANAC ATGAATTCCAAGCAGAAACCAGGCAACTTTTGGACATCGTTGCAAGATCC CTCTATTCTGAAAAAGAGGTTAGCTACGATATTAACTTTTATCAGATATT TATTAGTCGGCCTAAAGTTACGAAACAACAAGAAAAGCTATTTAAGGTTT TCCTTCAGACCGCAATTATTGCTCAAAACTTTAAAGTGTCATAAAAGCTT GTAGCTTTTGATTTAGAAGATGGCTTTGGTACCATTGGTAGGCTATTTTC ATACTCTGCGTCCCTCGTGGTCTAAGGGTTGAATTCTTTTGAAGGGAAAA AATTCACTTATGATAATTGTCATTTAGGTCTTCATTCGAGAGATTGTGTC GAATTCATCGGATGCTCTCGAGAAGCTGCGGCAAGTTCAAGTTACTGGTC AACAAATTTCTGATTCTGATTCTCCCCTTGAAATCCATCTGACCACTGAT GAAGAAAAGGGCCTGTTCATTATCCAAGATTTTGGTATCGGCATGAGCAA AGATGAGCTTATCAATAACCTTGGTACGATCGCTCGATCAGGCTCAAAAG CTTTTATTGAGAAAGCTAAGCACGAGAGCATTGACGCTCAAAACATCATT GGACAATTCGGTGTGGGATTTTATTCCACCTTTATGGTTGGTGATAAGAT TGATGTTTTTACCAAATCTTATGAGCCAAGTGCTTCTGGATATCATTGGT CATCCGATGGGTAAGTAGAAAAAAAAGGCTTCACAAAATAATAACCAAAT CTGTTATGTCGAATTCATTTTTTTTTCCTCGATTTAATCCTATTAATTTA GTTGTAAGGTTGCCAGTCACTTTTAACTTTGTGATTTTCTCAAGCTTGTA TCGGAGCAATAATCTCTTTCCCACCTTTGCGAGTTTGTCACGTATTTTGT AGTTTGAAAGATAAATGAAATGTTTCAAAAATTATATTATCATGTTTGTG TAATGCAATTGACGTAACATGTCTTAAAATACTATTCAATCGAAGTTTTT TTGTTTACCGTTGCATAACAGCCTGTTCAAACGTTCAGTGAAGGGGTCAG TCGTTCATATACTGAAACCGCTAAGGAAAAAAATTTACCTTAAGCGAGAA TTTTATCACATCAATATGTCGGACGGCTATTTCATTTTGAAAAATTTGAA GATTGGGTTCTCATAAAACTACTTTAAACTTTAAAGTGGCTCTTTAGGGT TAGACCATGTTCACACACGACGGTTCCGTTTCGCTCCGAAACGAAATGAA GCCATTCTATTGGTTAGAAGTGACGTAAAACTTGAATGGGATAATTGAAA CAAATCTGAGCGATCTCCATCCATTTACGAAAGCTTTCTCCTATTAACAG ATCTGGCTCATACGAGATCGCCGAAGCTGAAGGCGTAACACGTGGTACAA AAGTCATCATCCATTTGAAATCTGATGATCGAAGGTTCTCCCTCAAAACT ACTGTCGAAGGTGAGAATTTACAAAACTGTTCACTCATCATGGTGCTTGT TCTTCTCTAGATGAAGAATCTAAAATGGAAGGTGCTGTGAAAATACGATG CCATTACAAAAACAGTAATATCCTTTGTATATGTTCAATTTTATGGCTTT TTTTAAAACAAGTACCTGAAAGAATGGTCCAGGCAACTATCTGTTTTTGA ACGTTTTGAAGCTTGGAATAGACTTCGGAAATAACTTACCTGTATATTTT AGATATCATTCGGCGCTACAGTAACTTTGTCGGATTTCCCATTTACTTAA ATGGCTCAAGACTCAACAACATTGATGTAAGTGTATCTGAATGGGTTGGC AAACGATATCATCCACCAGGATGCATCCTCTCTTATTTTCCCCCTATTTT CTACTTTCCTATCTTCTATCCTGATTTTCTGACTTTCTCTAGTGTTTCTA ACTGTTTTCTAAGTATTTTTCTGAAATTTGACCGTACCGGTGTGGTCTCC GACCCCGGCTCGAACCACCAAATGCGAGTAACCTTGGTTTACAAACCCAA CGCTCAACCGCTTGAGCCAACGAGACACGGCAGAAAGTTGTCACTCACAA ATACTTATAGCGTGTAATTTACAGACCTTTATTAAGAAAGCTCCCAACCC TACCGGTGCCCCTACAAGGATCCCTACGGGATCCTAAGTTAGGTCACAGG GTACGGATGCCCCTAAGAAGGCCTTCGNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGCTCCA ACCCTAACCCTAACTGATAATAACCGAACCCCCGTCTAGGTCCGCAGATT GAAAAATTTCACTTGCATCCTGGTGGATGATATCGTCTGCCAACCATCTG AATGGGCGTGTATTCCTTAAATTTTCTAATAGTTTCAACGTTATTTGATG CCTTAGATACCTGTATCTAAAGGATTGTTTATAAAGAATTAAACGAGGTT GGCATGAATTACCCCCTTACTCCACACATGTTTAAATAAAGAACCTTTTG ATAAATGGCTCATAAGATTATGTACATCCCTCATCCCTTGACCCTGACCT TGGTAGATACTTCATACGGACACTCGTTCGTTTACGTTCTTGCAATATTT GCTGAAATGGTTTTGAGAACTTCACAGACAATTATCAATACGAATGTAAA AACTTGACTTGAATAATTATAGGCTTTATGGACGAGCTCAGAGAGGGATG TCAGCGAAACAGACCATTCCCAATTCTATCAGTTTATTTCCAATACGTCA GACGAACCTCGCTATTCGCTCATGTACAAAGCGGACGCCCCATTGAACAT TCGTAGTGTTTTATACGTACCTTCCAATATCCCAGAAATGTTCGGTTTCG GGCGTATGGAGCTCGGTGTTAGTTTGTATTCACGGAAGATTTTGATTCAA TCGAAAGCGCAAAAGATTTTACCGGAATGGTTACGTTTCATTCGTGGTGT TGTTGATAGTGAAGACATCCCATTGAACTTGAGTAGAGAACTCCTTCAAG ATAGTGCTTTGATTCAAAAACTGAGTGATGTTCTTGTTACTAAACTACTA AGGTACTTCTTAGAACAATCGCGAAAAGATGAAGAAAAATTCACGAAATT TATGAAAGAGTGTGGAAATTATTTCCGGGAGGGTGTGGTCACTGACCANN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NAAAGAACCTTCTGATAAATGGCTCATAAGATTATGTACATCCCTCATCC CTTGACCCTGACCTTGGTAGATACTTCATACGGACACTCGTTCGTTTACG TTCTTGCAATATTTGCTGAAATGGTTTTGAGAACTTCACAGACAATTATC AATACGAATGTAAAAACTTGACTTGAATAATTATAGGCTTTATGGACGAG CTCAGAGAGGGATGTCAGCGAAACAGACCATTCCCAATTCTATCAGTTTA TTTCCAATACGTCAGACGAACCTCGCTATTCGCTCATGTACAAAGCGGAC GCCCCATTGAACATTCGTAGTGTTTTATACGTACCTTCCAATATCCCAGA AATGTTCGGTTTCGGGCGTATGGAGCTCGGTGTTAGTTTGTATTCACGGA AGATTTTGATTCAATCGAAAGCGCAAAAGATTTTACCGGAATGGTTACGT TTCATTCGTGGTGTTGTTGATAGTGAAGACATCCCATTGAACTTGAGTAG AGAACTCCTTCAAGATAGTGCTTTGATTCAAAAACTGAGTGATGTTCTTG TTACTAAACTACTAAGGTACTTCTTAGAACAATCGCGAAAAGATGAAGAA AAATTCACGAAATTTATGAAAGAGTGTGGAAATTATTTCCGGGAGGGTGT GGTCACTGACCAGTCACCATCTCGACGTGAAGATATCGCCAAATTGCTGA GATTTGAAAGTTCGAAAGAAAGACCAGGACATTTGAAATCTTTGATGGAT TATATTTCTGGAATGAAAGAAGATCAAAAAGAAATTTTCTTCCTTTCTTC TCCAAGGTACGCTACTTTCTTCCCGTCATGCCTTTCTTCTAAGGAAGTTT CAAAACAAAACTTACGTGGTCTTTAAAAAAATGTTGATCTCGATTATGTT TTATGATTGTTCATTTCAATAAGAGGCCACTCACATATCGATTTTCCCAC GACTAACGTCAAAATGACACGAGACGATACTGGCTTTGTGTAAAAACCAT GAAAAATAGATGACCAAAACTATGCGTAGCGAGAGTAATTAACAAAATGA AAAAAAAATTTGATATTTGTTAGAAAAATTAGAATTAAATCAGTCCCGAA GATCGATGTTTTGATTAATTTTCTTAGCGTCAATGCCTCTGACCCCCACT CCCTCGCGTCATTTTGGCGTTAGTTTATTAGGAAATATCGATATGTGAGT GGCCACTAATCGATTCTATAAATGTATCACGCGCAGTTTCGAACGAGCCA ACCCGACAACAAAATTTTCACATAGTAGTCAACTAGTACCACTTATTTTC CAGCCGTGAGCTAGCAGAATCATCGCCATATTACGAAGCATTGAAAGTAA AAGATGTGGAAGTACTTTTCACGTACGAAGAAAATGATGAAGTCGTTTTT GCTGCTCTCAAAGAATTCCAAAAGAAAAATATAATTTCTGCGGAAAACTA TTTGATGAGTTCAGATCCTCTCACTGATGACGTCATCACCGATCAACCCG ACATTGGTAAGAGCACTCTTCGTTTTGTTTTGTACAAATATTGATCATCC CTGTACTAATAAAGCCTTCAAGCGTCTGCTTTAAGAACAACAACGACTTT GAAAACACAAACTTATAAGAATTTACAATATACCCAATATTCATTCATTT CAGACCACTCTAATTCTAGGAAATTTACAAGGTACCACTTTGGATTGATT TAGTTCCCTTCTTATCACTTTTCCTTTCTTTTATTGATTTCAGAAAAATT ATCGGAAACTGAGACAAACGAACTAATGGATTGGATTCAAAACACACTTG GAAAAACGAAATGTCAAAACATTAAAGAATCGAAACGCCTCGCATCACAC CCTGCAATGATCACAGTGCCCGATATGGGGGCAGCTAGACGATGGTTGAA ATTCGTCAAATCTGGCCCCAATACTGATCTTCTAAAGATGAAATTTGAAG TACTTCAACCAACTTTCGAGATCAATCCCAACCACGAGATCGTCCGCTCA CTGAACACACTAAAAGGAAGCAATCCCATGCTTGCTGAACTCTTGGTCAA CCAGGTAAAGAAACGAATTTTAAAAGTCTGTTCCAAAATTTTTGACATTC GGAAATACATACTCTCGGGTACCTAATAGCCGGGGGGATTGGAATAAGCG GGAGGGGGGTTGGAAAAAATCTCAAAACTTAATAAGCGGGGGGGGGTTGG AATAAAAATGTCCTGGGTGGAAAATGTTTGAAAATGAGACAAATACAGCT GAATTAGGACAAAAGAGGGAACTTTCAAAAACATTTTCCCAAAAAATAAT AAGCGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNTATCATCATATATTGTGAATTCAGATTTTTCATACCATTTTCAG ATCTGATCTGATTAACTGATTAAATATTTGAAATTTGAGATTTTGGTTGA AAAATCTTCAAGCAATCTATCAAGACTGTCATTTTTTCGGAGAAAAAACA CGATTTTAAATCTAGGACGTAATCTCTAACATATTCGTGAATAACTAGAA CGTAGAAGGATAAAAAACTATAAACACGCTCTTTTTATAAGAATACCTTA TCGGCCAAAACTTAGTCGGCCTTGATTTTAGCTAGTCGGCCCTGATTTTA ATCACCAAGCCAAAATTTAGTCACTTAGGGCCGACTAAGTTTTGGCCGAT AAGGTAGTGCCTATAAGAATATCAGGGGAGATTTTGTGAATTGACAAGAA TATAAGGGTGGGAAAACTCAAATGGAAGCATGATTTCTATCAGGAGATGA GTTGTTGTTTTTTATACGTAAAACGTAAATAAGAAATTTTGATATCGTCT TAGAAAATGAAAAATATTTTTTTATAAAAAATAAGAATAATGTAAAGAAA ATCTCATCCTCGGATTCGGAAAACTCCTAAGAATACTTCATCCTCAGCCA AAAAGAAACACTTTTCTTATAAAAAACCGTGCATCATTTCGATTTAATGG TACGACCTTTTGCGTAGGCTCACAAGCTGAACTTGTAATCACCATATTAA GTATAATTGAATGCAGGTTTTCATATCAAAAAAGGTGTGGTTTTAATTCA GAAAAAAGTTTTATGTCAACGGAAGGTACCTGCAGAAAGCAGTACGGGGT GTACGGCTGTTCAAGTTACCTTTCTTAGCCTTCTTGAGTCACTGCTTGGC AAGAGTTTCTTTTTGGAAATTACATATTTAGATGAGTTCAGGACGTTAAA TTTCTTACGGAAACACCCCGGTTTTTGCCAGTAGTGGCAAATTTAAAGTA AGGAAAAAATAATTGCTTCATTTTTTCATCTAGTTGCAAAACCCGGGAAT TTGCGTAGAAAGCGTTACATCAATCTAGTATCGCTTGCTTCACAAACTGC GACAAAAATCTTCAAAATAAAAAACTTGGACTGATTCTTTGCTTTGTGTT GCCATTATAATCAATTTTAACAATTTTAAACCACCTCTATTTTCTTTTAT CGTTTTAGCTTTTTGACAACGCACTTATTACTGCTGGTTTGTTGGACGAT CCTCGTGAAATGGTTGGCCGATTGAACACCCTTTTGTCTAAAGTGATGAC CAGATTGAATATCGAAGAACAGAAAAAAGATAAACAACAGACCATTATTA CTCCTTGAATATAGAAATATATTTTGCTGAAAACTGAACTCTTTGCGGTT TTTCTCATTTTTTTCAATCATTGCTTTGTTATTCAGAAATATAGTTCAAT AAAGGTATCGACAAATTATTTTAAGTTTTGATAATAATCTTTTATTTTTT CTTGATTCAAAATCATTATTAGGTTACAGGTTTGGTAGAGTCAACCTCTA AGTTGTGCACAGGCAGGACATTTGCAAAGACAGTCGAAGCTTTCAGCTCT GGCACTGAAAACCAATCTGTTCTTCTTATTTCTCTTCTGTACACATTTCA AACAGCATGAGAATCGATCAGAATTTCGTATTCTGAGTGGCAGTCGAGGT CCTGGACAGTTGGCAAATCGTCTGCAAACGAACATGGCTTTTCGCGGGAT ATGTTTCTATAAAAAAAAGGAAAAAGAAGTTAGAGTTTTATCGTCTGAGT ATGGAAGCACAGGGTTGTACCTCCTTGGAACCTTATTTTTGTTGAGGCAC TTTGAGACTCAAATTCTTCGCGTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004121TCONS_00004121Clytia hemisphaericatranscript
TCONS_00004120TCONS_00004120Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004120-proteinTCONS_00004120-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:389860..398234 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TRAP1heat shock protein 75 kDa, mitochondrial isoform 1 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
131.24 134.73 76.5 61.63 89.05 76.46 72.57 72.77 112.89 100.62 192.91 162.7 198.71 201.52 196.57 182.13 136.15 154.85 134.75 146.01 194.91 202.26 127.78 178.76 206.02 203.42 127.32 153.48 96.09 97.62