XLOC_002292 (gene) - C. hemisphaerica

Overview
NameXLOC_002292
Unique NameXLOC_002292
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000039:371769..375381-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002292 ID=XLOC_002292|Name=XLOC_002292|organism=Clytia hemisphaerica|type=gene|length=3613bp|location=Sequence derived from alignment at sc0000039:371769..375381- (Clytia hemisphaerica)
GGAAGGTTATAGACAATGGGTAAAGAAAATGTTATTGAAAAGAATTGTGA
ATCATCATATATTAGGTACCAGTACATCTTTTGCACCCACTTTTCAAATT
GAACAACATATGGTAACTATATAAGTTTTGATTTAAATTTAAAACGAATT
TATATTTGATCAATAAAATATATTCATCAAAATTCCCTCTAAAGATAAAA
AAACATGTCCATGTCCTGTCCATTCGTTATCTCGCCTTTTAAGATGTGGT
CTTCAGAAACACGTTTCACTTAATTTACTAAGAAGCTTAAAGGACTAATT
TGACATTGATTTTACTTGACATGAATTATATTTTATACTTATCTTGTAAG
TTATATTCTAAATTTCGTATGATATTTTACGAATTTACATGCATAACGTT
TATTAACATATGCAGGCTAGGTTTTTGGTACCCAAACAATGGCTCTATTG
TTTGAGAACAATAGAATGCTAATTATAATGTGAGCCTGATAGACACTTGG
TATGACACCTGGTATGACTACCTATGGTAGACACTTGCTTATAAAAATTT
TGACAATTTAACTCGTTAATTTGTATTATCATTTCAGCATTGCATCTCTG
GATCAGTGGAATCATTGCTGTAAGAATTTGAATATTTTTACTTTAATTTG
ATTTCACACATAATTTTTAACTTTCTGAAAATTTAAACTCGTAAGTTCTT
CTTTTTCAACTCGAAGCTGATGAAAAAAATCCTTGAAATTTTTTAAAGTT
TTACACATAAGCCCAATTTGAATTTGTGGGGCTATCTCATTGGACGAAAC
AAACTTTATTATTGAGAATTCGAGTGAAAGTCGGCATGTGTGTCAGTGTC
TTTTTTTTTGCTCGAATTAAATTTGTTTTTCTTATCAGGTCACTTGGAAC
GATTTTTTGAGAGAAAATAATGTCTATGTAGATTGGCAAAGAGACGTCAC
AAATCATCAAGGTTTGTTCTCCAAATTATCTTCATATACGATCTATCTCT
ATTATCGAGTCATGAGTATTTCCTTGTCTAAATTACGTGCTTTCTGTGAA
CGAGTCTACCTATTAATCATATGTTTTCGTAAGCCTAGCGTCACTCTAAT
TAGAGCTTGATTCTCAGAAACTGGCTCAAAGTTTTACTTTTTTAGCCCAC
TCGCTGTTTTTTTGTAATTTGCTTTTTGTGCAAACTTTTTCTAGAAGTAA
CGACGTCATCAACCCCCCATACTCTCTTTCCCTGCCTCTCTTCCTTGTGG
TTGTCGTTTGTACGTTCAACAGATCTTTCTAAAAATTGTTTTTGTTTCTC
CAAGGGAAGGGCAGGTGGTTGAGGAGCTAAAAGTGTGGTATGCAAAGAAC
TTGCAGAGGATTTAAGTTTCATTATAACCTTTCATCGTTTTTAATTAGCC
TTTAGAATGTTTGTGGGTTGTTTGAATCAAATTATGAAATATAAGCATTT
TTTTTGTTCATTTTAAAACATACCAGCATGTCATGGTCACTATAGATTAA
TTTGCAGTGTCATTGTATGCCAAAAGTTTAGCGATATAGTACACCCTCTG
GCCACTGCCGGCTATTTACACAGATATACCAATACACTTTTTGACTTTGA
TAGCTTGCCTAACCTTAACCAGCTTGATTTCAAACAAACGGGAAAAAAAG
TTTCCTTCTCTACTCAAATTTAAAGTAAACAGAGAAAAAACCTTGATTTC
TTCTAAAATTTCATCTACATGTTTCTAGTATAACTTTTAGGTGTCCTAAG
TTCTGTAGAATTTCCAAATTTTATTTTTCATATAATAAACCTCATAACCC
TCCAAAAGGGTTACTGTTCGTTTTCGTCTGGCCTCTTATAAGAACTTTAA
TATATTTCCTGTCTTTTTATATATAGAATCATTTCGATGTTATCCGTCCG
AATCTCTGGTTGAAATCAATAAAGAGAGAACTGATGTTCTTCCTAGCTAT
ATCAAGATGAAAACAGATTGCACATCCTGTTGCTTGAACTCCCTGTTTGA
ATGTGTAGCTCCAAGAAAAATCATGAAGATGAAGAAATTTAAACAGTTTT
CAACGAAACGTAAGTCTAAGAATTACTTTGTATATTAACTTTCAAAGGAT
AGTTAATGCTCTTTCCTAGAAAAACCTGACACGCCTTCTGTTGAAGTTAC
CTCTTAAATCATAATCCGATAGATTTTAAATCCCAGGATTTTAAACATTT
ACTTTGCAATTCCTTGATCTCGTTAAAACCACTTGACAATTTACAGTGAC
ACCCTGTAATCGTACTTCGGGCCCTGCTAAAAAAATTATGTAAGGTTTTT
AATCTAATGGACGAGAAGGTTTTTAATATTGACTGTCTTTGATATCAATC
ACATCAATAATATCAATTTCAAGGACGTGTCCCTATCGAACTAATCTTGA
TCATTTTAAGTACTAATAAAAGGATTTCCTACTGGTAGAACACTGCTTAC
CAAAAAACAATTTCCGCCCCTAACACCCTCTAATAATTACAGCCCAAAAC
ATTCTTTAGATTTTGGAAAGTGCTTTAATGCTTCCAAAATCTTTCCTGGA
TCCACGATCTACAAAATTATTTATTCTTTCGGAAATTGACACCCCTTTGC
TATTAGGATTATTTGTCACTAAAAGAAATAAACAAAGATTCGTCAAAATT
TGTATAGAAGGCCCTCGTTATTAATCCGCATTTACGTGATCGGAAAACAA
ACCACGTGCAGGTTTAAACGGGTCTGCAAAATTTGTACAAGGTGCTACCT
ATTAGTCATTGCCTCATGTTTTGACTCTTGTCGATAATGTCACAAATATG
ATTTGTTGAAGCGTCGAAAAGATAATTTCAAGCAAGATGTTGATACTTAA
TACATATCATAGTCCGATTAAATTTAATATTCTTTTCGTTAAAATATTTG
ACACAACTAAATGTCATCCAAATTTCAAACTTAGTTGCTGATTTTGTTTC
GGTGTGTCACCCAATATTTATTAATTAAACCCTACAGTTATCTCTTAGCC
AAACTTTTGAATAGAAATTCCGCACATAATAATTTTAGTACATGTCCCGG
GTTTAGGTAGTTTCAGTGAGACGAGGGTGACTAGATGAAGGGCTAGCAAT
TAAGTAATTTATTAAATTTATACTTGGTAGCACTTGTACTTTTACTGAAA
ACTCGAAAAAGCCAAAGTCAATCTAAATCCTACCAAAATTTTAGCCCTTC
TTATATATCACATGGTTATGCTCTTTTTTTGTGAGTCAGAGGGTTTGACG
TGGTATCAAAATTACTAATTTTTCCTTTTATTCTATTTTCAGACGTGTAT
TTGGGCGAAAGTCAGCATGCAGTATTTGAAGTGGATAAATGTATATGTAG
ATGTCGGATAACAACAAATGATTGCCCTCCAGGGACGCGCTTTGAAAAAG
AGAGCTGCGCATGTATCGATCCCGTCAAATTTCCAACAGGCTTTGAATGC
TGACGAAGAAGAGAATGGGGACGACAATTTTTTCATAGATAAGGAAACTC
GTTACCATTATTTTTAGAAAGGACATTAAACCTTATTACAATTATTCTTA
ATGGTAGTTAATTAATTGTTTTAATATTATTATTTAAAGGATGTATCTAT
ATATTGATGTAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004117TCONS_00004117Clytia hemisphaericatranscript
TCONS_00004116TCONS_00004116Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004117-proteinTCONS_00004117-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:371769..375381 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.15	5.38	3.02	2.82	1.34	1.38	21.38	18.73	2.76	5.97	4.56	1.22	4.22	3.67	9.12	5.77	1.66	2.94	6.81	9.93	1.56	1.4	3.38	3.39	2.21	3.8	3.94	4.29	1.61	1.29