XLOC_002100 (gene) - C. hemisphaerica

Overview
NameXLOC_002100
Unique NameXLOC_002100
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000031:831513..837605+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002100 ID=XLOC_002100|Name=XLOC_002100|organism=Clytia hemisphaerica|type=gene|length=6093bp|location=Sequence derived from alignment at sc0000031:831513..837605+ (Clytia hemisphaerica)
tacAGAGCCATTTCAAGTGTTCCGTATCGAGCATACAGCAGAAAAGAAAT GTTGGTGGTATGATAACTCAACAACAGGCGACATCAAACTCTCATACAAA TGTGACCAGCAATTCTACCTTAATGAGCGATAGTAAGATTTAACAAATTT CTTAACATAACTctcacccctgtatcacagaaaTTATGTTGAATTGGGCC Atcccattaaatttccatacaggggagtggacgaaccttttgaagtcaaa aaatattttcttgggAATGTGTTGatacaaaaaaatggaaaaatttgcaa aaaagccCTTgggaaaattcttttcataccttaaagtgagggtgaacaaa ctaaaatcagtcttttagcCTAACTAAGCTATCAtttacccctggaaatt ttgaaataattgttTACCTCCTAGAAACACATAAAAAACACTCTTCTAGA CCCCCTGGAATTTTTTCTCAGATTACCCTCTCTGAAAATCtttgtccacc ccctgtatggatattgAATGGATGGCCTATTcttgtttccattttgaaaa tcaattgATACTTGTATTTTAAATGttcataaaaaattacaaactcTAGA AGGTAACCCAATAACAgctggtcataattttcttacgggcacggtaaacc tctgaaggcccttgaaaattaaccatctgatGAAAATAGTCCTCCTGCGG AAAATTCTATAACaaaaatcttgttgtgcgccggaaaatcaaaaactaaa ttttcctgatacacaataataataaacacaatCACGTAACTTTATTGTCA TTTCCAGACCTTTTAAACCAGCGCGGaccttacgattttgagatagcata ttcgtcagatcatgaaggtaataaagatatagatggagagaaaacgtctc ggtaatgacctaaaggATCgctgaaatcttttataaatctattcaaagcg gcttttctttgatgtaccatcattggaagcaaaaaacatcaatttataac tttataagaacagaaagagactgTTTGGGTGATTTTGAAACacttaattt tgccgaaaatccttgttaaaatgcgattcgaaatagtttcaactgatgta agaataaaagagtatattaatttcataaggacacatttttgggctggcat tttgttaacattgagagTTACATCACAtcatcattgaaagtttcttatct taaaatcttcacgtctaagtgggcagcggttttcatactctgacaaaatg atcgatacaaggctcctaatcgtaacacgtaattcttttttaaatctatc gatggctttatgggcagcttcccctagaagtttggagtattgtgaagttt ttttcaatttttcatgacaagactatgtaatgtcttttcattcatcttaa atattcccacgagtatacccaaaattaatcatcttattcccaaagcaacc aaacagctgtttgcttccgatgataaatcagaatagaacaaaaggcattg actctccatctatctttattacctccatggtcagattgttatgttttcac acatccctttagagcttcagcgtggtgggcagaaaacattcacaatctga tctcaggttatttGAAGGTAGCTCGTTAAAGTCGTAAAAAACTTCTTTCA TTTGATGTTTTTCATTACAAACCCACTTGGCaaacaacgttatttcaacg ttcatctaacgttatatggacgttatgaacattagataaacgttgaaaca acgttgtttgccaGCTGGGAAGAGTTATGGTGAACTGAACACTACCTGTT CTCAAAATATTGTCCACTTTTTCAGCAAACTTTTCAGTTTTCCCAATCAC CAAAGTTATGATGTCAATATTGCCAGCCAAAAGATTGTTCCAATGAGTCA ATACGAGCATCACACTTTTATGTATTTGATACGTGGCTCCTGGAGAATGG TTTCTAACAATAACCAAAACTATTTCTTGGAAAATACCGATGGCTCACTT AGAATCACAGGCAATATCAACTACGCAAACAATGTCATTCGTGTTTTACC AGGTATCCTTTTATACCTTATGGCAGTAATAATCTCAATTTTACAGCTAA TTTCACTGTGCGCCAAGGTTTGAAATCTACCAAACCCAGCCTCACTTTCA TTTCGAATTTCCCGTGTTTATGTATTGCGCAATCTATATCGGAAAAAATA AGGTGCTAATTACTCTGTCTGCTTTTCTTTGTGTATGAAGGAAGCACCCA ACGAACAGTACCCCTGTCATACCATTAAGTAGACTAGCACGTGCCAATTA TTGGTCCCATATTCCGATGGCGAAATGGCGGCCGCCCCTGCTTAAATAGT AAATTTTCAACTTGTTGTtagaaatatttgatttttaatttgaatatcTC TATTATTGaagatgttatcgtccgtttcaGTGATAGCAAAGGTTGCGGTA TACAATATCTCTACAGAATAAATCGGTGGTAGAGTTTTGAAGAAACGACC GTCAAACTCTAATgtctgtaaactcttttcggcaaaaaacccATTTGcta attttcttcggctttagGCTTATTTATTAGATAATGATTTGtcttttgta taagattcccatatCCACACTAACATACATaattttccggaatctttccg TTATTTTTCCTGGGATAACCAGCATGAGATTTGAAAGGGTTTGAttctaa aggtacggaaaatcttgaGTTTAGTCACGGaactgcctaactttccgaaa gttatttttcaactacccaaAGTTCTGGTCTTTTTTtgctagaaaagtgg caaaggaatcttattgcgggaatgggaatcttatacaaaacgacggtgTA GCACAGTctactctataattcgaacaagcTAGATTCCCCGCTCAACTTCG AACTATCGAAAGTCGATGTCTTTATTCATTAGGTATGGAAGACTTTGAAG AGAACCGAAGAAAAGGTTTATTGAAGATACAGAGCAATTTATTTACAGAA GAATTGTTTATTCTCTGTTCGGACAATGTCCGAAATCTTTACAAGTAAgc tcaacttttttttgatttcttcccAGGGGTGCACTAAGTAATTAaataag tctgcgaccgcagtcggaggcgacccgaagactcctctttcgatagctat ctacccgaggATATGGGAGGCCGCtcaacttacccttgatccttttctTA ATTGCTGAACATCAAGTTGCGAGGCATCAAATATCGTCTTTCATAAAGTA CAGAGTCTTTAGTATGACTCATCTGAGAATTGAACCTACGATCTTAAACA CTGtagccgaatgctctaccactgcactacgatCAGACTAAGTGTTACTG TTGTCCAGTCCTTAGATTAGGCAACAGTAAGGGAGTCAAGTGGTTGGGTT TTCATACGCGTGTATTCTGTGAATAACGGCTATAAAGCAAATATAGAACA CAAGTTTAAACAAACTATATACAAAGGTCTAGGTTAAAGTACAAGAAAGT CGAGAAAAAGATATacttactaaagtctgtccagatataattggcagtgg aaacaagaatgcctgtaacttttgatagtcaaatataattatggaaattt tttttgcttgttttagaaaatcaaaagcgctatatttgaatgtatttttg gttgaaaaactcgcgatttttagcggtttaatttgcgattgtaaaaattg agctttttttctacttatgctataacgttcatttttacaccagtggtagt tcaaccttaggttaagaagtttgttaaatttcaaggcaaacagaaaagtc cttcggaagatatgggaccaaaaataccccttggtagcacttttctgtga aatatcaaatctccaacttattactaaaaacgggggttctgttatctttt ttgaatagtgcaattaaaagttggaaaatgttaagtgttggtgcattggt attattggtatcattgaaataacaaggaaatacatatcaaattatcatta cgaccaccttcgtataaataaaactttgttaactcagagattccgggcgt tactttcaaccagtcactgctcttaccaGTTTAATAGTTTCACTTAATGG tatagggcgcaaataaggacaaaaatactaggggcgccaatttcatagtt tgcaccaccaagaaaattaagccaggccgctactgatgggtaaaagaaaa gttttcaatttttttttcttttaccgtTTTTCTTCAGGCCAATCACCACC AGTTGTTTCTATTCCTTTGATTTCACTCAATCATGGAAAGGTAAGATACT CGacactgtaagttggtctaacgTCGACATTCCTCTTCTAATACCGACAC CCTTTTAAATTaaaagagggatgtcgacattagatcaACTTACGGTACAC CGTTTTCAACAGAACCTGTCTCAATACAATGTTCATCTGCGATTAAGAAA TAAGAATATACTGACGGTAAAAAACCATAATAAATCTatttgaaaatcaa gaaatttcataCCAATGATTGTTCAATTCGTCAAGATTTCTAGCCCTTAT CTTTCCCAACAcctacaaattttttttcagcatTGGACAGTCAAATCACA GGTGTTCTTTTTTACGACAAAGATACCGATTATATTTACGGGAGATGTCA TCGAggaaatgttttctttaaaaaggaTCTTCGCTCTCTATCAACACCTC ATAAGGAATTCATAGCACAGTCAGAATTTATCACAGCAAAGCAACTACCa aatattgaaaagatgaaaagaTTCAACTTCCAGGAATTCCCAACCATTGA TAACTTTGAATGTAAGTGTCCTTAAAGGCTTACCATTTGAATACAAAGAA ACTGctaaattcaatccgtcgtAAAAAATAACGGCGTGtatttaaggctt cactttttcttgcctgggaaaagTTAAAGGTTCGCTTTTATTTAGTCTTC TTCGGgcttttatttcattggaaaaaaCGCGCACTTTTAGTCTATTTCAA AGGATTGGTGTATCTGTTACATGGTATTTGTTTTCCGTTATCATTCAATA GGGAATTCAAGAACTCGCTATTATCTTTGTAAAAGTTCTACCTGTATTTT AATTTGCAAGAGATTGCTTAACCATAAGACGATTATTGCTTGGACGGAGA AAAAATTATGTACTAAAAACACGAATGCTATTAAATAGATAAGAAGACAA GAACCTGAAAAGCACGTTCTTAAAAATTTCATATTCATTTACTTATAAGA CTTGATATCTCTAGAACTATAAAACcttcttaaatttttaagcaTAGAGA GCTGAGTAGCTATGCTTTTAGCTATATTAGAAATTAAAGTTTTAACTTCG TcacttttttcatcgaattACTTTTACTTTTTAGTATACTTTATTGCGGA ACACACTGTACCGGATGATTTCAACCCTGTTTGATTTCAATTCTCTTCTC TAcctcttcatcttcattttccttttcacagtttcGAACAACGTCGTCAA TAACACGGCCAGCCTTTTTGCTTTCCTATGGAAATGAAACAGAAGAAGAT TTCCAGAATGTGAAAAAACGTTGTCTAGCAAAGCAAGAGGAGGGACATGT ACTCGGGCTACCATTGGTCAATGGCGAATGAAGATGTCCAGTCTGTTTGA TacgaagttgaatttttttatgtACCCAGCAtacaatctcgtacccagaa ccccttgcaccactttttgattttaatggaCGTAACACAATCGTGAGCGT TATTAGAATCATAGAAAAAGTTTTCTAAGGGACTAGGTTCGAGCTCGGCC ATCTTCTTCATGGTAGATGTCAAACTCAGTGTCGGATATTAAGTGGGTTC GCATTGAAATTGGAAAGATTGCATAAAGGAAGACGAGATAAGACGAGATG CTCTCCAGTTCAACTTATCAAAGAACAAGAaaacaagataggatagattt tggtAAAATCAGAAAAGCAGGACCGGCGAAAACGGGGAGACTGGGGATAA TTCAGCCTCCCAACTTTTGAGCAAATTAAGCCTTTTTTAGTCCAGGGAAA GTGTGCTAAAAATGAATACAATTGTGCATTTTTGACTAGAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003766TCONS_00003766Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003766-proteinTCONS_00003766-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:831513..837605 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15 0.09 0.28 0.08 0.33 0.42 0.16 0.33 0.46 0.8 0.78 1.04 0.18 0.04 0.22 0.15 0.9 1.23 0.05 0.47 2.6 2.6 1.48 2.97 4.01 6.47 0.42 0.13 0.03 0.21