XLOC_002083 (gene) - C. hemisphaerica

Overview
NameXLOC_002083
Unique NameXLOC_002083
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000031:224429..230168+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002083 ID=XLOC_002083|Name=XLOC_002083|organism=Clytia hemisphaerica|type=gene|length=5740bp|location=Sequence derived from alignment at sc0000031:224429..230168+ (Clytia hemisphaerica)
ATTTACTTTCGGCTTTACTTAAGTTTTAGTTGTAAACAGAATGGTTGGTT TGAAGAGAGTTTGTTTAGGGTTGAATATCACAACTTGAATGAACTTTGAG AAATGAAGAACGCTGAGAGCTCTTTGATTATACACGAAGATGAAGGTACG TTCTaaattttgaatgattttatAACCATAATTTTACCACCTTTATCATT GATATTATACTAGTTGTTTGACATTTGAAGCTGAAAAGCCTGTGATGTTT TCCCGGAGGTAAAAGTGCTAGAAATTGGTAGATTCTCAAGAAGAGATACA CCCCTATTCCTATATGTTATCAAAATATTAATTGCTCTGTATGACaaaaa ctgatattttcagatatgtCATTTAAAAAGTTAAACTCTTTTCTTGTTGC AGACACTATCAGTTATCATTTTGTTATCGATCCTCGGAATTAAACAATGT TCATCGATCAAAAAAGAGTTGTTGGATAAGATTGTTGACGATGTTACCGA CAAAATACTCAGGTTAAACAAGTCTATTATTGGTTAAAAATGACGGTTGC CAAAAATTTGAGTCAATAgaaagaccttttcataaattacgtcatgagta actcttacctcgttttcaaaatattgctatggtaattgattcccagagga gttcaTGATAAGTGTACTTTACTTGTGAAAGTATAAGGCTTAAGAAACAA GGCAGTTGTTGCACTCAAAATATAATTAATGAAGGGGCCTATTGCAATGT CTTGCGATATTACACCGTAGACCCAGTAGCTGATTCGTTGTAAAGGTTGT AaaatcaatacgtcacttgcgaCCAATCAGTTAGAGAATACCATGAATTT CATATCAACTGATTTTCTCTCTTTATCAATCAGTGATTTGGAAGAATTTA ATGGTCTAGACATcgataatgatgaaaatgaagaagatgaagatgatgac gtcatgatgGAAGTTGAgaatgatgaaaatgaagatctaACTCccaaaag taatacttctttcGATTTGTTGATACCCGGAGCACAAAATTTACGCTTAA ACAGTCCTTAAAAAAAGGGAACCGATTCTATACAAAACTTACATTTTTTT CAGACTAACAGCTTTAATccagattttttaacctttttatggggTGGAAC ACGaaacttttatttttgcttGGGTTTCCTTAGGTAATGAAATTACCAAG TCGACATTAAAAATTACAGCTTTTTCTAAATAGGTTCTTGTAAATATTTG AATTGACATAGTACGCATGCACTGTCTTCTGCTTTGGAAATCGGTTTAGG AAGACCAGGTGATAAACCACAAACATCAAAAAGTTTacagtctggatatc caggttCTATCCAGGCTCAATGTTAATTGTGGCGCATCGAGCTTAGCATT AGGTAAAATTAGAGAATATTAGGAGAAAATCAGAATAAGTGTATGAGAGT AATATATCATGTTTCACTATTTTAGGGAGAAAAGCGGACCCATGGTTGAG AGTGCCACCGATTAGAATTAGAATTCCAGTTAATCATCCTCGACCTCATA ATTGTCAAATCCATCGTGATCGTAAGTGATATTCTTTTTCCACGTCTCTG ATTTCTAAACCTTAGAAGGATCTTAAACCAGCAAGGTGATTCAAGCAAAT CTGTTTCTAATCACATTAATTAAGTTCAAACACATTCAATAAACTTTACT GTATAAATATTTCTGGCAAAATGTATGTATTAAAGGCTTGGTGACATCTG Cgctggtgcaatgcaacatgttccatcccaccaacacaagaaaaaaagtg cgtgtgtcatggtttctttttttgttacatgagacaaaaagtgagggaaa tacccaaaagacacgctgattttgtcccagggacaaaagagagatttaat ttttattggtagaaagaaaaatgggatgGAGacaaagcgtttcaggttgg taggatggagcatgttgcatagcaccaacgcgaaaaaaacttttcgtgTC CTTAAGCCTTAAGAAAGGGTGATTAGAAAGACTTTTAAGTCCAGACTAAA TACAGCGCGGTTTTGCAGTCGGATGAAAAATACACTAGGAGTTGATAATA TAAAATATTAAGACTTCAGACTTCAAAAGTGACTCACAGAGTGACTCACA AAACCGCTATCTATTTCAAATTCTGTCAAAAGATGCAACCtattttgtct ccgctgcaaattaaAATGAGACAGTCTTTATGATTCGCTAACTGAATGAG CCAGTTCGAGAGATTAGAATAAAAGTTGGCGCTTCTTTTACTCCAATGAG TTATGCCCCATATGCTGTTATAAAAAtaaccttttttaaatttagaatGT GGAAGATTCAAGAACGGCTGTGGACCACAGTTCTACACAAAATATCTTGG TGGAAAAAATTTCTTGCCCCATGAGAGTACTTTCACTCAAGCATGTAACA AACATGACTCGTGTTTTGATTGCGTAAGTATGAGCTCGGACCCAGCCTCT TACAGTAGTTCGCTACTTTTTGATTCTTTAACAATCTCGAAGGATTTTAC CAGCGTCCATCAGTGAAATAAGCTTCAAGAGGCTCTGGGTACGAATTCGG GTGACCAATCATCGAGTTGAAGCCACGAGGGAGCTAGAGATGAATCTCCA AAACCTTTCTATAGCAAGAAAAGTTTGCCTTTAAGTTTGCCCCGCATTCA CGGCGATCTTTAATCGGATTCAGAAATGTTCAATTTTGGTCATAAATAAA AATCGATGATGTCTAAAGACATGATTTTTCCTTTATCTGATGATGAACTA AAAAGCGAATatacagtgaaaatttcaaagttctacTCCTTTCCAATCCG GAATAATTCCaattccgattttgagggaGCTCACGCGGGATGTGGTGGGA TATTGAGGGAGCTGAAAGTAAACATTTCCAAAATTATCCGATTTTGAACA ACTGtcttaaaaaaaaggttttgtgtTAAAATTGTACATACTAGGGCTTT TTTCACCCAAAGAATGGGGTTATTTTAAGAACTTTTAcagcactttttac aaaaatagactttcgatttccccgatttttaaacattactctAAAGATCG CAGTGATTTAGAAATAGAAAAGGGTAacgtgttctggatgggaaataagt ggtatCATTTcacttcatttcccatcctggAGTTTCGGATTTATTTAAAT CAATACGACCAATAGTATTTCTTgctttttcaaatctttcagtaACCTAA TTCACAGATTTTCTAAGATGCATTGCTCTTTCCGGCGCTTTTAAATGCGA TCGATGTGAGCCtcgatttgaaatttgattatcACTCAAACAAAATTTGT GAATTGATTTCATGGACTTCGTTCGGAACAAGTGAATTGcacaaactcga acccagtcatggtttcagcccacttttcaggtgcccccattgaagcATGG TGCACCCAACGAgttaggtccccttgagaaattgctttgaggTAGGTACC CCAATCAAGCCGataattgaaatattttgaagtattcaatttgaaaaata tacacagcccccagagcctccatcaaaagtaccccaaagaattgcaaaat aTTAGCCCCCAACCCCTAACCTGTCCTAGGTGCCCTACAGATTACACTAA GCACTCCCTTATTTCGCTTTTATTGATTCTGATATGAAAGCGCTCACGAT TGTATCTATCAGCATAAAATTACAAATCCATGTAACTCGCTCGGGGTATG AGATTATGAATTGCATTAATTCGttctaattttttcctttcaGTCGAACG AACATGGTTGGACTCAGAAGCAATGCGATGACCGGTTCCTACAAGATATG ATCAAAAAATGTAAATGCAATTACTACAAATGGTATCATACAATTAAAAG AGGAGATTGCATTGCCTGGGCGCATGTCTTCTATGGGGCGGTACGAGCGG GCGGTCACCAGTTCATAGAACCACATAATATCAATCAGAATTGCTATCGA CAATGTATGATACCTCTTGCAAGTCCACATGTTGAAGTTACGGAGTAATT GAATGTGGAATGATTTCATGCAAATTGTTTTTGATATTGCATCCTTAAAT GTATGTTATAATTTTGAACTTGAAAGTTAAAAGTATATCCTCATTCTAAA ACATAATGACTTCATTGGTCTATTCaatttatatccatacaggggggtga aGGAGCTTTTCCAGAGGCTAATCTGAAGAAAAATGTCCTTGAGGACTAAG GAaataaagtttgtttatttttccatGGGTGAAAGACTGGTTTGGAATCT GAATGTTTTCATGTACGTTGTTTTAGAACATTTCCTTTTGAACAATTATG TTATAATCTCGAACTTAAACATTTAAAATACACCCTATACCTGCCTATAC ACGTTTTTAAAAATGGCTTTCATTTTACAGTATTTAACCTTAAGATACCG TTGGTACTTTTCATAAGTTGGTGAGTGTTTACAAGTTTTGAACATATTTA TATTATTGTAAATCTTTCTATTTAACAGAGTTAGGAATAAttccaacctc gttccctgtgtgTTATCAGCTTTTGTTATGCTTGATAGCGCTAGACTGGC GTcgatcagtaacgtaaataaagcctggaatacacggggacgaggttgga aTAATATTTGAAAGATAATCTTTATAATTGATCATTGATCTTTGaataaa tttacattattttagaaaatctaacgaaataaaaaaattgaaataaaatt ttataaaaaaaatcgtcCGTTCTTTTCACCTCTCATGTCAAAGCATTTGT GTCAAATATTCGAAAGAGTAATTCGGAGAAGTTGGTTTCTTCTCTGGATC AATTAAAAAAGTCGTTTCCATTGTAGAAGCGCTTCGATCTGGAATTTTAA TCCGGATATCTTGATCAACGGCGTTGTCCGTATTGTCTCTATTAGAAGGA TTTCCAGTTTCCGGGGTTGTTCCGTTTGCTTGGTCCGAGTTCCGTTTACT TTCCGATGTATCACTTTCCTCTTCCTCCTCTGAGACATTTTCGGCTTCCG GCATTCTTTTACCCGTCTTAATTTTATAATTACGTAATGCTTCTTTAGCC AGAAATTCTTGACGTTTAATTTTTAAGTCTAGTGAGCGTGGACGGTCAGG GATGATCCAGGCTAAAATACGACCAGCGGCTGATACAATCCATTGGAAGA GGAAGGCAAACATTAGCCTGATTGTCATTAAATACCAATGAACCATGCTA AACTCGTGCGATTCGTTGTTCACGTGGAAACCAGGATATCTGatattgaa aatatgaaaatctttaaaactgaaaaatttagaTCATTGTACatttgtga aaataaaaaatctctacaatcaatcaatcaatcaatcaatcaatcaatca atcaatcaatcaatcaatcaatcaatcaatcaatcaatcaatcaatcaat caatcaatcaatcaatcaaatagTTACCTGCACACTGTCTTGTTCACCCT CTTAAAAACATGCGTCTGCAGAATTtcaatttccggcatattcaACGGAC TCTCATCTGGCGAAAAATCGGAAATATTGAATTTAGATAAACTCCATTCC ACATATCCGGTTAACGTCATATCCGGACTATACCGGTACTTGTAAACCAA ACGTGGAATGAACTCGGATGTTAACGAAAGGACGAAACCATTTACCAAAA CGGCAATCTAAAACGAATGTGAAATTACGTTACGTGGTGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003728TCONS_00003728Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003728-proteinTCONS_00003728-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:224429..230168 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.16 0.16 0 0 0.89 0.54 80.85 84.98 75.09 73.94 42.15 44.1 4.33 5.2 0.3 0.51 6 3.57 3.42 3.6 0.04 0 0 0.09 0 0 0.04 0 0 0.06