XLOC_002011 (gene) - C. hemisphaerica

Overview
NameXLOC_002011
Unique NameXLOC_002011
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000030:254204..260975-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002011 ID=XLOC_002011|Name=XLOC_002011|organism=Clytia hemisphaerica|type=gene|length=6772bp|location=Sequence derived from alignment at sc0000030:254204..260975- (Clytia hemisphaerica)
GAAAAAATAAAGAATTTTTATCAAGTAAAGACATTGAGAAACCTGAAGGA TTTGTACCAAGTGTAGACATCGGAAAACCTGATGTCATGGAGAATGATTG TGGAAACCAAAAAATAGAAGGAGGTAAAATAATTAAGGTTCACTGTGAAT CGGAAATGCTATAGTGGGCCGTCAACATAGTACGTACGCACTAAAATGTC GAAAATCGAGTACCCCTCTCCCCCTTAATGCGTACGTACTATGTGGACGG CCCCTAGGTTAAATGATAGGTTGTAGTTCTGCAAGCTTCTTCATATATTC ATGTTCCACCTATCAGTAAAGAGACATTCCTTGGGACCATTCTTTAATTT CCTGAGTGGATTTTCTTTTGCTCATTCGATAAAGAAGAATGTCTTCAGGG ACTAAATAAAGTGAAAATTACATATTATATATTTTAAGATATCAAAAGTT AATCGTTTGGAAAACCTTTTTCGATAAGACTATTTTTACCACCAAAATAT ATATTACCTGTCTTAGTACTTTTAATTGACTGAAGTGGAAGTGGTGAAAC AAATTCTTGTAGATTCAGGGAAATCAATGATTAAGTGACTTTTATCAATT GCTTTTTAGCGGAAAAAGTCGATGGTCGTCCTGAAAAAAAGAAAAGCAAA TCATTGAATACTGGAAACAAAGAAAATGACAACATCTTGAAAGCTGTTCG TGAATCCACTGATCCCGACTCTTACCCAAACAAACTTCCCGGATATTTCC TTTTAATCAACAATGAAAATTTTTTGGGTAAATATAACCTTTTTTTAGTT CAGACTATTGGCAAATAAATCGTATTCAAAGCCAACACTTTTTAAATATC TGTTGAGAGTGTTACAACCGTCCAAGAGCGCTTAGAACCTAAGAGATACA GCACTACTTCCTTTAAGCTGAAAAGATCCGGTCCCTTTACTATAAAGTCT ACTGCATTTTAAATCTTTCGAAATATTTTTTTTAACCTTTCCTCTATTCA TAATTCTACAGAATTACAATCGAAATATATTGAGACTTTAGTGTACCTTA AAGTTTTTCAGAATTTAAAGCTCGGGCCAGAATTGCTATTTTAGCACTTC CACTTTCTTCCATTGAATATTTCGATTTTTGAGGGGTTCGGTGGCTTTTA GGCTTTATTCCAAGCCTGATCGAAACAATTCTGAGCTTTTAAATCCTGAG ATCCTGAGGTCCTAAGTCGTAAGTCACATGTTAAAACTCAGAGTTAGAAT TCTACTTTCCAACTGTAGTTTAAGGCGCTTAAAAATCATTTGTGGTGTTT AAAATTTAACAGGAAAATCCCCTTTGTCTCAAATATTTTACGTGGGATTG TAGATAAACGAACTGACACTGATGACACTGTTAAGAGACTAGGGTTATGG CTCTGAGTGACACTCCTCCCTTTAAGCTGGGCAGGTCTTTTTACCATAAG GTTCCCATGCTATATTTTAAAGCCTGCTTTCGTGGTTTTAATTTATTTTC AACCTTTCCTTTAATTACCCATCCTACAGAAATGGACAAACGAACTGGCA CAGATATTGACGCAAGGAGTATAACAGTTTTATTCCAAGATATGGGTTTT ACTATAGAAGAGCACAAAGATTTGTTATCTTATAAAATGAGACAAGTCTT GCAAGAAGCAGGCGAAAGGAGTTATGCGAAATATTCCTGTCTTATCATTT GCATTTTAAGTCATGGCAAGGAAGGTGAAATATATGCTGTTGATGAAACA ATTCCTGTTAAAGAGATAACACTGTGTTTTCATGGATCAAACCTAGGTGG GAAACCGAAGATCTTCCTTCTCCAAGCTTGCCAAGGTATATCTCTTTGTC TGTTATTTATTTTCTCCTTATTGAATAATAAACTTTCTTTCAAATTAAGG CCTTTTCGATCATATTAATTTATTTATTTTCACCCAACTTATCCTCAAAT CCACAAATTGAGGCTTAGATTTCGTTTCAAAGCCCTTGTCATTTGTCCCA AATTTTTAAGTTTATTTATCATGATTTATGTAACAGACATGGCAATTTAA AAAAGAACGCCAGGCTAACGAATTATACCACATTGACTTTCAAGCCCGCT AGACACGAAACTCCTGGATGGGAAATGAAGTCACTTGTTTCCCATACTAA ACACCTGACCCACGCGGTTTTCACACAAAAGCTACAATCATCGACAAAAT ATTTGAGACAGCGGGGATTTCTAGGCGAACTTTTAAACACCACAAATAAT TTTTAAGCGGAAAGTAGAGTTTTAACTCTGACTTTTAACATGAGACTTAA GATAAAGGACTTTAAGATCTCAGGATTTAAAAGCTCAAATTTTCTCTGAT AAGGCTTGGAATATAGATTAGAAGCCACTGAACACCTCTAAAATCGAAAT ATTTAGTGAAAGAAAGTGGAAGTGCTAAAATAGCAATTCTCACCGGAACT TTAAATTCTGAAAAGCGTTAAAATACACTAAAATCTCATTATATCGCGAT CAAGATTTCGAAAAATATGAAAACTAAGTTGTGCTAGATTCAATCCGTTA TTCTAAATGCGAATCTTAATGCTTCACCATTTCTTGCTTGAGAAAGGTTG GAAATTTATCTCTAGTAGTGGGGTCGTCTAGCATAATTTACGGGAAAACA ATAAGATCTAGCTGAAACTTTCTCCAGACTTTCTCTATAGGATGGTTATG CCTCAGGAAAAATTCCCCTAAAATCCCACTGGNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNCATTATCAAGTATACCATTCGAAAGCTCTCGAAAAACTATATAG AAGACTTTTAAACGGGTATAGCCGATTTCANNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNTCGAGTTAGGTAAGGAAATCAGCTATAACCGTTTAAAAGTC TTCTATATAGTTTTTCGAGAGCTTTCGAATGGTATACATGATTTTGTCTG GAAATAAGTTTAAAATTTTCAAAAAATTACGCCCTTAGGATTTTGCCTGG GGAAAATAGAAATGTCCCAAAAAAGGGATGTTCCACCAGTGGGATTTTAG GGGAATTTTTCCTGAGGTATAAGCATCCTATAGAGAAGGTCTGGAGGAAG TTTCAGCTAGATCTTATTTTTTTCCTACAAACAGCCTGTATTTTTGTAAC ACGACCACACTATAGCCCCTTCGGGGCTTTAAAACTCAATGCGATAACAC TACCTGATAAAAAAAAAACATCTCCAATATAGAAGACCTCTTCTCACACA ATTCACCATTTTCTCTCTTAACCAGGTAGAGCTTTCATGAATACAGTTCA ACCTCGTGAAATATTGGCATCAAATAGGCCACCGGAGGACAATGATGAGC CACCACCAGAAGATAGGAATTCTGAAGATCTGAGCGAAAAACTCTCGTCA AAAGAAGAAAGTTCTCGTATCATAACATTGCCTTCTGAAGCTGATTTCTT GTATGCTTATTCAACTGCATTTGGCTTTAGATCGTTTAGAGGCCCGAAAT CTGGTACTTGGTAAGAAAAAACTAATTTTCCTTTTGTTGTTATAAAGTGA TAAATTTATTATCAAAGCTTTTTTTTCTGAAATCGACTACATTTGGTTCT AAAGTCTGTCCAGATATAATTGGCAGTGGAAACAAGAATGCCTGTAACTT TTGATAGTCAAATATGATTATGGAAATTTTTTTTGCTTGTTTTAGAGAAT CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNAAACACTAAACACAGTGGTCATGTTCA GACCAAGGTTTAAAGCAATTAGGTCTACATGTTTCTTTTATATTCCTTTT GTATTCAACGGCACGCTTCTCATTAGTTAAACCAAAGTTTAAAAAGGAAT CACCCTCTGGTTTAAAAAAAAAGTTTTTACGATTTTGTTACAGTTTTCTG AATATAGACGAAATCAGAATTTGCGAGTGAAAAGCATGCTCCTTTTGTAA ATGAAGAAAAAAGAACGTGACATTTATGACTTAGAGACGCTTGGAGCATC TCTAGCAGTAATGGCTTCAACGAACACGAATTAGTGTTTTGCAGAGGGAT TCCCTGAAATCTTTTTTGTTTCAAAGTATCTCAAGAGAGAAAATGACATG ATTTCAAGTTAGGAAAGGAGATTCCTCGAGATCGCCAATCGATGATGACA AAAGAAAAGTGATTATAATTGAATTCCCATACCAACAAAGTACTACTTAA ACCTTAAACTTAAACTTTCAGGTCTGAACACGACCAGTTTGGCTATGAGG TCATTAAAGAGATCGTAAAATGTGTTATGATCGAAAAACTGTTTTATCAT ATCACTACCCCCGTTTTTAGTAATANAATTTCATGGGAAAAGAGTATCTA GTCAAATTGGGTACATGTTTGGGGTTACAAGAATCAATCTTCTCAGCAAT AGATAATTTGAAGAAGATTTTCAAAAATGATTTCTCCATTTTCAGGTTCA TTCAATCCTTTTGTGAAATTGTACGTAAGCAAGCTCTAACCATGGATGTT ATCCGAATACTGACTCGAGTCAATTTAATGATATGTAGTAAACAATCCAA AACAAAACGCCAGGTTGTCTCAGTAGTTACTCAATTAAGGAAAGAATTCT TTTTACCAATCCACCTCGAAAAGACTGCTGCGGATAGTATAACGTGTTGA CGAATGGATGGTTACGTAGACTAGCAAGCGTCTGTCTTTCCTCGTACACA GGAACGTGGGAATGTTGCTTATAATAAAGATTTCTTATTAAAAATAGAAA TTGCCGCGGGAGAGTGGTTTGGAAAGACATTTGTATTCAGTGAAGATATA GACATAGAGCCCATTGCATGTTTAATCTGCAGCGAAATACAACGACGTGG TTTACTAGTCTAATGGTAACGAGGTTTTTCATAAAGTTTTTAATGTCGTA CTGGGTCTATTGCGCAAGTTTTACGCGGGTTTTTGAGAAGTTACGGGCTA AAAGTCATGAAATCTCAGACATGGGATTGTCGAAACGCAAGTCCTCGATA TCGATTATTTTACATGATTGAAATTTCTTGGCGAGGCCTAAAAATCTGTT CACCCCTGGCGATATCACTTAGTGCTTTACAAGGAAGGAGCTATTTATTT TTCTGTATTCGTTTTGTAAGTAGTATATGCTCGTAAGTGTAATGTAGTTT CCCAAATTATGAAGAAAAGAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003605TCONS_00003605Clytia hemisphaericatranscript
TCONS_00003604TCONS_00003604Clytia hemisphaericatranscript
TCONS_00003603TCONS_00003603Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003604-proteinTCONS_00003604-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000030supercontigsc0000030:254204..260975 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CASP6caspase-6 isoform alpha preproprotein Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.5 0.54 0.3 0.6 1.41 0.85 2.29 2.07 3.88 7.8 3.91 2.78 5.9 3.85 9.27 8.53 7.07 7.01 7.22 11.74 3.37 3.49 5.64 6.58 9.22 11 12.85 13.79 6.86 5.93