XLOC_001993 (gene) - C. hemisphaerica

Overview
NameXLOC_001993
Unique NameXLOC_001993
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000030:768339..772468+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001993 ID=XLOC_001993|Name=XLOC_001993|organism=Clytia hemisphaerica|type=gene|length=4130bp|location=Sequence derived from alignment at sc0000030:768339..772468+ (Clytia hemisphaerica)
AAGTCGATTGATCACAAAAAATCATGGGTAAATATTTGTGATATTCGTGg
agtaatgttttatacggaagcacccaaaaagaCTGGCTGATTGCCACttg
ttttaaatttaaataatCTAACTAGTGGCAAACACCCGGGCTaatttggg
tgcttccgtatatagcaaactctctctctaattcgaacctctattcttcg
aatctttctataattcgaactaaaatatttgtcCCCTTAGCAAGAAATTA
GCATctaactttccatttgcctatggcctagattaggggtagaaaccaat
TAAGTTGTCGGACGGCtgagaagtaagtgtgagtcggTACTTATGTTTGG
CATAATtttatggctaatcctcgaatagtaagttttggggaaaatttgtc
ccgataaatacaatattagtataaataagtgaggatcgcctacaaccata
actgcagggagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCTCAGTTGGCGGAGGGCGGCCACCCA
GCCATTCGAATACTGTATGTggcgcttatcaaataaaagttaaaccgcga
tttaacctgtgttaaatccaaataaaatactttctgtaattcgattattt
cattttgaagaaagtTCTTGGTCACGGGTCaagaagatcgaattagagag
agtcaattataaaacattacgtcatgaataaaCATGGATTTCTTTGACTT
ACAGAATACGAATCTGTTAATAAGTGTAGCTGTGATAACGTTTCTGCTTC
TCTACAATGTCCTCTCTTACTGCAGTACTGAGGTATTTGACAGTCTGAAT
GTTTCGTACAAGTCTAAAATGGAAATTGAAAACATGtatgataaaaaata
ttttgcaaaaatattgaaatgtcTTATCTATTCTTCTCATTCAGCTTTCT
TTCTCTTACGGGATAGCTGTCCGAAAACTATTTCAAATCGATGACATCTT
TGAATAAACGTACCAGTCTGCAAGTTGGACCATTTTCATGGTGAgaaaaa
ttaattctttcagtACAGCTAAATTTCCTTCATAATTATGAACGAATCTT
TCGGTTGCCGGTAATTTCGATTGAGAATATTATCGAAAAAATAAGCATGC
TTAACAGATAGATCtcgaaaagagctttccaacgaaccCAAACACATGAC
ATATTTAACTAAAGCCAAAGCTGAGAAAATTGCATTTGAAGATGACGTAT
CGTTGTTTTGAAAGAATCCTTAAATTTCAGTTTCCTCCAGCAATGAAGGA
GTTAATGAGGAAACAACGTGTCCTCAGCAAACTGGAATATTACCTACATT
TACTAAAGACAGATCCTTGGTGCAGATATTGCCGTTACATGTCAATCCTT
TGGCACAATCACTGTTGTAGATACATTCCTCGTTCCGCTGGAAGTGAAGG
TATGGAATGTAAAGTTTAGAGTTTAGATGTATTATGGTTGGAAGAGACAC
TATAGAGCACCACACGAGAATGatcttttccagaaaaatttaaatatggG
GGTTAGAGGATATAatagtttttggaaatttaacCCCCGGACCTTGTGAC
TTTTAAGCCCCGGAAATTAGGTCTAACCCACCagacaagcattagttgac
ccctggacattcaaaattaccctcaaacagagcaagtttaccccccggac
aagtcaaggtaaattttgtaaatttttcactaccccccggacactatatc
ctccatccccatgtaggaacattttctggaagagcccaattcatgatatg
caccattgcaNgacactatatcctccacccccacgtacgaacattttctg
gaagagcccaatagtGTCTTCAATTCAGTATttcagttgacgctctctaa
ttcgacgcaTACACTACttttcgataggctcccttattcgatcaaattga
aagtcgccgtcaacaagaaactcttaaaTTCGACACATACACTACttttc
gataggctcccttattcgatcaaattgaaagtcgccgtcaacaagaaact
cttaaaTTCGACGCATACACTACttttcgataggctcccttattcgatca
aattgaaagtcacgtcaacaagaaactcttaaaTTCGACGCATACACTAC
ttttcgataggctcccttattcgatcaaattgaaagtcgccgtcaacaag
aaactcttaaaTTCGACGCATAGACTACttttcgataggctcccttattc
gatcaaattgaaagtCGCCGTCAACAAAAAACTCTTAAATTCGACGCATA
CACTACttttcgataggctcccttattcgatcaaattgaaagtcgccgtc
aacaagaaactcttaaaTTCGACGCATACActacttttcaaaaagttcca
ttttttgatcaaattgaaagtcgctgtcaacaagaaactctcgaAAACGA
TgctctattgtttttttttcgattgaAAACCAATTCCCCTTGACAAATcg
aagtacatgttttttataagcaagtgtctgtccctatatcaggctcgcat
tgtGCTAAGCATTCTATTATTCTTAAGCAGTAGAACCATTGtataggtac
caaaaactgagcctgcatatgcttataaacgttatgcttataaaaaaaac
atgtagagaGCGTCAACCGTAGATCATAAACTAAAAACATTTGAACTCAT
AAATTTCGCACCACTAATACGCTTCTCTACCGACTGCATTCATGAAATCG
TTTGAAACAGCATAAAATTTTGGAACACTTCAGTAACTCTTTTTAGCAAA
TACGAAATACCGGAACTATGCTAGTTCTAATTGAGAACTGGTGAAGTTAT
TGTTCTTACCTTATAGAATTTGGCTTTAGGCATGACATCTAGAGCGACGC
ATTTATGGGTTGCTTGCATGCAGCCATGGTTTTGTGGACACCCATCGCTA
CCAGAACAACTCTGATGAAAGAAAAAGCAGGTAGAgatatttttgttgaa
attctaCAATTAACTTATGGATAGTTGATCTAACATAATCTAAAAAACCG
GTTACTGCCTCGCTAGCAGAATTACGTTAAAATGGAAAAGACATTGAATT
GAAATTCATGCttcaacaaaattttgagaCAGCAATGTGTAATTTTTTGC
CGTTTGAAAATTCCCCGGGAGCTATTTAGGCAAAAATACGTAATTGGTAT
GTGTGAACAATAAGAGTCGGTTTTTGACCTTCCCAAAAGTCTTTGCAAAT
GttagaaaaagaacaaaaagaccAAAAGACAAAAAGACTAAAGGTCGCAA
TTTTCCCCATTTGGGTTTCTTTAAGTGTCGCTTTTGCGCCAATTTTGTCG
TTCCAAGGAAAGCTTTTCGCACAAATTTAGCCTCTCGAAGGGTTGGTCCG
CGCATACCCGAAATTTTCCAACCCTATTACCCCCAGGGTCGGAAACACTC
TTAACCCTTAACCCAGTTATCTCAATACAACCTGAGACTCCATGGATTTT
TCACCTACATCATAAGCGGCCGTTAATATCATAAGCTCTTCGAAACTCTT
GGCTTCTTTACATTTGTTCTCTTTACATAGATATGGAATATTGCAATCTG
AATGTTGTCGGCACATCACTGGCATCGGCTGCAAAGTTATATAATGAAAT
AATCAGTAGAAAGTCAGGTGTATTTTTCAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003570TCONS_00003570Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000030supercontigsc0000030:768339..772468 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0.69	0	0	0.41	0.41	0	0	0.37	0.38	0	0	1.31	1.33	0	0	0	0