XLOC_001757 (gene) - C. hemisphaerica

Overview
NameXLOC_001757
Unique NameXLOC_001757
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000025:483986..493501-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001757 ID=XLOC_001757|Name=XLOC_001757|organism=Clytia hemisphaerica|type=gene|length=9516bp|location=Sequence derived from alignment at sc0000025:483986..493501- (Clytia hemisphaerica)
GATTAGTACTAGTAATCGTATGGTTTGGAGTGCAATTAACGATTAATCAC GAGTAACAAAGGAGAAAATAGTAATTTANATCACAAATACTAAAGCACAA GTTTTTGAAAACCCAAAATTATATATTGGTGATGCTTTCTATAATGCTCC TAAAGCCACCATCAAAAATTTCAAATGGATAAATATTGGTAAGAGCATTC TGATTCCAATTAAACGTGAAACTTCATGCGATTTTTCGTTAATTTAGTCC TTTTTTTCGACCCAATGCAGCTGTAATCAAGGCTCTCCGAATACCTTAAG ATATATATTTATCACGTGTACTATATTTTCGCCAATCATGAAATTGAATT TTGTGCTTACGANTCTTTTGTTTAAAAAGAAAACATTGCAGTGTAATTTT TCTTTGTTTTCAATTAAAAGAAGCTATTGTAACGTAAAATTTCTTTGTTC TTTTTTATATTGAAGCAAACAATGTCTTTGTTTTTTATTATATAGTANCA GTGTTAAATTTCGAAATCGAATGTTTTCATTAAGTGCGGATTAGGCCACT GACTTTGCTTAATAAACAAGGACTTAAGGCCGGTCTCCACTTTCGTGCGA CATGTGCAAAAGTTCTATGACGTTTTTGTAAGGTCATTGGTGGTTTGGAA AATGAAGCAATTCCATTGGTCAAAATTGACGTAACGGATGAAAAAAGTAG AACTTCCTTCAACTTTTTTTTTTTTGTTCGCGCAAAACTTGTTTATGACG TAATCTTTTCTTCAGGCAAAAAAGGTTAAGAAAAAAAACTGTCGCACATT TCGCGCGAAAGTGAAGACCAGCCATTAGGATGTAAAAAAAACGTGTATAG ACCTTAGAAAGTTGTCCGTCGACGTGAAAAAAAAACATCAAAAAACGGGG TTAGAAAAATCTGAAATGCAAAAAAAACTTTATAAAATATAAAATGTTTC TCTTCATTCAATTTTTTTACAGAACCACCAAAGCCGCCCGTCAAACCACC CAAACCATACGACTGGTATGGCATCAATGAACGTAAGTAAAACCATCAAA TCCACTGAGCCTTCTATACAAGCCTTGGATGCAGTTTCCCAACTCCGGTT AAGCCAAATCTTTTAAGAGCGGTATTTTTAAGAAAACTATTCGATGTGGG TGTAAATGCACCTAAAGCGCTAGATCTACTTTTCTTCGAATATTTTTTAT GTAGCATCGTTTGTTTTAGACATTGTTGTAAGCACCACATTGACTTCTTT GCGGGTAGCACTTTTCTTGAAACCAACATCTAAAGATGGCGGGTATAACT ATACTAAGGTTTATAAAAGTCAGTGCTCTCGGCTAGCTTTGGTATATCTT TTTTTCCAACGGGTTTATCTTATTTTGAAATCAGTTGTCTTTCTCGACCT TACAATCACCGTGTCACTTTGTTTAAAGAAGACATTATAAGCAATAATCA TACCAACAGACGAATGGTAATCTAACGACACCACAAATTGTTTCGATCTT TTTATTACAATTAGAAGTGTATACAAATACCAATTTCTAAGCCGGCTTAA TAAAAGCATTAACTTGTTCCTCGGCTTGATTAGTAGCTGAAAGTTTTTAC AAAAAATGTCCGAAAATGCTATCGAATTAAATAGTAAAATGTTTGGACTG CAACCGGCCCTTATATACAATATACCAATCTAAAAATGTTTACACAAATA ATCCAGAAATTGAAATATTTCACAAACTTTCTCAAACAGCAACTGATCCA AAACGAAACAATTTCATTATGGGTGTCCCAATTATCAAGAAGGAATTCTC CTTACAATTGGACATTAAACCAACTAATGAGAAAGTCAAAGCCTGGTCTA ACATCATGAGAATATCTGCAGATCCAACTAACAATTGTTGTAAAGTTGGA GCTCGTATCCCCGGTATCTGGTTCAATCCAAACTCCCGAAGACTCCATAT CACATTTGCAATTGGTAACAATGGAAATGTTTATTACAATTCCCCTGAAT TACCACCAAACAAAATTGCCAGAATTGGATTACAACAGGTATAACTTAAA TTCTAAATACTTCCCGCCCCCAAGCGGCAGTTTTTTGGGAGGGGTGTGCC TAAGATACGCCTTCTAATTTCGGCACCCCTTTCCGCCTAAATAAGTTTTT ACCATAAAAAAGAAAAAATCATTGAAAAGACTTTGTACTCGCTGAGCCTT CATTACTCAAAATAGGCCAGCCAAAAATGCTAAATTTCGAAATTTAGCAA TTATTTATCAATCAATTTTATTGAATTCGACTTTTAAAATCGTCAATTTT TTGCCTATTTTGGGGGTTAGGAGTTCTGCCTATAACGTCAGCTTTTTGGC AATAAACATTTTTTGCCAAGCGTTATTCGTGGGCTCCCTCTCAAAAAGGT TTCAAAATCCTATCTATCTTCGAGCCAATCAAATGCGGTTGCGTCCTACG AAAGGTGCTATCGATGGGGTTGGCCCCCTAATATTGCCCTAATTTTTGGC AAGAGAAATGCTGCTGTAAATTTCAGTGTAATTATTTCTCATTATCCAGT CCTTTAATAACGATTTTATCGGGGAAAAAGGCAGTACCAGAAATAACTAC ATAATCTCTTTTTTCGTTATGTTACATAACTAGGTCAAACAATTTGGTAA TAACTACAGATATTCTATCACCTTGAATGGCAAAGAAGTTTTCCAGAAAC CAAATCCCAAGGCCAGAGAATTCAAAAAAGCCAAATTATATGTCAGTGAT GAATACTACGCACCAGCCAAGGTCAAGATTGTCAAGTTGAAATTCCAAAA CACTGGTAGGTAGAGTCAGATTAGAAAAATGATTTTTTACACTCGCATAC ACATAACTAAAGTAAAGAAATTTCTAGGATCTAATGGTATTTTTGTCTCG ATCCTCCGTCCGATATACATAACTACCGAGTTTATGTATGTTTGTTTTTC AGCGACGGAGACGGTAAGGTCCTAAATCGTCTAGATCCTGACCAGCTGAG GACGACGGTAAATCAGCACTTTTACCGACCTTGATAATGCGGGTCAGAAC TGCGGGTTATTCCAAATCGCTTCAGTTACTCTACCGTCCTCAAAAGTGCA AATACATAAACTCGCTACTAAAGTAGATCGGCACCAGTGCTAAAATTGTT CATTTGAAAAAAACTAGAATTTGTCATCTACGTGATGGCTTTAAAATTCC AGCAGGTTTTTCCACTCTAGACAGGAGATATGACCTATCAAAATAAAAAA TATTTATCTGGATTTGGAAAAGCCAATTCTAAGGCTAGAGGTGAAATTTC GCTGGTCGAACAAGGCACCATCCTTATTTTACATACGCTGTGAAGGGGGG AGAAGAGGGGGGTTTAGCAAAAGTGTACGTCTATTGTTTGAATATTGTCA TTTCTGTTGTTCTCTCTGAACAAGGGTGTCAAATACATTAAAGGAAGAAA TTTTGGCAGGAATTTAATTTGGCGGATGGCCGAAAAAGTTTTTTCAGAGG GAATTTAATTTGGCGGTTAACTTGAAAATTTCAATTTGGCGGGAATTAAA TTTGGCGGATGAAGATCATTTTTGTCCAAAAAACGCCATTAAAAAAGGAA AAACCTGTGTTAAAGCCTGAATTAGCACACATTTGGGGGAATAAATAGAG CAACTTAAATTTGGCGGATGACGGAAAAAGATTAAATTTGGCGGGGACTT AATTTGGCAGATTTTGACCAAAACCGCCAAATTTTCTTCCCGCTAAAATT TCTTCCTTTAATATATTTTGAAATTTTTGAATACGCACTATATGGATGAC TACTTTACTAAATATTTAACCAAAAAATTAACTTCTCATTTCATTCTTTT CTTTCAGAGCCAAGCGACGAAGATGCACCAGGTAACAAGAATTTTTTGCA AATTGAATGTCCAAATTAGCCCAAAGTTTCTTCTCGCTAATATATATTGT GGTCACTAGCCATAAAATTAATTAACCTTTTTCAGTCTTTTTTCCACTTT TTAAATATTCAACAAATAACAGACCATTCACCAGAATATCCTAAACTATA GAAATTTTCTTGAATCACTTAAACAAATGGTCCATTAGCAAGAATGATGG ATGACCTGACAATTTTCAACGATTTTTTTACGGTCTTAAGCGCCTTTTTT TGAATTTTGAATTTTAAATCATATTTTTTTTCTCATTTTTAGCACCAGGA GAGCCTTTCGAACGTGACGGATGTAAGTTCTTTTTAAACTCTTCATTTTT TTAATCAGTGTTGAAACTGTATTCAAGAATTCGACGAAGATTTCCCATAT TCTCCCAATGTCTACAATACAGTCAGAAAATATTTTAACGAAAAATCTCA ACGGACGGATTTTCTATACCTTGCATTGCTGAACTCCAAAGAAAATAAGG GTCACATCAGTAAAAATATCTTTCCTAAAGAACAATTCGAGGATCTGAGT ATCAAATAAATATCAAGAGGAGCGTTCCCAGCTGGCACATAACGTTGTTT CAACGTTCACCTAGCGTTATATGGACGTTGTGAACGTTAGATAAACCTCG AATAAAACGTTGTTTGCCAGCTGGGTTTATATTGAAGGGGTGTTTGTTCG AAGTAATACGGTTTTTTAAAGTTTGTGTTCTGACGATGAGTGTCTGACTA AGGTAGAATATATTTTGAAATCAATTGTTNACGGTTATTCAAAAGCTTGT GATCTGATGATGAGTGTCTGACTAACGTAGAATATAGTTTGAAATCAATT GTATATTTTTTCTATAGTGTGGACTATTGCAAGAAACACATACATTGGTT CATTCAACTTGAAGAAGGAATGGTCTGTCAGTTTCGATATCAAACCAAGA GGTACAATTGCTGGATGGACTAACATCATTCATCTTACAAGCACAGGCAA AAATTGTTGTGGAAAAGGAGATCGTATCCCTGCTATCTGGTTTAATTCAA GAACAACCAAAATGCATGTTTGTTCACAAATTGATAATGCTGGCAACCGT TGTTTTAATGCTAATCCAATACCATTGAATAAATGGAGTGCTGTGGTTAT CAAACAAGATAAAGACAACAAAGGGAAATATATCTATACCATCACTGTTG CTGGTAAAGTTCTGAAGAGAATGGAGAATAAGAAACCCCAGGAATATAAG AACGTCCGTATATTTACTGCTGATAACTTCTACCGTGAAGCCAATGCTGA ATTGAAAAACTTGGAAATCAGAAACTTAGGTAAAGATTTTTTTCAGATCT ATGGTTTAAAATTATACAGTCGGCTATAGCTTATTCGAATATTTGTATGA TCCGAATTTATTCCCAGTCCCCGTAAGGGAGAACCCTCTAAAAATATTCT CTATAATTCGAATCTGTTTATGATTTGAACAAATAAGATTCATCATTCGA GTTCGAATTGGCGAGAGCCAACTGTACATTCAAATTGGGAGAGTTGTGTA AGTTAATTTCTCATGATGTAATGGTTATAATATAGTTCACACAATGTACA TTATGTAACAACACATGGTCATTGATCACATATTCTTCTTCTCATCAACT CATTGTTTCTTTTATTCATTTGTTTTAAATAGTGGATCCACCCAAACCAC CGCCACCACCACCAAAACCAGTCATTCCACCGCCACCACCTCAACCACCA ATCCAAGATCCAGAAGCCGATAAGGACATCAAGAACAAAGGTAACTTTTT AGATGAACACTTTTTAATGTTCAATAAGAAACTGTTTCCGATTTGAAAAA AAATCTTGACATACGTATATCAAGAGCCAGGTATTTATTTGCGTCAAAAC TTCGGCTAATGTGCTGCTTGTTTTATGAGCCTCTTAAAATCACCAAATAA TTTTTCAAGCTCATTAAAAATAGATTTCAGTCGGCGGAATTCTTTAACGA AATCCATTATCTTTTATCACAGGTAAAGACTGTTGGAGAGGTTGCGGCGC CAAAGGAGGACCTTGTCCACAATGGTGCGGTAAAGACGGATATTGTTGTC GCCAAGGATGGGGAAAAGACCGTGGTTGTAATAAGGCTACTGCAGCATGT AAAGGATTCCATTGTTGTACTCCTATCAGTGAGCCACCAGCACCACCACC AGAAGATGAAACTAAAGAACTCAAAAACAAAGGTGAAGAACCCTTTCAAT CTAGTATAGTTTACGTGGTATTTTATGTGGCTAGGTAGCTCAGTTGGTAG AACATTCGATCCCTGATCACCGCCAACTCAGCGAATGAGTAGCTTATATT GGGTAATCTGGTCTAAGCGGTAACTTACTGAGAACTAAGGGTAGGTGTTG CGCTTCACCTCAACATTCGACCTCGCAGGTCTAGCGCAAATAGTTAAGGG AATAAACTTCCTCACTCCCAGCTCCACCGACAGCCACCAGATGAATATAC TTCAGTATTTTTTTCAATAAACAACACCTCCTAGAGAGTTAAACCATAGT ATTTGTTTTTAACTTGGAAAGTTTAAATCTCTTTGGTGTCCAAAGGCATT TCGTGGCAAAGAATTACTATTGAGTCGAGTTGAATGTTAACAACACTTCT GACAATCTGTTGTCTTCATATGTCACAACAGTAGACCAATTTTAAACGTA AAATACAACAACATTCAACGTCCAACTCATTCTTTAAAATTCACAGGCAA AAACTGTTGGGGAGGTTGCGGTTCCAAAGGAGGACCTTGTCCACAATGGT GCGGTAGAGATGGATATTGTTGTCGTCAAGGATGGGGAGGCAAAAAGGGA GACCCTGGATGTAACAAGGCAATTTCAGCTTGCAAAGGTTTCCATTGTTG TACTTTGACCAAGAATCCACCAGCCCCAAAACCAGAACCACCACCAGGCA AAGAATTGAAAAACAAAGGTAAAGCTCTTTAAAAGACTTTAAAAGTTTTG ACTGTTTTGTTGTGCATTGGTATGAATTGCAGTCTACCCGTCTGCCATAC GTTGTTTCAACGTACATCTAATGTTATATGGACGTTGTGAACATTAGATA GACGCTGAAACAACATTGTGTTGCAGATGGGTAACTTATCAATTGTTCAT AATATGGTTAGATTTTAAACCGAAGAAGTTTAAAGAAAGTCTTTCTTAAT AATCTTATTCTTCTAATTAGAGTCTATACTTTCTTAGATTTGTGTAAGTT AACAACAAACATCATCATTTCTTCTCACAGGCAAAAACTGTTGGGGAGGT TGCGGCAAAGGAGGACCTTGTCCACAATGGTGCGGTAGAGATGGATATTG TTGTCGTCAAGGTTGGGGAGGCAAAAAGGGAGACCCTGGATGTAACAAGG CAATCTCTGCTTGCAAAAATTTCCATTGTTGTACTTTGATTAATGATAAG GCATCAGATCCAATTGTACCACCCGCCCCCGCCCCAGTCGTGCCAGCTAA AGAAGANAAAATTTCCATTGTTGTACTTTGATTAATGATAAGGCATCAGA TCCAATTGTACCACCCGCCCCCGCTCCAGTCGTGCCAGCTAAAGAAGAGA AAGAGCTGAGGAACAAAGGTAATTGAAAAGTTTTCAAAGGCACCAGTTTC GGTATCACCAGTTCTAGATTTTGATGTATTAGCATATTAGTACGTCATAT GTCAGAATACAATCAAAAGCAATTAATCAGATAATCTATCAGTGTCTCTA ATATTTCAAAATTTTCGAGTAACTTAAATCAGACTGCTGTCAAAACACTT TCGTTAAAAATACAATCCCCTCAGTACTCTATCAAACTTCAGTTGGAAAT ATTCTTTAACGAAATCTCTATTGTCTTATAACAGGCAAAAATTGTTGGGC AGGTTGCGGCGCCAAAGGAGGACCTTGTCCACAATGGTGCGGTAAAGACG GATATTGTTGTCGCCAAGGATGGGGAGGTTCTAAAGATCCAGGATGTAAA AACGCCGTTTCACCATGCAAGAATTTCCATTGTTGTACTTTAATCAAGGA ACCTGNCAAGGATGGGGAGGTTCTAAAGATCCAGGATGTAAAAACGCCGT TTCACCATGCAAGAATTTCCATTGTTGTACTTTAATCAAGGAACCTGCTC CACCTCCAGCTCCAGAAGAAGAAACTAAAGAAGAGGAAGAAGGAAAAGAA ATTTCAAACAAAGGTAAGTGGTGGTCGAATGGTTTATTAAAGTGTGTATG TACTTCTTGCTACAATTTGGAAATCAATCATGACAAAAAAATAATCTGAT GACGTTTACGTGGTAAAGAGAAAGGACTTCAGTTGGCTGTATTATTTCGT TAAAGTTTATCGTATTTGTGGTGAAAAAATATAAGCGAGAAAAACTTTTC ACTGTCATAACCACAATGCTTATCTATATCTTATTTCTTCTCACAGGTAA AGACTGTTGGGGAGGTTGCGGTGCCAAAGGCGGCGCTTGTCCACAATGGT GTGGTAAAGATGGATTCTGTTGTCGACAAGGATATGCCAACAAAGGATGT GAAAATGCATTGTCTGCTTGTAATGGATTCCATTGTTGTACCGCTGTTAA AGGTAGGTCTTAAGGAGGATTTGAGGCTTAAAAACACCAATAAGTTGACC TGAACTTAATTTCTGTTTGGTATCCGTTTTCGAAAATAGTAATAAAATTT AGCATTGCAACATTCTATTTGAAACAAAATTCAAAGTAAAAATTATCCGT TAGCAAAAATCAAAAGTAATCATCTGCGAAAGAAACTTGCCAGCCCAAAA AAATTCTTCGGTATAAAATCTCGTTATCAATCGATTTTTTCGTCAATTTT TTTTCTAACAGATATTTTACAGATAGAGCTACATTTTTTTTGAAACTTTT CTCTATAGAAGTTGCACCAGTCCAACCACCACCAGCTCCACCAGCACCTA TTGTTGATGATGACGACGAAGATGATAAGAAAGAACTCAAAAACAAAGGT AAAACAATCGTTTTGTTGATCAAAACTTAGCTTTGACGGTCAATTTCTCT GTTATCTTGTCTTCTTTTATTGTTGACGGAGGTCGACTGGTTTACAGCTT TCAAAATCACTCAATATTTTGATTCCGATCAATCGAAAATGTAAAAACCA AAACACAATAACCTTCAAATTCGTGATATGCACCACTGCAATGTCTTCTG ACATTACATCACAGACCCAATAGCTGATTGGTTGTAAGTTACGTAAAATC AGCCAATGCGTCACTTTCAACCAATCAGCCGTTGGGTCCGTTGAAGACAT TGCAATGGTGCATATCATGAATTCTAACTATACCAACGTATATACTAAAA ATTTATTCTATAGGCAAAGACTGTTGGGGAGGTTGTGGCGCCAAAGGCGG CGCTTGTCCACAATGGTGTGGTAAAGATGGATATTGTTGTCGCCAAGGAT GGGGAGGNAAGACTGTTGGGGAGGTTGTGGCGCCAAAGGCGGCGCTTGTC CACAATGGTGTGGTAAAGATGGATATTGTTGTCGCCAAGGATGGGGAGGC GATAAAGATTGTGAAAAGGCTAGAACACCGTGCAAAGGATTCCATTGTTG TACACTCATTGATGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003185TCONS_00003185Clytia hemisphaericatranscript
TCONS_00003184TCONS_00003184Clytia hemisphaericatranscript
TCONS_00003183TCONS_00003183Clytia hemisphaericatranscript
TCONS_00003182TCONS_00003182Clytia hemisphaericatranscript
TCONS_00003181TCONS_00003181Clytia hemisphaericatranscript
TCONS_00003180TCONS_00003180Clytia hemisphaericatranscript
TCONS_00003179TCONS_00003179Clytia hemisphaericatranscript
TCONS_00003178TCONS_00003178Clytia hemisphaericatranscript
TCONS_00003177TCONS_00003177Clytia hemisphaericatranscript
TCONS_00003176TCONS_00003176Clytia hemisphaericatranscript
TCONS_00003175TCONS_00003175Clytia hemisphaericatranscript
TCONS_00003174TCONS_00003174Clytia hemisphaericatranscript
TCONS_00003173TCONS_00003173Clytia hemisphaericatranscript
TCONS_00003172TCONS_00003172Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003185-proteinTCONS_00003185-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:483986..493501 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.14 0.07 0.11 0.7 0.69 0.88 1.16 0.89 0.54 16.54 18.6 76.43 85.87 31.84 132.74 33.4 33.28 0.01 0.17 53.27 41.01 26.31 40.58 67.18 75.03 11.67 2.68 0.26 0.24