XLOC_001735 (gene) - C. hemisphaerica

Overview
NameXLOC_001735
Unique NameXLOC_001735
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000025:789002..797984+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001735 ID=XLOC_001735|Name=XLOC_001735|organism=Clytia hemisphaerica|type=gene|length=8983bp|location=Sequence derived from alignment at sc0000025:789002..797984+ (Clytia hemisphaerica)
AGGGTTTATACAatgtcaaaattatattttaaccTTTACTTTCATAGATa tgtaaataaaaagataattcatGTGGCACTTGTATCAAGTTCTTGAAACC TATCATATGTACATACTTTGAGAGCACCAAAGGTATGTATTTCTCTAAGT GAAATCTGAAAAGTGCCTGGGAAAAAGCTCATGTTGACCTCGTATGTTGA CCTATGttctttgccacggaaagtcatgtgacatctttttcaaccaataa gatttattAATTTCGAGGGGAAAACAAAcgctatggtttaactcactaaa agattatgtttactgaaaacacataatAAATCTTCAGTAAGTATTCTGTT GTACCCCAGTTCTGAGGTCATGCCGTGGCGAAGAATGGGATTACTTCTTG CCttccaaaagaaaattttgaggataTGGTTTactatcagtttttcatgc ttttTCAAATGGTACAAATTTCTCATACCTCATGTGTATACAATTTCAAA GGTTCTTCATAAAAGACACAGCTATTATGCACCTCAGTAATCTAATCATT GAAAACTGCATGATCTTTGTGAATGGCAAAGAGCAGCCATTTTTAtaaac cattattaaaaatgaatcagaaagtttttttctcttcttcaattttttta attgaacttCAGCAAAGACTTTACATTGGTAAGATTAATTTTAGCACcat ttattggacctacctggatgttctatgaaatttcatttttaaatatatta gtAATACAGAACTTTTattctatttaaaagatttggaactaatttttgcg ggttttaattttagcgttttttgcagtttttcgtcaaaatcgcgaaaatt tcgagagttgaaaaccgcgaagattaattcccgcgaaatacaaatttttc caattttatcgaaaaatttgaagtttATCATCATGTTCCAACAATGTTTA TCTCAATTTTGACTTCTTTTAAATTCTTCACAGATGGCGGATGATCTTGT TTTTCCTGAAGACGATTTGATGGGTGATTTTGATACCAATCTGGAGGATC TGCTCAACATCCCTCAACTGGTGCCAGTACCTCCTCTGGATAGCATGCAA CACAATATGCAAAGAAACTATGCCAACATGCAGCACCACATGAATAATAT GGGTGCTGCTCCTCAGACAAACAACAGTAGCTATCGACCCATAACTCAAC TCATGAAACAAACACAAGAGTTAGCCTCAACATTAGGTAGCCCTTTGAGT TCTAGTTTGAATCAACGTATGAATTACAATAACATTGTCAATACGTCCTC CATGCTCAACCAGCAACAGCATCACCAACAACATCAGAACATGCCAAACA ACATCCAAAACAGACTGATCGGGAACAACATGAACTATGTCAATCATACA GCAAATCAACAGAAAAGCTCGCAGTATCTTGTCGTTGGTGGTCAGCGTAT ACCAACACAACCTCAGCAAGCACTACCCCAACATCAACAATCCCCTACAC AACATCTATCTCAATCGTCCAGCTCACCACTTCATGCGCAAGGATCTCCA ATCTTTGACATGACTTCACCCTCTTCCCTACAACAGCAACATCAAAATAG TTTTAAGGCTATGTCGCCTTCTTCCAACATCCAACAACCTGTTCAGAAGG TTATCACCACCAATAACCAGCCTAAAAAAGCCATAGTTTTAACCACACCA CAACAAACACAACAAGTGCACCACCAACCACAATTAGCGCAAAACATTCA ACAACctaaaccaaaacaaactaCCCCACCTCAATTGATCTCGACAGGTG CCTCAAATAACCCTTTACAACAAAACGGTGTGATCATAAAAACAGCTGAC CAGAAATTGATGTTTGTCACTGAAGTCAACGGTAAAAAAGTCGGTTATGT GTTACCCAATCAAAAGCAACCGTCTTCACCAAACCCTAGTGTAACTGTCA CTGTCTCTACGTTATCTGCCACTCAATCAAACCTACAACAGCAACAACCT GTAGTCCAAACAAATATTCAAAAGCCAGTTCAACAGGCTGTTattcaaaa cactcaaaaaccAATTCAGCAAGCTATTGTCCAGAACACACAAAAACTCG CTCAGCAAACTATTTCTCAGAACATTCCGAAACTGATACCGCAAGCTTTA TCTCAGAACGTTCCTAAAGCAATTCCACAAACTATTGTTCAGAACACTCA AAAATCTGTACAACAACAGCAGTCTGTGATACAGAATTCTCAACAAAAAG AAGGATTGGCACCCAGCCTAGACAGCATCAAACCGTCCATCCAGAAAGAT AGTAAAGACAATACTATTAAACCTGCAGtcgaaaaaactttaaaagagaG ACTTCAAGGGTTAAGGAATAATGTGAACAATGCTAATTTAAGGACTCAGT TGAACTTGAATAAagagaaaaacgaaaaattaatATCCCAACTAAATAAT CATAACGCTTTACCTCATGTCGAACAACGTATTGTTCAAGTTCACACAGT CACACAACAAACCAATAATCCAGTATCAAAAATTATCTCAGACTTTGATA ACACTTTTAATAACGACCAGTCACCCCCGCCTACACCGCCTACGCCCACT TCAACTTTAACAAAAGACAATTTGGCTGCTTTAGCGAACAATAAACCAGC TGAAAACATGAGTTTCCTTGGAGACGAAGAAGACGGTCAGGATTTAGATT TTAGTGAAAGTGATTTAACTGCAATACAAGAGGACTCGGACGAGCCAATG ATAACATCTATTTCAGTAccgaaacaaaatgaaattgagGACGTTTCTAT GAATAATAATACAAATAACGATGATGAGGATTCTGACTCTTTACCTTTAT CTTTGTTAAAACATGAAGAACCAATTTCTATAGTTCGTGAGAATAATACA GAAGAGGAGAGCTCTGGTGCTAAGCCTGCTAAGCGGAGTAAGAAGTCCGA TGATTCAGTGCCACTTTCGGTTGTGGCTGCATCTTTGAAAAAAGACGCAC GACAGGAGGCGGCACCGAAACCGAGGAAAAAGCGTGCAGGTCGTAAAAAG AAAGATCCAGATGAACCTACTAAGTATGCGActtttctaaataaaaagaT TACTGCTGGTCATGTCGATTTAAACTGACATTTTAAGTACTTTTTGATAA TTTGGACTATTCTATATTCAACTGAAATTAATTTGTATTTTATAAAATGC GAATATTTAGACTTTGCCTCTGTTAGTCATCTCTCATTCCAATGTACCTA TTATGATTTGCTTCAAGATAACTGTTCCTCCATCAGTAAAAATAAGTTTA CTTACAATTTTTTCAGACCCATCTTAGCATACCAGTTATTCTTTCGTGAA GCACAGCAGAGGCTGAAAGAAGAGAACCCCATGTATAAGGTATCAGTTAA TTTGTGACTTAAAATGTTTTGTAATTTGGtatataattttcttaaaaaca ttttttatttagagGTCTGAAATTTTGAAAGCCCTTTTCGAAAAATAATC AACGCAATGAAttgtaaacatttatttttcggAGTGATGAATAAATTTTC TTCTAATATCAGTTAAATGCACGAATTAGGGTAATCTTTTTATGCATGCG ATTCAAAAAATCCATCTTTGGCCTCATTCTTTATGGTTTCAAGTGCAATT CTGGTGCAATTAGATCAGACGAGAGCTAATTACATTGAAAGCTCTTTAAT CCAACATACTTTGGTTTTGTGTAACCTGAATCAGCAGTTATATGATTTTG TCGTTTTTGCAGGAAAACTTTGGTGAACTTTCAAGAAAGATTGGTAAATT ATGGGAGGAACTGGACCCCGAAAAGAAAAAGGTATTACTTCCAATAAATG ATTTTATGTAATCTTACTACTTGAATATAGAAAGAATGTCTGTGTCAATA ATAATCTACGTTGGGTAAGAAAGGCTGTAATTTAGTGATGGATTTTCAAT TTGACAGCGGTTTTAtactcgttgaaaagatattcaagagTAGAGTATAA AAATGAaactattccaaaaaaaagatCAACTGAATAACTGCTATAAGTAC CATTATAAtgttatataatatttttccaCTCGTGAATACCatctcaattt ttttcagaaGATTGAGAACAAAGGGGGGAGCGCCAATTACTCATTCCCCG ACTTTTTGCGTTGGAATATGACCTAATTTTAGCAGTCGAACAAGTTTGAT TTAACGTGACCTTACTTATTCTCCTCGATGATATGCTGTcataaattttc aacaaaagtaATTCTTGATTCTTCGTCAAGAAACTCATGTAAACTTATTT TACCAGTCTTCTAACAAGCCGACCGCGCTGTTTAGGGTCAATAAGTGTAA GAgtggccgggtagctcagtcgttAGAGCATTcaccttacaatctaaggg tttTGGGTTCGATCCCTGCTCACCGCCAACTCAACGAATGAGTAACCTGA TCTAAGCGGTAAGTTACTGCGAGCTGAGAGTAGGTTTGGAGCCCCACacc agcattcgatctcccaggtctagtgCAAATAACAAAAAAGGGCATAAACC CCGTCtctcccggctccgccgacagccaccagatgaatatacttacttac ataagtgtatttcttcttttgttttgaaggtTCACCGACAGAATTATCAG AAAGAGAAAGCGGAATACGACATCAAACTTAAAGAGTACAAGGAGAAAAA AGCTCTGGTAAATTTGCTCTTCTCTTTCATTAAAGGTTTTCAATCCTGAA TCCTGATTctgaattttcatttgcttttgGTGCACTCTTATTCTCGGGTA CCTATTAAGCACCCctgttaattaatttttcgaaaattttccacccattC CATACATTTGTATTCCAACCCTTAGGTAGGGAATAGGGAGCAATTCAACC TTGAGAGTCCAGTTACTTTTTCATCAAACTTATTTGTTGTTGACTGATAG GCTCTACTGTTTTTTTCTTATCCATTATTGAACTATTTTTCGTTCCTCTG ATATTTTGTGATTGAAAGGACATAATATATCAATTAATGAGATGAACGTA AGCCTTGTGATGCTCTCGCGAGTTTTACGCAATGCATCCTTTTTAATGAT TTGTATTATGCAATTAAATTACTTAAAATCCTAACAATTAATCTTTAGGA AGAAGCACAGAACGAAGCACTTTCACCTTCCACTTCTGCTAATCAAAACA GTCGAGACGGTTTATCGACGGCCCCTGATGACGATGATGAAGACGCCCCG CTTAAGAAGACTAGTCCTAGCAAGAAGGGCGCCAAAAAGAAGACGCCTGC CACCAGCCGCCCGAAACTAACAGCAACCACAATCGCCACTTCAAGTACAC TTTCACCACCGTTACATAATTTCAACGAAGAATCGAACGACTCTGTTATC GATCAAGCAGCTGATGGAACAGAAGTTAAACGCAAACGAAAGTATATTAA AAAGACTAAAACCTCTGCGACTGACTCCCCCTCACCGCCGTCTACCGACA CTGAAGGGTCAGAGTCAGAGGAGGATGATGCGATATCTCGGATCAAAGAA CTAGCAGCTAAAGCTAAGAAAACGTtaaagaaaatcgaaaaacaaaCTTC TAAAGGTAAAGGGAAGGGAAAAGTTGTCAAAATGGAAGTCGAAACCGTCT CAACCAACATCCAATACGATCCAAGTCCGAAGAAAGTGGAAGCGAATGCA CAACCGGAAACCATGGAAACTGACCAACCAAAACACCCGGAAGCGTCCAC GCCAGTACAAGAAGAAATGTCTCCACCTCGAGCGACTGTTGAAACGCCCG CTTCAACGCCAACCGCCCCAGAAGTAAAAGGGATGACTGCCAAAAACTTG AAAGCAACGactaaagaaaaagtaaaagtaaaagagAAAGCATCGGATAA AGTGAACAATAATGATACTAATAAAGACTATAAAACTGACGATTCTTCAA TACCGCCCTTGTCGTCTCCACCGCCCAAAGCGTCTTTCAAAATACCGAAG AAAGCGCACGGTGAAAATGGACAGGTAATGCTTTTCATACGGATGTTTTG TTCCCAATTATTTCACATTGTAGACTCAattaatctatatattaatacgc ttaaacgtgtgtgtttacaacgttttgtaaaaagttttcgaaaatctaac aaagctctacaaagcctcctcttcatggcgttgaaccatcatctttttgc accttaagcagatttcctaccactagactaactttgagacctcaagatac tattttctattcatcaagtttggagcttgatgggttaaaatcaaccttct tcccaattttttttttgtcatttcaaAGAAtgcttattcagatgctcttt gaAACTTtatgtttacaatagcggctccctatcactttcaaaacttttta aagtctttcaaagtcaccctcgaatgtccaaccacgatggccagccacga tggctaagaacatctaaaatatacttttgctaagccatttatttaattgt ggtcaaaaattgcaatgcaatggttatcttttttctcctttatttcctaa aatcaaaattaaatcatCAATTGGCGGCTATCTTTCTTCAGTTAGAATTT TTAGATGTGTAGTGATTCAttggattgggacacgcagcgtgcgacgctgc gcatacggctagtttctatttatttcaatagGATTGGAACTTTGGTCAGA GGGtgcacacgttttttataagaacacgagtcTGAATTTGAGAATAGTCT TATTTGTACAAATCTTGCTAAAAATCAAGCATATGCTGAGCCTCAGTTCT TGAATTTCAAATCATAAATCTACAAAATTACAAGGTATACTGATGATAAA AAAGCATAGGTATTTATACTGgttttgttcttaatttgttcataggtttt gggctaaattgagccttgtgttcttataaaactgcTCTTTTAAGAAAAAC CGGTGCTGAGCCAAAATCTAAaggttcttttataaaaagatgTAACAGGT GAATTCAGAGTTCTACCGAAACAATAGCTGATTCATTTTAGTATGTCAGA TTAAAGTGGAACAGTTTTCTAAGTAGAAAATTCCTCATggtttttgtcga ctttttagTAATAtgtttcaaaagcttttttgaaCTGCCATGGGAACAGA GCATCAATGATTGCCTTGAAATTTGGAAATgaagtcaaaaattcttttga tcATCTCGATTGAAGTGCATATTTTTTCGAACATTTCCTTGTATTTGCCA TGGAATCTTAGATACTTAAGTTTGAATTTTGTGTTCTATAtaagaaacaa taaattttgttcGAGATCGTGATTTTCAGCTTtgattgttcttaaaatgt tcttaatatgatAACTCTACTCTCTTAACTCTTTACTCTCTGACTTAAAA GGGATTAAAATTAGTATTTTCTTATCCATTTCTGACATCTGAGGCTTCGT TTGTTCTTAGTTTCATCTAAGCTTTTTAAGttccatttttttataaaatt gttcttatgaaaagtATGTACAATcagttttcttgaattttctcGTCATT GTTTATCTTTGATTTCTCATAGGTTGCTCCTCAAGGACCTCGTTTATGTG TTCGTGAAAGTTGTCCAAACCCCATCAAAGTCACGCGCGAGCGAGGTGCT CAATATTGCAGTAACGATTGTTTGGTGCTCTACTGCAGGTAATATATTTT TCTTAACAATTATGACAACTCaattattttaaactttttgttatccTTCT GTGCATGGCCGAAGGAAAAACTCCAGAAATTCTATAATAAATTTTTACCC TGTTTTACTGTGCTTTGTCAAATATGTGACTAAATCAATACATGGCATCC TGATAAAAATGTATATCACGTCAAGTAGAGGTGCTATGTTGAGTACACGT GACAATAAAGACAGATAATGGGCTATTTTGCATATGAAtacccttttttt atttttagggaAGTGTTTGATGCTTGGGTGATTGACCGACAGAAAGAGGA AGCTCTCAAGACGTAACCACtattcgttcgtttgttcgttcgtttttTTA TCAgctaaagaaaaagaagaatttttatttacattatCAATTCATCTACC AATCCTAAATTCATAAGAGGAGTGAACTCGAATTTGCCAGGGCTTTATAT TTATGGCGTCAAAAATATATGTCTGACGCGAGCCTCTTGATATATTATGC ATTAACCCTCGTTAACTCGAACACAGTCCCCTTGTGGTGTTAGGGTTGAT AGGTGCATTAGCTCTAGCTTTGTTTATAGTTTCTTaataatcaatttttt gacgtttttaaaAGCTCTAAATGTAAAACTACTCTGTCTTTCCCTGAACt gatttttggaagaaaaaaacagCAATTCGCTTTGAAAGCGTTTAACTTTA GTTTTCTCTGTAAGGCACGAACTACGAAAATAATATAGATATAATGAATG AAATACGATAAGGTACAGAATGATTTGATGTAATAATGTATCTACGTAAT ATAAAGCTGCAGTTTTGCCCCGGTTTTGATTTCTCAATCAAAGTGTGTAC CGTATTAAATTATTAACTTGTATTAGCCCACTTCTGTGAAAGATTGAAAA GAGTTCAATTTAATCAAACTGAAAGACGCGAGTAGTTTTACTCCTATTTG ATATCgagctttctttttttttgaaacgagaaagtttttttttgtataaa agcaAAATTTATAGATTATGTAAAAAAGGTGTACAGAATTTATTCaacta tttttttagaaaaatatcaaatttgtcttttttcgggtatgaaaaaaatg gaaatatataaaaaagatatttataTTGAACAATCACGAAATCCAAAAAA TGCATCTAATTTTTCTGATCCAATTTAGATAGAACTGCTTGCTATGTCGC AACTcttgttttgaaagaaaaagtagaattttgaaTTGATAGCATTTCCT TTGTGGCAAATCGAACTGTAATGATACCTTCCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003128TCONS_00003128Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003128-proteinTCONS_00003128-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:789002..797984 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.73 10.79 2.95 1.55 36.44 28.23 17.42 20.69 8.27 12.53 10.54 7.03 7.96 7.93 7.53 8.77 12.37 11.55 5.76 6.73 11.04 11.77 17.09 17.43 14.48 16.37 8.17 6.57 19.3 21.18