XLOC_001727 (gene) - C. hemisphaerica

Overview
NameXLOC_001727
Unique NameXLOC_001727
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000025:567476..571101+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001727 ID=XLOC_001727|Name=XLOC_001727|organism=Clytia hemisphaerica|type=gene|length=3626bp|location=Sequence derived from alignment at sc0000025:567476..571101+ (Clytia hemisphaerica)
TCCCGAGACGACATCAAGTTGATTGATATATACAGTTTATACAGAGGGAA
GTTGAAGGGTCATTTTGAACTGAAAAACGAGGAGATAGAAGTGTGAGAAA
TTTGGCAGTGTTCAACGTACCATGTTTGAGTATTGGTTACGAGTGACCTC
AGCTTATCGATTATTTGTCAAAGATGCTTTACTTCATGTTCTGCATGATG
AAGATATCGGAGGATTTCCAAAAGATGAGGAACTAGTCTATGCTATATTG
CAAAAATTtcgagaagaagaagaaactaGGCTAAGTAATGTGATTACCAA
AACACAATGGGATACTATTTGTCACGTGTGCAATGCTGAATGCGAGGAGT
CGTGTCAACAACAAGGCGTGTGCCGAACAAAGACGTTAGACGTTCCTACT
ATTATAGCACTTATTATCGGTATGACGGAACTGGATCCTCCTAAAGGAAG
TCGAGGTTGGAGCCAGATGTTGCCGAAGCTAGGAGATGGGAGTCGAGGAG
CCGCTGTTTTGTTAGCTAAACAACTACACGCTAAAATGAAAGTAATGAGC
GTACGAGATATTAAAAACGAAGAACAGTTTGATGATTTATGGGATGAAAT
TGAGATTATTTTAAACGGCTTGAACTACAGGAATCTTCAGGTAttccaga
aaatgaaaacagGTCGTATTAGTAAATACTACAAAGTTGTTTTCCAAGTT
CTAGTCGATAAATACGAAAAAACTTGCaatgaaaaacagaagaaaatcTC
TCGGCTTGAATTTGAGACTTTGAAAGAAGGACTTGAGGCTTATTTAGAGT
CCATGGACCAATCATCCTTAGGAGAGTCCGCTTTTGGGGTCATATCCCAA
ATGGCCGAATATCAGAGCCAGATTGATGAACGACTGGAGGAGATAGAACA
GCAACAGATGCAAGAGAATCAGTCAGAATCGTTACCGGCAAATTTGAATG
AGGATAATGAGCAGTTATTAAGATGTGTCGTCGAGGGAATGAAATTacac
atctctgaaaatttagCCGACGAAAATAGTGagattctaattttttttaa
aggaaattatGATCAGAATCAAGATAATAAACAAGGTTTAAACAACCTTT
GCGGAAAAAATTCCCTCACATCTTTGCCAATTAATGCATTTGCGAAAAAt
gtggtcaaaagaaaaatacaataaaaaaacacGCCATAGCATCTACGTAC
ATGTGCCAAAATCCGAGCCAAAGTTGGAAAATACGTCCCTATAAGAGcct
attttcccaattttcagcaaaaaaattcaaatattggTCCAAATTACAAG
AATGACCTTTGAGAGACTTTAGAGAGTGTAAAACAGGGACCCTAGTGGCT
CGCACATACGAAACGCCATTTTGGCTTTGTACCCCCTTCACACGCATGGT
TAATTCTTTTTGATCAACAGACAGAGCTGTACGAATGGCATGTATATATT
GCTTAACATTCCATCTTTTCATTCATAGGTATCTTGCAACAATCGAAGGA
CCTGAAAGAAGCCAGCAAAGTGCGTTTCCAGATGGCTGTTGACACATGTG
GAAATGGTAGAATCAAAGCCACCACTATGAAACCTATCCTAACTATCGTC
ACTGAAGATTATTATGCCAAAACGTACAATGAAACGTCTAGTTTCCTACC
CAGTGTGCGGGATCTGGTGGCTCGACAAAAGAAGTTTATCCCGTTCGAAA
ATAAGATCATGACGTTAGAGAATCTGATTAAAACACCTTCAGAATGCTTG
ATTTTAATTGGACAAGAAGGTATTGGTAAATCGACCCTCATTGATACTAT
TTTATATCAATGGGGTTGTGATCAGCTCTGGGGAAGCTCGTCGAAGTTCG
agtttaattttgtatttgttTTACATTTCCGACAGTTGACTCGCTTTCAG
AACCAACCTGGCATCACAGCTGAGGAGATTCTAGAACATTTCTATCCCAA
TTTACCATTAGACTTGCTAATTACGATTCAATCAGAGATTAATTGTCTAT
TGGTTTTGGATGGATTCGATCAATATTCTTCTTTGGATGAGTTTAAAAAG
TCCAGTGAAGAACCTTCGTCATTCGTCAAAGCTGTTTTCGATTTACTGAA
TCCAAGAAGTGAGAAAATCCCTTTCACAAGGATCATCACAACACACCCAG
ATTATCTTCAAACGTTAGCTTCAGTCTCCTTAATACCAGCACAAGAAAAG
AATGATAAAATTTCCTTAAAAGTTGTGGAGTTGGGTGGATTGAGCTTCAA
ATCGGTTAACAATTATCTAACAGATTATTTAAAAGATGACACACCTCCTA
AAGAGGTGATCGATGCAGTAAAATCTAATAAGGTTTTGTATGACTTAATG
ATTGTACCATCAATCTGTCAAGGAATGTGTGAACTCATTGATAATAAACT
GTTAACGGATGAAAACCTTCCCCAAGATAATACGACCATGTTCACACTAA
TGTTCATATGCCGCCTCTGGAAACGCCAATTCAAAGAAGCGTCAACCCTG
AACGGGATGTTTATAAAACCATCATTCAAAGAGTCTTGCATTAACTTAGC
AACGGCTGTGTTTCACTTGGAAACTAGTAAGATGGTAGATTTTCAGCTGG
AAGACTTGCCAGTGGAATCGAACATTGAGACTTTATTGGAGGCTGGTTTT
ATCATTAAACTAAACAATAACATTGATAAACCTTATTCATTCAGTTATCA
ATTCTTACATcgtatttttaaagatttcctaTTGGCTTTATACGTTTTTT
CGAATGGATTCACGAAAGAATCTAAAACTATTATGAATAAGAACATACTG
GTTATTCTTGGAGCATTTGCCGGTGCTTCAGTACCAAATTCAACTTCTGA
CCCACACATGCAGAAATTCTGTCGACTTTTTAACAGTAATTTAACACTGG
ATGACATCTTACAATCATGTAATTGCCACGATTCAGAGAAAATTCAAACA
TTGCGCGGATTTTTGAAATCGATTAGAGACGATGATCATCATAAAAGCAA
ACAGTTAGGacaactgctgactcagcacaataaaaacaaaacagaatcaC
CGAAACGGAGTCCAAGAGATGAAAAGTATGACGTCACACCTGTAATAAAT
GCTTTGATTTTATATGAATTCGgatttcaaaactttaaagaAGTGACTCT
ATCGAAACCGGTGGCTATCGTGGGTTCCGCTCTTAAACCTTACATGGATA
ATGAACTTCGAGATATGTTGAAAGAATACATCAAACAGAAGAAAATTGTT
ATAAAGGGCAATAAGTAAATATCGAATAATTTATCTTGTCGGTCCTATTC
TAGCAAGATTCTTCGTTttattttcgttcgtcgtcgtgattttaccgatt
tacttaacttcGCTAATGTAAGCAAAATAACGCAACTAACAACCAGTTTT
CAAAAACCCTGTGAAAGGTAtcaattttggtaaaaaaaaggTTGATGTTG
ATGTTTATGGACTTAAACCTTAACTATAAATTTGATTTGGAATTCTAAAT
TACTAAGAAAACATGAACGTTAAACACGGCGAATGTCAATTTCTCACTTG
GAAACCATTTTGTTGAGTTAGTTACACAAaaacaaccccttctcacagcc
ccggtaggatttaaataacggaccaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003107TCONS_00003107Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003107-proteinTCONS_00003107-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:567476..571101 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.25	0.34	0.58	0.66	0.03	0.04	0.34	0.27	0.35	0.17	0.24	0.33	1.1	0.78	0.35	0.55	0.22	0.15	1.07	1.68	0.25	0.12	0.89	1.11	1.61	2.65	0.23	0.05	0.37	0.38