XLOC_001711 (gene) - C. hemisphaerica

Overview
NameXLOC_001711
Unique NameXLOC_001711
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000025:155527..164093+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001711 ID=XLOC_001711|Name=XLOC_001711|organism=Clytia hemisphaerica|type=gene|length=8567bp|location=Sequence derived from alignment at sc0000025:155527..164093+ (Clytia hemisphaerica)
TAGACAGTATGTAAACTAAGAAGTATACCAGAATAATCGAAAATAAACTC ACTAAAAAGACGGTCAACCGAGATGCATACTTGTTCCTCAGCAGCAATCA TCATAGTCGCCTTCGTTGCTGGGTTTGTGACATCACAGTCCCTCTTGATC CCGAAACAGGTCGACCGTATGAAGGCTGGAGATGTGTTTCAGCCCAACCC TGGAAAGAAGTGTACAGATATACGGAACGCCGAGAATCACTCATCAATCA ATACGAACGTATGCAAATGTAAGAGTGGAACAAACACattgtattttgat tttaataatgAAGATTCTTGTTATGCAAGCAGCGACACGGTTGGTAagat attttttagtatttggTTACAACCCTCTCCCCCGTCGCGAAAAGCTAGAG ATTTGCCCGAGCAATTCCTGGTCTCCAAAAATGAGAAATTaggagaaatt aattttttgacaaaGTATCCTTCAAATTAAGTGGTTAAGTCATTCAAATT GGTCCAGAATTACGACCAAGTTGACATTTTTGACCCTGATAAGGCAAGCA AAGGTGACGCAAAAAGTGCATACGCGAAGATCTGcaaaaagttaattaaa aaaattcatcaggTTGAAAAATTCAACAAGAACCTTTCTATATTTTCATT GTCCAACCCGATATTCAATCGTTTTTCGTTATCAGGTCAAACAACCATGT TTTTCCAAGGAACGAACGGTCAAGTCGCTTTAGTTGGTTGGGATAATACA AACAAACAATGGAATTTCGTACAAAGACCTATTATACATGAAAATGGAAC TTTGTTCGATTTCCAATCTTGCTCACAGAGAATTGAGCTTGAACTTTGGG AATATACTAATTACAATTTCAGTTACACTAAGTTCAACGACGATATTTTC AAACCAGCAGTACCGGACAGGAAATTTACTTTCGAAGTAAGTAAAACTTT TCCAtcgttgatttttttttttttttggtgcgATCGCGtaatcaacaata tttttttcgcAGGATGGTGTGCTTaaggaatttttttgtgaaaaacctTG ACCATTCTTGACCATTTTCGAGAACAAAGAGCGCAAATCAAAGATATAAA ATAATGTACAACTTGAATATTCTAGGCTTGTGAGGCCTTCTTCTTCTAGG CCTATTTTTCTCTGAATGTTTTTTAAGGAGCGGTCATTCTGATAAAAagt gaactaattttttttcgtaccaaataaatttttgtatttttcggTTATTC CACAAAGATTATATTCAATATCAGTAAAGGCCTCTATATAAATGAACAAA ATTAGAGCGTCTTTGTAAacgaaaaattcttttaaacaaaattcaaataG AGTTAAATATATATGTACCCCTCTTTCCAGGGTTGGACTGAAACAGTGAA TGACTCAGTGAAAGTGATATTTGAAACGAAACCCTCCTGTTTCTAACCCG AACAaattttatggtcccttcattTAACactgccttataaaccttactta atctgaacaaattttgtGCTCCTGTGCGGGTTTTAGTTATGGATATCCAC TGTATATTAGTGCTGATAAGACAAGAGTGGGTTGGTTTCACCAAAGACAG TGCTCTATGTGGAGGAGCAATATAATAAGAAGAAGATCcactgtatatat ttttaattcttaaaagttttcagccagtggacaaaacaaaaaagataaaa gtgTACTTCAAGGAAGGCTGTTCGATATATCATGGAGTTGTGATAAGTCT ggagagaaatattttacgagtgtCAAATTCGCTGGAAGAGAAGAGTGTAa gtattgattgattgattgattgattgattttggccatttttgacTCCGAA ATACCGATAAATTTCCTTTCCTCAAACATCGAAACAAACGACAAAAAAGG ACTACATCATACTGTTAAACCAGTTAAGTAAAGGTGGATGGATACTCAAC GTGCTCTTTCGCAGAGATTCGAAATACTTGGGTCTGTCAAAAAACGCccc tatttttcaatttttaacgtACAAATTTCTATCGAACAAAGACAAATTAA ATTTTAAGggaagatttaaaatttaattcaaattaTACATTTGTATGTTT ATTTGAAATGACTTTATGACAACTTCGCTGAGTTAcgtcaatttttcact ttttggaaataaaatgtgcaatactcacaaaaaaaatcaagcagCTCAAC TGAATAGAAAAATGTACGTCAAAGATTGTAAAATAGGGACGTTTTTTTTT ACACACCCGGTAGATAAAAGTGGAGCGTTTGCAAATAGATTCTTAAAGGA TATAAATTTAAATACCAAAATATTTACTTTGCAGATTATTTTGGAAAAAC TCCTCCATCTCCAACCGCCCCTCCTACACCAGAGACAACAGAAGAAGAAA CAACTCAGGTATATATATTAGTTAAGATATATTAGCCTTTTTGTAAGAGA TAACACCAGAATTCCGGTCATCGCACTTTCTTCCAAACAAAAGCTTTGGC GAAAGCTTTGTGCAACTGCAGGGGTTTTGGGCGATCCATGAGCAATCCGT TCAGATTTATTTTTCGAGTCTAACTCTAGACCTGAAGGTACATCACGTTT ATTGTACAATTTgtgttatcattttttttactGTGTTTCAGTTTCAGCCG CAATTTATTGATTTTATATGTAAAAGATAAAGAGCATGTATTTCTGTGAA CAGCTAAAAGTGTGCGTCCTCGTTAACATTGAATCGGACCCCCACAGACT TTGTCAGCAGCACCAAAAGTAAATTAAATAGATTCTCTATCCAAAGTTGT GCGGTGAAATGACTGGAACGATTTATAATAACCCACAGTTTTCACCCGCG CAAAATCAACgacggtaaaagtgcttgtttgccgtcgtcctcagtcattC AGGATATGAGCAGATCAGAAGTTAATTGTCTCCGTCGCTAAAAAAAACAC ACACAACTACATTAACTCGCTTAAGTCACCTACCACCAACTATTCGCCCC TATTTGCGAGGTTGTGTAACGCCTAAGTTCCCCGAAAGTCAGCAGATAAG CAACACACAAACATAATCAATAACTtgcagaaattttaaattttaaactt cAAAGTGTTTTTCTATAAACAGGCTCCACCCGATTATGTTATTGTTGAAC GCGGTCTGGACAGAGACAGATATTCTTTGAACGGGCCCGATGAATATCAA AACTGTGATTGGGGCAATCCAATGTATGCATTGACACCTGACATCGGTGA TTTGGGATGTACCAATCTCACAGCCATCTCAGATGCGTATCAAGGTAAGA TTCATAAAACCAATTTAATTGATACACTACAGTACCCCTCGAATTTAGTT CTGCTTTGTTTATTCCAGAAGCAAACTCAATGTTTTTGGTATATCTGCAA TCAggttcaaaatatattgagaatttggGGGTATTTTAGCGTTTTACGTT TTACGGAATTTTTAGGCTCCCTCTAAAAATGGGAATCAATCGTTAACCCC AGTAATGTAGGTAAGGTATCCAGCtaacacaacattgtttcaaaatgAAC ATATTAAAGCTTGATATTATTCGAAGTAGAAAAAATGTTATGATATTTAT CATGAACCGCATGCTAGCTTTTCTTCTTTGAATTTAGCTGGTTACAATAC TATGTTGAAATACGTTGGTCCTCACGAGGATGGAGATAAAACATCCACCT ACACCATCTTCATTAAGAATAACGAATGGACAGAACCCAAGCAATATGAT TGGAGATTGCGATTTCTACAGAATAGTGAATTGTTGATCTCATCAGATGC TTGCAGCAATGGAGAACTGCGTATTAAAGAGATACAAGTTTTGACTTTTG ATGGTTGGAAAGTGTGGACTAAACTAGTACAGAATTACTTTACTTTGGTA AAACATGATGATAATGAGGTTGCTGGAGGAGAAACgacttcttctttttc cttaaCTGTAAGTAGAAAAGTTTCGCCGATTTTCGCTGAGGTCTCTCCAA TGAGGGAGGGTACACCAACAACGGTGGATAGTTTCAAAATAGTACGTAGA AATTTTCCAGAGATTGATTGACAGTGGAGTCAATTTAAttcaaacctcta taactcgaatgacTCAAACAAGTTATCGCATCCCTACAGTTAAAAATGTC TTACAAACCTTAACCCATAACTTTCGTTACAAATTTGCGCAACATTACGT GTTCGTGAAGACTCTCCTACATATAACGAGTTATCTCATTTCATTTTCAG TTCAACTATTTCGAGTATAAATATTACAGAGCCTTTTTGGGTCATTTATT CGACATCCAAATGGATTGTTTTGGTTCAGGTGTTTATCATTTGTTCGTCA AGTTCGAAGGTAGTAGAACATGTAAGTCGCATTTTGGCTTTGATTTGTTT TTCTTATCATAAAGTCCCGGGGAGGGGGTGGTACTAGGGTTGAGAGCTGA CGGGGGGGGGTACCGCCCGACTTTCGACCCTTGGACCCTTACTGGGACTA ACAAAGAGAAAACAAAGAAAATGTTTGTGAATTTCACGACCCTTATTAGG ACAAATTTGACCAATTTTGATCAAATTTCGATCTTTCCAGGGGTgtaaaa agttgaaatttttctatttttccgacccttagtgggactgaaatttgatt ttctgatttttctgacccgtagcgggactttggaaatccaaaaaaggtac ccttaagagCGGCACacaccgtaccctccatttgcctaagtaCCCCCGGG CATAAAGTCAATTAAAGCCGAATAGGGGGACGGACCAACACCGTTTTGAT ACGGAATGTTTCTATAGATAACACCCCTGTNAATTAAAGCCGAATAGGGG GACGGACCAACACCGTTTTGATACGGAATGTTTCTATAGATAACACCCCT GTCACCTCAGAAGCCCAGTGGGGTTACTTTAAGTTACAGATAGTGATTTT CCAAGGGTCCAATGATTTTCATAATTGGGCTAACAGTTCAGAAAATTTCC CCACCAGGGCCAATTTTTCGACTAATATTTCCAGCGAGGAGCCTGTAATA ACAGGGGTAAACATCATATTCAATATCGATATTCAGATAATCCAACTATC TTATCTACATTTAACCCTTAAAGTGCCAATGACTAGatatgggctatata ggagggcgaagccttcctgtaatgcccagtttgagttagaaatcgtcatt tttggtctaactcgtaggaattggattgggtttcatggtcaagcaaaaaa gtgagtttttccagcgagattttaagccaaaaaatcaaaaaaatgcaaaa atttgacaaaaatcccattttttaAGATTGTGACcgtttttttgaccatt tttggtcaacgagtgatcccaagaacctccaaattggccctgctttactt gattctatCCTCTAGTGAATTAATTAATTaactgggcacctttctatcat tcagtctTTTAATAACGATATCATCAATCTAAAATTAAGCCGGACATAAT AAGGGATTCTAATTTACGAACAGCCTTCTATCAATATTTTGTCCCCTAAA AACGGGCCGAGTCGATAGCACTTCGggaaaaataaacaataataataata atcacaTTTTCATTTGTTCAACAAACTCTAACAAACTCATGGCTATCAAT CATTTTTACCTCTTTAAACCTTTAGATACGCAAGGAGAGGACAACTTTGA ACCACCAACTCACAAACAACCCATACAAACTACACAATCACCAACTCCGC CCATTAAAAATCCACCATCAGAAGCATCCTCAACTTCTGATGATAATGTT CCTGTCATAGTTGGAGCTGTTGTCGGAGGAATTGCATTTATTGTACTATT GATAGCTTTATACTGTTACTGCAAGGCGAGAAGGTATAAAATTTAAGGTA TTTAAGGTATAAAATTTGATCAAGCTCAAACCCTTcgattttgaagtatt ttgataGCACTCGCGATTGTATTACCCaacaagtaaaatcaaaaagtggt gtaAGTGGTGCTCTGAGTATAAGATTGTTTGATTTGTAAAGTAATTAAGT AGAGGGGGCTTATTTATACGGATTCTCGCAATCCTTCTATGCCACTTTTC TAGAAGGGGGTCAGAATCAGATCTGATTAGTAATCCAATATCATTAACAT TATGGAATAAAGCTGTTCGAATTGTAAGTGTTCTAACATAGATTGGAAgg gtaaattttaaaattaatggTCTAATAAGTGGTCCAAAATGGTCTAACAT AGCCAGGAAGTCTGTaaacccctccaaaatcaaaatattcgattaaatta agtcgatggcccaaaatcgactttctcgcccagAAAGAATAACTAGAATT CTCAACATATATTAAAAAGGCAAAGATTATAGTTGCAAGCCCTCTCTCAA ATATTCTCAGAATTATCTACAAAGAACAGAAGATATTCATCTCAAGAGAT TGTTTTCATGGATCCTGTCCAAGAAGGATTGCATAAACTACTAAATTGCG AATATCGCCGGGTGTAAAATATTGCTCATTATTTTCGTTTAGATACAAAG GAAGGCATAACGGGACAACACAGGTCAGTTTAATACTAAAATCGTGCTGT GTTATCAAAAAGCCAAGAATAAAAGTCAGAAACTACCAAAACTGAaaccc aacctcgtccccgtgtatcctaGGCTTTATTTACGATTGACCGccgagaa taccctggtgttgagGGGGGAGggacttctcaaaacaatatgtcataaaa aatctgacgttacaaaactacactgcaatgcaatggtttcaaatccagaa acaaatgaaatctgacgttttgtttttagattACATAATTTTTCGCGTTC GAAAAAcagacaatgccagggtatAAGTAAGCATCAAAAtactgataata cgcaggggaACGAGGTTGACTGAAACCAATATTAGTTTATTTAAAGAGAC GTCAAAGTGAAATCCATAGTGTAGTCTATAACTAGATATAAAAGCGGCAA AGGGAACCAATTAACTTGTTAATTGTCATTACTGTtgtcactttttcaaa ttttcagctcaaatttttttttaaatcttccaGCTAAAAACTAAAGAAAG TGGTGATGCCGTTTGGTCAAAGACCGCCCAAAAATCACTCAATATACCTG AAGGACCTGAAGGTATGTaatgctttctttttcattttctactctcttca ggggcacAAGAAGCGTGACAGTACCTCCTTTTGATGTCTATAATTTAACA TCATTAGTAAAAATAATCCCCCTTTTATCCCCTCCTCGTTTTTCCCACGC TGGCTAAAAAAACTCTTCGTCCCcacttaagaaaaaaaaatcaaaattga cgaATTTCGATGTGCCTATCATTTTCAAAGGGTACATTTCAAATTAACGG GATAATGAAAAggatttttttcaagtaaaatctCTCTAATATCTCTTTAA TATTGCTGGTCTAAAATAAGAAACGGAACATATGATTTCAGCAAATcagc ttttttaatttttaattaacaTTTTAAGAGGTGTTCCTCGATACTTAGAT TGAAAGTTCTCCATTCCCCATCCTCGGTTGCTCCCCATCCTAGCCCCGAA CAAATTTTTCCCTCCCATACCTCCAGTTGGCCTCAAAACCTATTCCTCCC TAATCCAGAGGGGCACTATGGGTCTAGTCTATCAATACGAAACATTTCTT ATAAATTTTAgatgaaagcaaaaaagaggcaGCAGAAATTCTTGAACTGG CTAAGGAAATCATCCATGAAAGACACAGTGCAAAAGAAAGACCCGACGTC ATTCCACGATATATAATGGGCCGACCAGCTCCAAACCCAACAACTTCAGC GTACCAAGACCCTAGACCTAGCATCGGCCCCTTAGCGGCGAAGACCGACC CCTCAAAGTCGGGTCCTACCTCACCAGCATCAAATTTGTATACCGATTTA GCAAACGTACGACCAGGAGACTCCGCTTACGAGAGTTTACGACAAGATGC CGTAATACAGGACGATGAAAAACCACAAGAATCTTATGTGGATATGAATG GAATAGGTGGAGAAGAAGCTTATTTAGATTTGGAGCAAGCAAGAGAAGAC TTTGAGAAAGaaatacaacaacaacaagagggAAATAATTATGATAATCC TGATTACAAAgaacttcaaaaaattgaacCTGACAACGAATGTTGAGTTG TGTTTAGCAATGTGAATTATTTCGTTTAGCCCAAGCTGGGAAGATGATAT TCGCATTTGACGAATCAACAAATGAGACACTAGCTAATATGATAAAAACG ATATAAATAGACTTTAGGAATTGTAGGAAGGCGCCCCAGAGATTGGTGAC TCAAGGGTTCTTTGACCGATTTGTCTCTACCGTGCACATACATGTTCAAC ACACCAGTGTATTCACCAAATAACCCATTCGAAGAGGTATTGGCCGACGA TGATGGCTTATttactgtaaatattttttcttgtaacaGTTTAAAGATTT TGACCTAGCGATTGAAAATCTTATTTGAAGTTCAAGGATAGTGCTCTAAT TGTCATTCCGTAGTTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003085TCONS_00003085Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003085-proteinTCONS_00003085-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:155527..164093 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.01 0.01 0 0.02 0.04 0 0.04 0.07 0.01 0.02 0 0.04 14.67 13.15 0.03 0.05 8.87 10.33 31.11 31.64 11.61 10.6 1.46 2.05 3.38 4.02 0.04 0.02 0.02 0