XLOC_001709 (gene) - C. hemisphaerica

Overview
NameXLOC_001709
Unique NameXLOC_001709
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000025:133088..140688+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001709 ID=XLOC_001709|Name=XLOC_001709|organism=Clytia hemisphaerica|type=gene|length=7601bp|location=Sequence derived from alignment at sc0000025:133088..140688+ (Clytia hemisphaerica)
ttcaggttggattttccattggattttatcttttttccaactaagaaaac ttgaaatttccaaccttggaaatcgaaaattttttcctgtgataatGGAC CCTTTTTCAATAAGAAGCACGAATCCGTTGGTGGATCCCATAACAGCTTA AGATGGTGCATGTTTCATGAACCTTCGGAgagtttctttgaaaattatcC ACCTGTCACAATACTTCGTCAAGTTCAACTTAAGGACCAAGCAAATCCCA TAATTGAATAAAGCCTATCCTTTAAGGTCCGGAATTGAAGGGGGTCCAAG TAAAAGTCAGGGGGTCCGAAGTTTCCTCAAAATATAATGAACGGGGGAGA TTAATtgccgggggttggaaattgtacctctaagaaaacaagaaagaaaa aggaagaaagaaatgccctccgatgcatcggaatgggtcctacccacgac gGAGtgggaatcacagcgcaagcaaaCATCATATACTAAAACCACGCTAT ATAGAGCCATTCAGATTTTTATAGTAAATaaatatcttcaaaataaataa acgagGGGTCCTCGTAGGAACTGGAAGGTCCAAAaggttttcgaaaatta ataaatgAGGGGAGACGTTTGTTCGGGACTTTAGAGTATTTCCATAAATG TTACATGCAACTTTTAGAATAGCTATAAAATGCATAACCTCATAATAATA TTACTCACAATTCTGGCTTGCCAACATAACTGTTGGGGTGGCACAACAAA CATGTTTGAAGTCACAAGAGGTTTAGAAGATGAGTTTCAATTTTTGGAGA ACCAAGGACTTGAATGTGACAAACCAATCACTGCAACTGGTGGTACGAAA ACGTGTAGCTGTTCTGCCGATCATAGCAAGACAATGGTTTTCGAAGATGA GAAGAGAGCTATGTGTAAAGAAAGCCGTCAAATTTTGGACGAATTTAAAC AAAACATCATAGATGGAGGTATATACATATGTTTTTTAATAAGTATTAGT GCTTTTGGTGAGAATCCACTTttcatctgaaaattcaaaacatgaaaatt tttgCTTGATCATAAAATGTCAGTTTTACTCAAATAAGCACCTCGACGCT CTTAAGGGTGATTGATGCTAAATTATTGGTTAATGTCATTATAATGTGTA ATCTCTTCTTTTAATTTGTAGACCATGGATCTGACCCTGGACCTGATCCT CACGAGTTGAGTATTGAGAAGAATAAAGAGATCGGTCTGATGAAATGGGA CGAAGGCGTAGGGTGGGTTGGAACGAACGCCCTATACATCGCGGGCGGAG ATCGAGTTACGACCGAAAAAGAATGTAAAGATCCTAAGATAACTACTGTG AGGTAAGACAAGCCCAGTGTTTTTCCTTAGATGAAATCTAGACTTAAATT TGAGGATATCTGAAGATTTCAATTACCTCCCTACCTACTAATTTTTCCCT CAAATTATTCTCCCTCTCCAAGCCCGAAGAAGGTCGTTTGATAAAACTTA ACAGATTCCCATTCCCACAGACTGGCACAACAATAACAGAAGGCGTTTAC GGTGACCTGGACCAAGAGAGCTACACTAGTCTAAAGTTCAAAATTCTGTT GTTTTCCTCTAACAAAAAAAGAGGACTTTTTTTCACGATTAATTCAATAT CAGAACCTCCAGACTACCCCTTTTAACGTAATTTTTTCAACAGCTGTAAC AATCTGAAATGGACAACTTGCGATTCAGTGGTACCAACAGATTTCTTACT CACAAATCGGAAAGATTCATCTGGTGTAACTCACTTCTCCTTCGAGGTAA AGATCATTCACACATCATTCTATTCACACATGATCCCAATACAGTATATA CACCCCTGCAATGGTTATtgatattatcatttttaaaatagttctaatTA TTCACAAGTCACACAAAGGCCAAATAGTTACATATTTTTAAGTCATTGCA GGAGAGCATACAgttgacgttctactattcgatacgctcctttattcgat gaaaatccaatccaATAATTTCAATCCTTGagaatcgaattagagagtgt caactgtatcaTGAATCGTGAGtgacaatttttggaaaatgagTAAACTG TTTGTATAGTGACTAAAATCTAAACAATCCAAACTTCAACTTCAACGCAG TCAATTTATGCGCTGTAGTGACACAATTCTTTGTTTAAGTTTTCCcccaa tttttctttcaaaagtcaTTGATTGATTCTTGCTCCAataaggaaaaaag aaattattaaatTTTGGTGAACTTTACCGCAGAGTCCCATCCTCCTAATC TATCCATTTTTCATTAGGTTGCAATATCAAatatcagcaaaaaatatcaa gGTCGTTTAATAGCTCTTCANagtcccccccccccccggggattcTTGCT CCAataaggaaaaaagaaattattaaatTTTGGTGAACTTTACCGCAGAG TTCCATCCTCCTAATCTATCCATTTTTCATTAGGTTGCAATCTCAAATAT CAGCAAAACATATCAAGGTCGTTTAATAGCTCTCCAAATGTCATGTGGAG TTGAAAAAGCATTCATGATCTTCAAGTTTCAAGGAAAAAGAGATTGTAAG AATTcagtgtttttatttaattaatttcaaatgaaaagaatttattttag TAAAGTCTCATTCATCTCAAACTAAAGTCGGCTTATAGTATCTTGGTTAT GCTGTCTCTATAACTCTTCAATCGATATTATAGTGTTTATGATTGGAGAT TTCGAGATTCTCGATAATGCTTTTATCTTCAAATCATAGATGTTACACCA ATTTCTGCGTCATTGCCAACTCCACCACCGGGTGACGGTTCCACACCTCC ACGTCCACCGCTAACACCTCCAAATGGCTCAACTCCACCGCATCCACCAA AAACTCCTGGCCCAATGACCACCACCACAACGACCACCACAACCACAACC ACTGAAGGTGACGGAGACGACGAAGATGCCGTATGTGAATATTTGCAAGT CACTAAACATCCCTTTATTTGTAGCTCTTTCGCCATATCTTTCATTGAAT TACGGTCTATTCTCTCTAACTCCAACGTTATGAAAAGCTCCCCATAATCT GAATCTTGGTCAAAGACAAGATCGAATTAAATAAGGCTAATTTTATACAA CATATTGAATCAAAAGACATGATCCACCTTGGCTATAAGCGCTCGATCTG ACAAAGGATAAAGTTCAACCGACTAGACAGAATATTCAATAtcatttgca atatttttttaggctCTAAAAAACTCTTCCTNGAATATTCATAAtcattt gcaatattttttaagGCTCTAAAAAACTCTTCCTTTTATTCGGGCTTTAT TCCGAGCCTTCATCCAGTGTATCATATTCTTATAGATTTTGGAAGTGATA AGAGGGAAAAACGACGAGTATTCTTGTCCATCAAGAAGCTCAAACTGTCA ATGCATTGCTCCAAGGCCAACATATATGATCAACAGAAATGGTACAAACG GATGTTTTGGCTCCACAGACACCATCGAAGAGAATATAGCAGGTATGTAA AAATGACTTCAATTGTGTCAATTATGATGGCAATTTTATTTAAAGGTTTC AAGGCCATTGTACATGATAAATTTAATTGCAATTCATGGTTGAATGAAAC AGAGATATGTGATTGAAAGAGTTCCTATCAACAATTCACGTGATCTCGAA ATTATCTTCTACAGTCCATTCTCCAACCTACCTACGAAACTCATGCAATT AGAACTGCGAAATGATGATTGGACGTCTCCGTCTTGCGTTGGTATCTTAG TGTCgttacagacccactgggaccccttcccactggaaaaactgGCAAAA Atgtcgtccccggtggaaaattatcctccaatttttgtctccactcagaa taatcaaataaaccaatcctcactgcaaaatataatGCTGTTTTCCCATC CCCAATGAATTTTCTGAcatgaaatcaaaagaaataaaatcccaagccat aaaagtatgggaatatcaatccccatcgagttttggtcgttatttttacc cccactggctgaaaaaaccctaccgggtctgcgagaagggggtgtcttag tgattttgcatttttgtttttctaggaGGCGCTCCATACATCCTCAGTAG TAACTCCTACACTCTCAATATTGTATTTATGGTGACTTGGAATGATGGCA TCTCAAAATGGCGGAATCCTTTATCAGCACAAATTTTTGACATAGATAAA GACCTTATTACAGAGAGTATATGTAAAATTGGAAAGGTTTTCTCTGTGGA AGTTTACAACTATGACAAATGGCAATCCTGGAGcacaatttatttcaaaa acgaAGCTTCGAAAAACAATGGTGGTGGACAAACTATAATAGTAGCTGTA AGCAAAATGATTAATTAAAAGGTTTGGTTCTAAGGTCACATGCATTCTCC TTGATTAGCTGTCCAAACTCTCTAAGAAAAATGAGTTCATGATATGCCGC TGCCAACAGTCCCGAGAACCAGTCTCTCGCATAGTGCCTTGATAcgttaa aattggaaaaaattcatACCCAGGAGAGTTTAATTAATTAAGAATTAATA ATCTTTGCAAATATAGTACTCTTAAGATTTTGAGGCATAATTctaaaatg tctttttttctttatttatagaAAGACTACACGGGGAACCAGGATGATTT TGAAGGTCACTTGTTTCGGATCGGTTTCAAATGTGACAATTTGGCCAATA ATGAGATAATGAATCTTTTCATCAAATTCCAAGGTGAAAGAAAATGTAAG TGACATTGATTCCTATTGATCCGCCATAcacccaaaaataacgccaatgt TGACAGATTTAGATTATTGAACCCCTCTTGTTTGTTAAAGGGGTTTCTAT CCAAGTCTCTTCCATATTATTTGGGATCTTATATCATTAGGGTCTATTGT TTGTATTCACCTGTAAATTCGGTATTTTATACAGCAGACCTTCTACAATC TCTTAATCCATTTCAGATTTCGCTGGCAAAGATTTTACTGAACCAGTAGC TATTGCGGTATGTCTTCcaaattcattttatttcatcggttttaaaagtt tagaaaatctaGTGTTAGTAAGGAGCTAGTGCGTCATGCTCAAACTCGTA ACCAGTCCCTTAGTTTTcttatttatgattttgataGTACTTGCAAAAGT TTTACATCACTCCCTTCAATTAGATAAAAAAGCGGTGAAAGTGGCTGGTG GGTACACGATTGCGTTTCGTCTTTGATAATTAAATTCAAATCATAAACAT AAAACCGCCCATTGGGCACATTCACGTAAAATCCTTTCTTTGTAACAGGT TACACCAGCCGAAGCTCAAGTCGCAATCATTGTTGGATGCACGATGGCAG GCGTTGGCTTCATATGTATTTTGGTTGCATTGTTCATGCTATTCCGATGG AGGAAAAGGTACCAAATAATCTCACTAANNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNgctcaaattttcaaaatttcccccctcgggccaaaccatggt tggcccttgcggtgtcactaaacttcagccccctcaatatgaaaatgctt cctacggcactgcacTATCTCTCTTCCTCGTGTGATACTATATTTTTGAA TTGATTCCTATTTTCTGGTGCGCATATAAAACAGGGATTCAATTTTAGTC TAACAAGGTCGGGTAAGGGCAATTTTCTAGAATCGGTCAATACACTGGCT TCAGATGCAAGGGttgatgtaaaatacaaaagtaaaaaataatctCGTTC TACTATGTTTTAATCCATAGGAGAAATGGAGGAAAATTGAAAGGCCATAA AGAACTGGAAGGCAACGAATCATTAACTGAAACCAAGGTAAAGTGTTATT TTAATAACCATTGGTTGGttaatcttttaaaatttaagactttggtataa aatttgccaagtCGGCTAGTCGAGCCTATATTACAACCCTCAATCCTCCT GGTATTGATAGTTTACTCTTTGTTGTTCATTCCAGCTCCTCCTTACAATA AACTTAAGTTCCTCTCAATTTAGACCCACAACAAAAATACTCGCGATCTT AATCAATGTTTTAGTAacatttgtttgttgttttgttacttgtatCACAT CTTTGTTGATAAATTCTCAAACTGCCCGTAAGATTTTACACAAATTAAAT TAAGTGGCTAATCACCAtaatttaattctttttttccagTTGGATTCAGT TATCAAAGGAGATGAAAAAAGTAAGTCTAGCCAAGCAGTGGTTACTGTTT TTAAGAGAGTGCACGCTTGAATGTGGACTCGACTAACTCGATAGCTGAGT CGACGAAtgattatttttcacttttatacTCGTTCTGAAAAGCTCATTTC CAGAAACTCGACACTTTTGAGGCctttgaaaatttaacattCAAGGAAAA AGTTACCTGTCTTTCAGGGCCATTAATAACAAAAGTGTGATGTTAAATCT GTTCCCCTGCCAGAAGAGTAATCTTTGATGAAGTTTGAAATAAAATGTTC ATATTATCCGATCGGCCATTAAATTAATTTACTCTATAAATTTCCTATTT TAGTCACCATGAGCAAAGCTGATATATTGGAGCTAGCTGAACATATCATT CAAGAACGTGAAAAGAAAGAACTTCAAGGCTCTCCCCGTTACGTGCAGCG TCCCTTACCAGTGGCCGATCCGCGCCCCAAGATTGGTCCCCTATCaataa attacagaccagacgaAGAAGATAAACCAGCTAGTAATATGAACACAAAT GGTGAGCTTTATGAAGAGATTCCGTCTGAGGGATTATATTTAACACCGTT AGAGGATGATAGTTATCTTGATTTAACGACTGTAAAGGCGGGACATTCGC CCAGTACAAAAAGTAAACATAGCGAGTACGAGCTAGAGGATGTTTACACT AAAAAGAACGATAATgatcaaaatgaaaacattgaaataaatgGTAAGAA CCAGAACACTACAGATGATTGTAATGACGGTGTTAAGAACGGAGCTGAAA GTGGATATTCCGTACCTCCAAAACGTAACGTATCGGATATCGTAAAATCT TAGACTTGTTtaattttttactattttatgcAAATCTGAGTAAACTTATc atactaaaattaattttaatcaaatttgatattttaaaaagtGTATTTTA ATCTTGGGGGTTTTATAATTTTATCTATATATGTTttgtaaaatgtaaat taaGAAATAAAGACCCGTATTTAtataaagatattttaaaaCCCTTGACC ACTCCAAAATAGACTTTAATTAACGAGCAATTAACTTTGATAGGTTTTTG GGTGTTTGGGGTTTAACtctcgttttttttttgaaaactccaCTTCCCAG A
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003079TCONS_00003079Clytia hemisphaericatranscript
TCONS_00003080TCONS_00003080Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003079-proteinTCONS_00003079-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:133088..140688 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.07 0.07 0 30.1 21.57 19.53 21.29 14.89 26.26 11.85 12.43 15.44 13.98 7.42 6.11 7.1 12.75 14.6 14.53 2.17 1.76 0.1 0.09 1.65 1.32 1.07 0.31 0 0.04